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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30582_c6_g1_i5
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:4.98 TPM:6.64
ORF EntryO_BomoN4EE13054_complete:A_BomoN4EE_TR30582_c6_g1_i5
Sequence
(Nucleotide)
ACGGAGAGGTACGTATTAATACTTCTATTCCAAACTTGAAATATGCAGTCGAAGTCCATA
TATAAGGATCATCCCATCTTCCAACCCAGAAGACATGGCGGCTAACGCGTGTCGTCGCAT
CGTACAATAAATAGGCAAGAATGAAGAACATAGGTAGATTGATTCAATGCTTGAGTAGTT
CAGCGACTGCGTTAGCGTCGTTTTCCAACTACGCTCTGTGTGTTGCACTCGTTATCCAAC
CACAGCACAGTCTCGACACTGAGATACTTTGCAATCTTAAAATGATCTACACGTGTTAAT
GTTGTCGTAGGAAATACAGTTTTAAATGAACTACACGATTGATGGCTTAAACTAAGGTTT
ATAGTTTAAAGAAGGACACTCTGATAATGAGAGTTTTAACTCGGAGACGGTTAATGTGAG
CGCGCGTCGCTTCGTCAGTCGGCAAACCGCCCGGGCGGGCGCCACACGACCGGAATCTGC
GCGAGCGACGAGCGGTGCCAACGAATATAAATTTCAGTGAAATAAAACACGCATCCGCGT
ACCGCTGTAACGTAAAATGCGAGCGCAAGATTCTGTGAATCAAATACGAGAAAAGTGAAC
GAGCCTCGAGTGCAGAGTACGACGCCACACGTCGCACTACGAGAGAGCGATTAGGGTTTA
TATAACTCCAACGACGAAAACGATTCGAGCTTCGTGCTGCAGAAACTCTCAGCCCCTCGA
AATATTGTATAGAATCGCTCGGTGACTGCCAGGCATTGACACATCACTGCACTGCTCTTG
TATGATAAACGTCTTAGAAATAAAAGATTAAAAAAAAAAAAACGAAAAAAATAATATAAT
ACGAACTAACGCCCTCTCGGTGGCCACGAAGAGGGATATTTATTATACTTTATTATTATT
ATTATATATGCATATATAAATCGGAGAAAAGTGATCTCTAAAGTGACGTCACAATATTAA
TTGAATTGTGATCTTGTTAATTAGTTAGCCGTGTCGCATTTCGTATTGCCCGTATTTATT
GTAGTTAATATTCTTTTATTATCGTTGTAAATATCAACAATATTTATATGTTACATGTGA
CATCGCGTTATACTATAATACTAGTCATCGATCTAGTGTGTGTTTATTGTAAAATCATAA
TTTAATTGTTACTAAAAGAAATTATTAACGAAAACTTCGGTCGAGTGCACTGAAGGCAAG
AAGGGAATTCGTGTTTGAGAGCAAGTTACGTAACTGTCAAGATGCAGACTCAATTAGAAT
CAGGCAATGATCTGCAGAGGAGCTACAGGATCCAGGACTTCGCCACGCCTGGCGTCATCA
TGAGGGAGCGGAGCTTCGTACGTCCTCAGTCGCATCACAACATGCATCATCACCAGTTTT
CAAATAATGGGAAACGACGGAGTATGATCCTCACCAACGCAAAGGGAAAACCGACTCTAG
AAATCTACAGGCCACCAGGTGTCCGCACAGACGGCGTGGTGTCAACGAACGCTGGTGCCG
CCTGTACGACCACCACGGCGGCCGGCAGTGGAGCTGCGGCCACCAACAAGCTGAATGTAC
ACGCAAAGGAGTTCACAATGGCGAAGCCGATTGACCTACACAATAGAGGGGCATTGGGCG
TGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGCGCAGGTGC
CGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTCCAGCGGGA
ACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGACTATCATTC
CTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAGCATCCGTC
CACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGATGCACTCG
CAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTACATTCCCGC
CGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTGCGCCCGTA
CCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCGGTACGCGC
TGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAACCTTCCTCG
AGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACAAGCTGTTGGGCGCGA
TGATCGGCGGTGGTCGACCTCGGTTGATGGCGTTCCTGTCGTTCTTGCTGGAGATGTACT
GCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGCCAGCGCCCAGCCCGGGCACGTGC
TGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCAGGCAGCCGGTGCCTTCTGCTA
GTGATACTGAGAATCTGTTCTTCGTACTGACGTACATAGGCCGAGACTTGGAAACTCAGC
TACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCGTGACGCTTTCCTCAATACTGCCG
CGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTTATAGAGCTTCACGCATCCCGGTGGC
AGTTACCAGGATGCGCAGTTCTTTATTACTATCCTTCGTCCAAATAGCACGCTGTGCAAG
GTGGTAGGTTGCAATGATATTGTCATCCATATAAACCGTAATTGAGCAATTCCAAAATCT
CTTCATCGCGAAGAGGTCGAGAGGACGAAGAGGACGAAGGGATTAATTCACGCCGAGCTT
TCTTTGAGACGTGACCCAGACTTGCAGGCCGCTCGGTGGTCGGCGTGCTTGCCCCGCTAC
TAGGCCCACATTCTACGTATAGGGCAGGTGATGGCACCGGAGGCGTCTCCTGGTCCCTCC
TGGCCAGGGACGGAGCGTTGGATCCCCACATTTCTGATCTTGGGTTTTCCACTACCGGAG
CGAGCACCCTTACCCTCTTCGGGTGCATCGGCGTCTCCATTGCTCGACCCGACGGCAACG
CCTTGATTGGCATAGTGACGAGTGATTCCATTATTAACAATTAAAAAAAATCACCACACT
TTGATTTTCGTAAATGTTTAAATACGTGCGTCCACACTGAAGTCGCATTTCACACGGATT
TCTCAAATAAAATATGTGTATAAT
(3144 bp)

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