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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30585_c0_g1_i2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:4.05 TPM:5.39
ORF EntryO_BomoN4EE13117_5prime_partial:A_BomoN4EE_TR30585_c0_g1_i2
Sequence
(Nucleotide)
AAGAAAGATATTAAAGCTAAGTCAAAGATCATTTTGTTGGTGGAACCGATTAATTACATC
CATATCGAAAATGCAAAAACATCAAAGGAAGTATGGATAAACCTTCAAAATGCTTTTGAG
GACTCCGGGCTGTCAAGAAAAGTTGGTCTATTAAAAGATTTAATAAATACTTCACTCGAC
AATTGCTCCAGTATCGAAGATTACGTGAATAAAATTATGAGTACCGCACATAAATTAAGA
AATATTGGTTTCGACGTTGGTGACGAATGGCTTGGAACACTCATGCTGGCGGGTTTACCG
GATAATTACAAACCTATGATCATGGGTCTGGAAAGTTCCGGCATTATCATTTCATCAGAT
TTTATAAAAACAAAACTTTTGCAGGAAGTGAAAGTTTCAGAGTTTACTGCATTCTTTACG
AAGCACAGAAATACCTCTAACAATAATTCAAAGCCAAAAGGAAAAGGCCCCCGATGTTAT
AACTGTAACAAATATGGACATTTTAAAAATCAGTGTACAGTGAAGAAATCTAATAATCAT
AACGGTTTTTCAGCAGTTTTTTCAGCGTACACCACCCTACATCAGGACGAGTGGTTTATA
GATTCAGGTGCTACCATGCACATGACAAGATGTTCTGAATGGATGTATGATTTACAACCA
CCTCCGATTACAAAAATAATGGTGGCAAACAGTGATTTCGTCTCCGTGCAAAGTATGGGT
AATGTAAACATTCAAACCAATCTATGTAAGGAAAACTGCCCTATCCAGATTAGAAATGTT
TTATTTATTCCTGAGCTAAGTACAAACCTGTTATCGGTCAGTCAGTTGACAAAAAATGGC
TGTAAAGTAGAATTCACTGATATGGGGTGTAACATATACAATACCAACAAGGTCCTCATA
GCAACTGCCCAACTAACTAATAACATGTACAAACTCAATACTATTAAAGGCAGTGCTTAT
GCTGTTTCATGTAAAAGTAGGACAGATATTGTTACATGGCATAAGAGAATGGCACACTTG
AATATAGCTGATGTGAAGAGGTTGGAGGTATGTGCAGATGGTATTACTATAACAAATAAA
GAAATTGATGCAGTTTGTAAATCATGTTGTGAAGGAAAACAAACACGACTACTGTTTCCT
CAATCTGGTTCGAGAGCAAGTACTTTACTAGAAATAATACATACTGATCTATGTGGTCCG
ATGGAGACACCATCAGTTGGTGGTGCAAGGTACTTTGTAACCTTTATAGATGATTATTCT
CGCAAAGTATATGTGTACTTTCTAAAGAACAAAATGGATATTAAATCTGTGTTTGCACGA
TTTAAAAGTGAGGTGGAAAATGAGTTGGAAATGAAAATCAAAATGTTAAGAAGTGACAAT
GGAAAAGAATATTGTAATAAAGATTTATCTGATTTTCTAGCAGCTTCCGGCATCAAGCAC
CAGACCAGCGCTCCCTACACGCCTGAACAAAATGGACTTTCTGAAAAAATGAACCGTAGT
CTGGTGGAGCGAGCAAAATGCATGCTGTTTGAGGCAAAACTGCAGAAAATATATTGGGCC
GAAGCAGTAGCTACTGCTGCTTATATCATTAATAGATCTCCATCACGAGTTCTGGCTGAG
GTAACACCTTATGAAAAATGGACTAGTAAGAAACCAAACATTTCACACTTAAGGATTTTT
GGCTCTAAGGCCATGGTACATGTTCCGAAGCAAAATCGTTTGAAATGGGATCGTAAATCA
CAAGAATTGGTTTTCGTAGGTTACTGTGAGAACACAAAGGGGTACAGATTAATTGATCCT
AATAGTAAGAAGGCAGTGATTAGCAGGGATGTGATATTTATCGAAAGTCCCATAGATAAT
GTCACTCAGAAACCTAGCCTAAAGCCTCAGCTTATTACTTTACCTCTCAGTTCAAGTTTA
AGTCGCGCACAAAAAAGCAATGAAATATCTTTGATGCCGGTTGATGATAGCTCTCAAACA
GACACTGAAAATGTCACATCAACACCTTCAAGTACTGATACTTCTTTTGACAGCTGTGTG
GTGAACAGAAATTATGATGAAACTTATTATCCCAGCTCAAGTGACAGTGATAACAGTTTC
GGGAGGAATATAACTCTGAGATCACATCAAAAACGTAATGAGAAAAATAATAATTTAATG
TGTGTTCAGATTATAGATCCACTGACTGTCAAGGAAGCCTTGTCGGGTCCTGATGCCCAA
CATTGGAAACGAGCAATGGATGAGGAGTATCAGTCCTTATTGGAAAATAATACGTGGGAA
ATGACTTCTCTACCAGCTAACAAGCGCCCTATACCATGTAAGTGGGTGTTCAAGAGAAAG
ACCAATGAAAATAGAGAAATAATAAAATACAAGGCACGTCTTGTAATTAAAGGATGTTCA
CAAAAACCTGGAATAGACTACACTGAAGTATTTTCACCGGTAGTAAGACATGCTTCATTG
AGGTATTTGTTTGCCCTGGCAGTGAAATATGATTTAAATATATGTCAGATGGATGCTGTG
TCAGCTTTTCTTCAAGGTGATATTGAAGAGGAAATTTACATGATGCAGCCACCTATGTAT
GAAAATGGTGATAAAGTATGTCGACTGAGAAAATCACTGTATGGATTAAAGCAAGCCAGC
AGGCAATGGAACAAGAAACTAGATTTTACATTGAAGCAAATAGGTTTGTTACAGTCTATA
TTGGATCCTTGTATTTATTACAAAATTGTCAACAATGAAAATATGGTTTTCCTAGCGGTC
TATGTCGATGACCTGATCTTGTTTTCAAATAATCAAGACTCAAAGCAAGAAATCCAAGAA
GAATTATATAAAAAGTTTAAAATAAAGGATCTGGGTGATATAAATTGTTGTATTGGAATA
CATGTAGAGAGAGACAGGCCAAGAGGCATTATTTATTTGGATCAAAGAAAGTACATTGAA
GAAGTGTTAAATAAATATGGAATGTCAGATTGTAAAACTGTTAATACTCCTATAGATATG
AACACAAACCTACAAAGTAAATCTGAGGAGAATAAAATCTTAAATGATATACCTTATCAA
GAGATTATTGGTTGCTTATTATATGTTTCACATATCACCAGACCAGACATATGCTATGTC
ATAAATATGTTGAGTAAATATAACAACAACCCTGACATGCGACATTGGACTGCCCTCAAG
CGCGTCATGCGCTACTTAAAAGGTACTCTAGATTATAAATTGAGTTATAAGAAAAATCTA
GAGGAGACAATGACTCATGGTTACTGTGATGCAGACTGGGCAAGCGCTGAAGATGACCGG
CGCTCCTGCACAGGTTACACATTCTTGTTCCAGGGAGGAACAATTAGCTGGAACTCCAGG
CGACAACCTACTGTAGCACTTTCCACGACTGAGGCGGAGTACATGTCATTGTCGGCATGT
GTACAAGAAGCTATGTGGCTGAAGCAGTTTCAAGAAAGTTTTTGGCCTCAGTTGAAGAAT
GAGGCCTTGGTGATCTATAGCGATAATCAAAGCTCTATAAATCTCTCAGGTTCTGATGGA
TACCATCCTAGGACCAAACATATTGATGTGAGGCATCACTATGTCCGCAAAAAGGTTCTG
GAGGGGGCCATTGAGGTACGTTACATGCAGACCGACAAGATGATTGCAGATGCTCTCACT
AAAGCAACATCCCACACGAAACTGGCCTTCTGCTCATCTAGGATGGGATTATGTTTAAGG
GAGGATGTTGGAGAATTGTAAACATAATTTATATTATCTGTAATGTCAAAAATGGTTCAC
ATTTTTGCTCACGTGTGACGCCACCGTCCTTCCTTTTCCTAGCGTGTTTCATCTTGTTAC
TGTGCATTAAACCGTTACATTTTCTATTCCGGAGTATTATTTCAACACGATTTGAAGAAA
AAACATCGATCTGTTTTTGGTCTTGTTGCAAATTTCTGTAGGTAAAAGTTAGTAACACAT
TATTTGTAGTATCGTTGACTTTGGGAATAAAATGATCGTTGTATTTGAATCGATTGTTGC
GACTGCTAATGTATTTCAAATCACGTCAATGCATCTTAAAATAAATTCGTTGTATATTAC
TAATTTATAGTTTAGTTAGTGCCTTCTTGACAGCAACTTTGCGTTATGGTTTGATGGGTG
GAGCAATAATAGTTGATATTCTTCTCCTTTTTTCAGTATGAAAATCGGCCTCTTGCGGTA
CTATTCTTGCCACAGTGTAAAGTTTTTAAACAGTGTCAAGCTGTTTAAAAACTTCTATGT
ATAATAGATATTCTGAATAAGGTGAAGTAGATTTATTTGAAATTTGTACGCGGCAAACAC
GCTGCATGAACTCGGACATGGGACAAGTCCTCTTATCATGGTGCATAGGGATTTGGAATG
AGTTCTATTACCGGCCCTCTTTCTAACTTGGTATTTGTATGATTATTTACAATAAAGTTT
TGATTTTTAAATATTAAACGATAAAACATAACTTTTTATTTCTTTTTGTGTATACAAAAA
AGTGTTCCGTGTTTGTAACCGAAGAATTAAACAAAATA
(4538 bp)

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