SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30588_c9_g5_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_cadherin-23_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:18.38 TPM:24.48
ORF EntryO_BomoN4EE13162_complete:A_BomoN4EE_TR30588_c9_g5_i1
Sequence
(Nucleotide)
AGTACCGTTAGTGGATCGGGAGGAACCGAAATGACGTGTTTGGGGCGACACCGACTTTTT
ACCATTCGGTCGCAGGATCGGGTATGTAATTTCTGGCGGCCACGACAAGAGGGTTTTCTT
GTCGTGCCGGCTTCTCAAAGTGGCGCGCTGATGCCGACTGAATATACTTATTGATAAGAG
TCAAGCTCCAGGTCGTCATGTGGAGATCCACGTTCCTCATGAACCACGGTGCTCTGATGG
TTATCCTGCAAACAACGGGATTGAATGTCTTGAAGGGGTTTCAAATTAATGCGGCCCGCG
TGAGCGAACATTACCTACACGCATGGATCATGACCGGGTGTATGCGAGTTTTGTAGTGTT
GTCCAAGGGCTACAGTAACTAAAATCACGTCGTGAACTCAACCCAAAAATAAGCGTTAAT
AATATTATGCAGCTTGTGCGTTGATCTAACTAAAATACTAGGTAATGAAACGCCACTGTT
ATCAATAGAAAGTATATTTAAAAACGGAATTAAGTACAAGGTACACAAATTACAAAGGCA
CATACGCAACACTATAGTAGCCTAAAGATAAGTTTATAGTTCAGTCGTTTCCATATTTTT
CGCGTTCTTCAATTGTTCCAATTGTTGGTACAAATCACTGTTCGCTTGATTCGTTTGCGG
TTCAGTTACATTGGAATCAATAGAAGGGAAAGCGGCCGTTGTTATGAAATAAGGTTTTTC
ATTTGACAAGTCTTGATCGACGGCGTTTTCGTCTAAGGAATCTCTTTCGGAACGACTTAG
TTGGTCGTCTGATTTGTACCAGTCGTTTTCGTAAGCGTGCAGCCAAATAGGGTTAGAGCC
TTTGGTGCTGTGTTTGTTTGTGTTGGGAACTCTGCCCCCGGTGCTCCTTATCGTCATGTC
CGATTCGCCCGGTATCGCGGAAGAGTAAGCAGTGGCGGTGGCTGCTTTCAGTCTTCTTAC
GTAGTCCGCGCGCTGTGATACACACATCATGATGGCGAGCACCAGAAGTACGGCTAGGAA
CAATGTGGTCCACACTAGCCAGAACACAGTTTGGTTTGACGCCATTGTCTCCGCGGTAAG
GGGTTGATACTCCGCTGGTTGTGTATCGAGGACATTGAACTCCTTAAATAGTTCATCGAG
ATACTCAATGTTCTCGTCGACAATCTTCAACACCTGAGACACTTCGAGCACGGAGTGATC
CCGCCCATTAACGAGATGGAGATACAGATCCGTCTTGGTGTTGTCGACGGAGCCGTCCTT
GTTCTCGTGGACGCGCAAGTCGTCGACGTTGACCACGGAACCGGTCACCCGGGCCAAATG
TTCCCGGAAACCGTTGATTCTGTCGCGAACTTCGGACGGATGCGCACGTAAAACGAAACG
CACTCTTTGATCTTCCCGAAGCAGATATATGAATACGTGAGCTTCGTCTTGTAGTCCACC
TGTGTCATTCGCTAATACCTGAAAGTCGAAATATCCTTTCATTCCTTTCTGTGGATCGAA
GTTCAACGACACGGCTCCTGTCTCCGGATTCACAAGGAAAGGCAAAACCGCTAAATTCTC
CAAGCCCTCTGTTAACGTTTGTTTGATATCTCCTATTTGATAGTAGCTAATTTTTGCATT
GTCTCCGTCATCTATATCTATGGCCTGGACTTGCATAAATTCAATTCCGAAATCAGCCTT
AGTCGTGATGCCACCAGTGAAAATTTTCCTCAGGAATTTCGGTGCATTGTCATTGACATC
GTTCACAGTTATGTGAACGGTTAACGTACTGACATAGTCCAAATCCGATGTGTATTGCGG
AATCTTAACGCAGTCTTCTGTCGCGAGAATCGTTAATGTGTAGTTCGACTTTTGTTCACG
ATCCAACGGTTTTAGTGTTGTTAATTTGTGCGTGGTTTTGTGTAAATGAAACGCGTCGTC
ATCATTCCCGTTCACAATGTAATAGCACACTGGCAACACTGGCTCGTCTCCGCGGTCGAT
CGCGTCGCGTTCTATGACGCTCGGCAGGAACACGCTCTCGCTTCTGTCGTTCTCGGTGAC
GTTCAAGCTGAACGATTTGAACGGAAACCTCGGTCTGTAGTTATCGACGTTTTGAACGTA
AACCGTCAAATCCAAATCGGAGCTAAGCGGTGTTGGCAACCCCAAATCGTAGGCCTCTAT
CCTGAGCTGGTATGTTGTTTGTTTGTCCCTGTCGAGTGGTATGAGGGTGCGTAGGGCGCC
GCTTGTGGCGTGCAGGGAGAACGCTCGCCACGAGCCCCCCGCGTCCCTCCTTAGCCGATA
GCGGACCGCACCGTTCGGTCCGATGTCGGCATCTATAGCTTTCGCCTCTATTATCGTTGT
GCCTATCGTCGCGTTTTCTGGAACTTTAATCGTGACGTTTTGCTGAGGATGCACAAACAC
CGGCGCGTGATCGTTGTAATCCGTGACGCAGACCCTGAGTTCGCCCCGCACTGCGTTGGC
GGGCGTGCCGAGGTCCCGCGCCTCCACAATCAAAGTGTAATTCCCGAAACGATCTTTTAG
CGATTGCCTTGCGAACAGTCTGCCTGTGTTCGCGTCGCCGCCAACTTGCTCGAAACGAAA
CAGATCCTGTCCCTTCCCGGCCACAAGATGAAATTGTACCCTTCCATTAGGCGTCGAATT
ATCATCCGCGTCCGAAGCGGACACAGAGACTATCGGTTCTCTGTGATTATGGAACTCAGT
GATGGTAGTACAGTCCGGCGGTACGTGCAATATTGGCGGATTGTCATTTACATCTTCTAC
GTGAACGACAATCTGCTTAAAAGCATTACGGCTTTCCCCGCTGAGGTATCCGAACTGATA
GTTGTCCCAAGCTTCCACGACCAGATTGTAAGTCGCCTGTGATTCACGATCCAACCAATC
TGATATAGTCAACGCTCCGGTGTCGCCATTTATTAGAAATTTTCCCTGCGTAGACGTTCT
ATCGAGGAGGTAAGTGATCTTGCCGTTTTCCCCGGAGTCCGCGTCTCTAGCGGACACCAC
GGCTATCACTGTACCCGGCTCGGCATCTTCCCTTACTCGATATTCAAAAGCAGACGACTC
GAATACCGGATTGTTATCGTTCTCATCCAAGACCTGTATGACTAAATCTACCACAGAGTA
CCGTGGTGGTATACCGCTGTCCACTGCTTTGACGGTAAGATTGATCCACGGATACAGTTC
ATGGTCGATTTTATTAGCAACAACAAGTTCTCCTGTTGTACTTTCCATGTGGACCATATT
CAAATATTCTTCGCGACCTTCAACAAAGTAAACCATCGTCCTATTTCTATCCGCGTCGTC
GGCGATAACATTTACGATATTCACACCGTTTTTCGAGTTTTCCGTTATCGATGTTTTGTA
AAACGGCTTTCGAAAAACCGGATTATTATCGTTTTCATCATCAACGGTGACCGTTAGTGT
TCCAGTGGCAGTTTGTCGTGGGCCAACGTCTAAAGCGGCCATGTCTTCAACTGTTATGAC
TAGTTTGAATGTTTCGATTTTCTCTCGATCTAGCAATCTGACAACCCTTAAAGTTCCGTC
GACGGCGTTCAAATCCCACAAATTCAAAAAATCGTACTCATTAATCGATATCGGTATGCC
GTCTTCGTTTCGGGCGACACTATTAGCTTTATCGATACCAAATCTCAGTACTGGCTGGTC
GTCTAGATCGAATGCCTTGGCTCGATATATTTCTGTTCCAACCTGAATGTTTTCACGGAC
TACAACGGATCCCGGCTCAACGAGAACTGGTGGCTTGTTGTTTACGTCAACTATGGTGAT
ATTCACCAAAACAGCTGCGCTCAGTTGTTGATCTCCAATGCCGCCATCGAGTGCCACCAC
TGTCAAAGTGTAGTGCGTGCTCTTCGGATTAGTTTTGTCCGGGTCTAACGTAGAGCCATT
AGCGACCGACACGACTCCAGTGCGCGAGTCTATGACGAACTTGTCGCTGGCGCCGCGCTG
TATGCGATAAACTATACGATTATTCGGCGACGATCCGTCTGCATCTCGCGCCTTTACATC
GAGTACGCTAGTACCGCCAGGCATGTCTTCAGGTATGGACCGTTTGTACATAATCTGCTG
GAACATTGGCGCGTGATCGTTAACGTCTTGTACGTAAATTGTAACGGGCACCGTAGACGA
AAGGGACGGCTCTCCGAAATCTCGAGCTCTAACAGTTAAATGTATGGGACGAATGTTGCC
ATTACCGCCCGGTAATTGTTCAAAGTCCAATCCTCCTTTTGGTGTTATTATACCCAAATT
CGGGTCTATGGTGAAATTATTTTTGTAGTTGCCTCCAACAATCGAATATTCTATGTGACT
ATTTTTTGTACCATTTAAGTCGATGTCCCTGGCTTCCAAAAACAAAGGAGTTTCGAATTC
AATTTCATTCTCCAGCAGTCTAGCTTCGTATTTATTAGCTAGAAATATTGGGGCGTTGTC
GTTGACATCTTCGATGTTTATAATTAATTGAGCAGTATTACGGTTGCCCTTTCCTAAGTC
GTCTCTTGCTTCAACGGTGAGGTAATGCCGCGTAATCAGTTCGCGATCGAAACTGTCTCC
TCCAGCTTGTTTTACTGTGATCACCCCAGAAATAGGGTTAAGGCTCAATAAATTAGCAAT
GCTCCCTCCCAAGTTAGTGTACCGTATGCCTCTGGTTCCATAACTATCAGAATCTTTGTC
CAGAGCCTGTACCCAAGCTACTGTTGTACCGACACCACAGTTCTCTGGTATTGTTACAGT
GTACAATGATTCTGTGAACTCTGGAAAGTTGTCGTTCTCATCCTTTATATGCACTGTGAT
CGGAACTATGCTCATTTTTGGTTCTTTGGTAACTATTTCTTTGGCGACTAGACTGAAGTT
CATAACTGTTACTTTTTCATAATCCAAGAAAGAAGGATCATTCACTCTTATAAGAAATGA
TGCTTCATTTATTCCTTTAAAAGGTGTTACGTCAAATACTCCATTGTCATCAATAAGGTA
CAATTCAAATGTACCATTCTTTCCTTGATCATAATCAAAGACTTCTGGTATGGCATCTTG
CAGTAATGTGATGGGTGTACTTTGCTGAGCATTCTCTAACACTTCTCCAACATATCTAGG
ACTTCTGAAACTTGGTGTTTCATCATTCACATCTGTTACTATGATTGTAACTTCAGTTGT
GGCACTTGGCATTGGTGACACTTCATGGGATTCTTCTGTGGCCAGTATTTCCAATATATA
AGCTCCATTGCTATTATTAGGATCCTCTCTATCAAGCTGGTTGACGGTGTATACAATTCC
AGAACTGCTATCAATGTCAAAATTCTCTTCACCACCTGATATGATGCTGTATGAGATACG
GTTATTGATACCACGGTCTCCATCAATTGCTCGCACTTGTAGTACAGCTGTACCAACTGG
CGCATCCTCACTGATCCGTGTTACTGGACTGGCCACTACAAACTCAGGAGGTTGATCCTC
TACGTCTTGAACTTTAATTAATATAGCAGCAGTCCCAGTGTTCACTTTTCCTTGATTCGC
TCGGTCAACAGCAAGAACCCGCAATTGGTACAAAGGTTTGCGCTCATAATCTAAACGATT
ATTAAGCCGGATTACACCTTTCCCGTTTACTGTTTGTACGGCGAAGTTTTCGACATCACC
ATCTAATTCTTGAAGATAGTACAGGACTTGGCCATAAGCTCCCTCATCGAGATCAGTGGC
CTCCACTGTAGTAATAACGCCGGCGGGAGAATTTTCTTTAATGGTTATTGCGGAGGAATA
AGGCTTGAAGACTGGTTCGTTGTCATTAACGTCTTCAACTAGTAACAAAAAACTTTGCGT
GATGAAGTTTCCTTCTCCCAAGTGTCCATCCGTCAGTGTCAGGACAAAGGAGTACTCATC
GCGTATCTCTCTATCTAATTCCTTAACTAAATATATATTAGCTTCGTTGGCTGAAATGGC
TTCTAATCTCAATATTTCACTCCCAGGTTGCTCTCTTATACCAAACTTTAATGTATCCCC
GTCGGGGTCAACGCCCCTCAGTCGGTAAATTAGACTACCAACAGGAGTATCGGGTCCTTC
TTTCAATCTCACAACAATTTCCGACTGCCCATCTATAAGGAATCTCGGAGGTCTGTTCGC
CGCTACTCCACCTATTATTAAAACCAACCAGACCACCCATTTGTACTCTGCCAGCTTCAA
GCGGACTCTTGGAGGCGCCCTCGCTCTCATGCTTGTTAGTCATCTGACAGATCGATCCTT
ATTGTTTGATGAGACAAAAAGCATTTTCTTAGCAGTTTTCTTCGCACGATTTCGCCGTGA
GAAGACGTGAGCCGGTGAAAGTGTCACCTCGTGACTCTGAATGCTTAATTTCTGCTACGT
GCCGATCTTGTCGCTAATACCTGGTCGAAGATGCATATAAAAACAAAAATAATTGGCTTT
CGAATTTAAAAATTGAACAGTGTAAGGTCGATGATTCACTGCACTTCCGTCGCGGTTCAC
AGGTACGCGTTTCGGTACGCGTTCTCCGACAGGTGTGCGGACCACGCGATGTCACGACTG
TCTGTGAGCCGAGTTTCCCACT
(6562 bp)

- SilkBase 1999-2023 -