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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30585_c0_g1_i4
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:7.26 TPM:9.67
ORF EntryO_BomoN4EE13119_5prime_partial:A_BomoN4EE_TR30585_c0_g1_i4
Sequence
(Nucleotide)
ACTCTGAGATCACATCAAAAACGTAATGAGAAAAATAATAATTTAATGTGTGTTCAGATT
ATAGATCCACTGAATGTCAAGGAAGCCTTGTCGGGCCCTGATGCCCAACATTGGAAACGA
GCAATGGATGAGGAGTATCAGTCCTTATTGGAAAATAATACGTGGGAAATGACTTCTCTA
CCAGCTAACAAGCGCCCTATACCATGTAAGTGGGTGTTCAAGAGAAAGACCAATGAAAAT
AGAGAAATAATAAAATACAAGGCACGTCTTGTAATTAAAGGATGTTCACAAAAACCTGGA
ATAGACTACACTGAAGTATTTTCACCGGTAGTAAGACATGCTTCATTGAGGTATTTGTTT
GCCCTGGCAGTGAAATATGATTTAAATATATGTCAGATGGATGCTGTGTCAGCTTTTCTT
CAAGGTGATATTGAAGAGGAAATTTACATGATGCAGCCACCTATGTATGAAAATGGTGAT
AAAGTATGTCGACTGAGAAAATCACTGTATGGATTAAAGCAAGCCAGCAGGCAATGGAAC
AAGAAACTAGATTTTACATTGAAGCAAATAGGTTTGTTACAGTCTATATTGGATCCTTGT
ATTTATTACAAAATTGTCAACAATGAAAATATGGTTTTCCTAGCGGTCTATGTCGATGAC
CTGATCTTGTTTTCAAATAATCAAGACTCAAAGCAAGAAATCCAAGAAGAATTATATAAA
AAGTTTAAAATAAAGGATCTGGGTGATATAAATTGTTGTATTGGAATACATGTAGAGAGA
GACAGGCCAAGAGGCATTATTTATTTGGATCAAAGAAAGTACATTGAAGAAGTGTTAAAT
AAATATGGAATGTCAGATTGTAAAACTGTTAATACTCCTATAGATATGAACACAAACCTA
CAAAGTAAATCTGAGGAGAATAAAATCTTAAATGATATACCTTATCAAGAGATTATTGGT
TGCTTATTATATGTTTCACATATCACCAGACCAGACATATGCTATGTCATAAATATGTTG
AGTAAATATAACAACAACCCTGACATGCGACATTGGACTGCCCTCAAGCGCGTCATGCGC
TACTTAAAAGGTACTCTAGATTATAAATTGAGTTATAAGAAAAATCTAGAGGAGACAATG
ACTCATGGTTACTGTGATGCAGACTGGGCAAGCGCTGAAGATGACCGGCGCTCCTGCACA
GGTTACACATTCTTGTTCCAGGGAGGAACAATTAGCTGGAACTCCAGGCGACAACCTACT
GTAGCACTTTCCACGACTGAGGCGGAGTACATGTCATTGTCGGCATGTGTACAAGAAGCT
ATGTGGCTGAAGCAGTTTCAAGAAAGTTTTTGGCCTCAGTTGAAGAATGAGGCCTTGGTG
ATCTATAGCGATAATCAAAGCTCTATAAATCTCTCAGGTTCTGATGGATACCATCCTAGG
ACCAAACATATTGATGTGAGGCATCACTATGTCCGCAAAAAGGTTCTGGAGGGGGCCATT
GAGGTACGTTACATGCAGACCGACAAGATGATTGCAGATGCTCTCACTAAAGCAACATCC
CACACGAAACTGGCCTTCTGCTCATCTAGGATGGGATTATGTTTAAGGGAGGATGTTGGA
GAATTGTAAACATAATTTATATTATCTGTAATGTCAAAAATGGTTCACATTTTTGCTCAC
GTGTGACGCCACCGTCCTTCCTTTTCCTAGCGTGTTTCATCTTGTTACTGTTTGCATTAA
ACCGTTACATTTTTTATTCCGGAGTATTATTTCAACAATAATAATAAAATGTACGTAAGG
GCTTATTTCTAGCAACATTAACCACAATTAACTTATTT
(1838 bp)

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