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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30582_c6_g1_i13
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.66 TPM:0.87
ORF EntryO_BomoN4EE13072_complete:A_BomoN4EE_TR30582_c6_g1_i13
Sequence
(Nucleotide)
ACGGAGAGGTACGTATTAATACTTCTATTCCAAACTTGAAATATGCAGTCGAAGTCCATA
TATAAGGATCATCCCATCTTCCAACCCAGAAGACATGGCGGCTAACGCGTGTCGTCGCAT
CGTACAATAAATAGGCAAGAATGAAGAACATAGGTAGATTGATTCAATGCTTGAGTAGTT
CAGCGACTGCGTTAGCGTCGTTTTCCAACTACGCTCTGTGTGTTGCACTCGTTATCCAAC
CACAGCACAGTCTCGACACTGAGATACTTTGCAATCTTAAAATGATCTACACGTGTTAAT
GTTGTCGTAGGAAATACAGTTTTAAATGAACTACACGATTGATGGCTTAAACTAAGGTTT
ATAGTTTAAAGAAGGACACTCTGATAATGAGAGTTTTAACTCGGAGACGGTTAATGTGAG
CGCGCGTCGCTTCGTCAGTCGGCAAACCGCCCGGGCGGGCGCCACACGACCGGAATCTGC
GCGAGCGACGAGCGGTGCCAACGAATATAAATTTCAGTGAAATAAAACACGCATCCGCGT
ACCGCTGTAACGTAAAATGCGAGCGCAAGATTCTGTGAATCAAATACGAGAAAAGTGAAC
GAGCCTCGAGTGCAGAGTACGACGCCACACGTCGCACTACGAGAGAGCGATTAGGGTTTA
TATAACTCCAACGACGAAAACGATTCGAGCTTCGTGCTGCAGAAACTCTCAGCCCCTCGA
AATATTGTATAGAATCGCTCGGTGACTGCCAGGCATTGACACATCACTGCACTGCTCTTG
TATGATAAACGTCTTAGAAATAAAAGATTAAAAAAAAAAAAACGAAAAAAATAATATAAT
ACGAACTAACGCCCTCTCGGTGGCCACGAAGAGGGATATTTATTATACTTTATTATTATT
ATTATATATGCATATATAAATCGGAGAAAAGTGATCTCTAAAGTGACGTCACAATATTAA
TTGAATTGTGATCTTGTTAATTAGTTAGCCGTGTCGCATTTCGTATTGCCCGTATTTATT
GTAGTTAATATTCTTTTATTATCGTTGTAAATATCAACAATATTTATATGTTACATGTGA
CATCGCGTTATACTATAATACTAGTCATCGATCTAGTGTGTGTTTATTGTAAAATCATAA
TTTAATTGTTACTAAAAGAAATTATTAACGAAAACTTCGGTCGAGTGCACTGAAGGCAAG
AAGGGAATTCGTGTTTGAGAGCAAGTTACGTAACTGTCAAGATGCAGACTCAATTAGAAT
CAGGCAATGATCTGCAGAGGAGCTACAGGATCCAGGACTTCGCCACGCCTGGCGTCATCA
TGAGGGAGCGGAGCTTCGTACGTCCTCAGTCGCATCACAACATGCATCATCACCAGTTTT
CAAATAATGGGAAACGACGGAGTATGATCCTCACCAACGCAAAGGGAAAACCGACTCTAG
AAATCTACAGGCCACCAGGTGTCCGCACAGACGGCGTGGTGTCAACGAACGCTGGTGCCG
CCTGTACGACCACCACGGCGGCCGGCAGTGGAGCTGCGGCCACCAACAAGCTGAATGTAC
ACGCAAAGGAGTTCACAATGGCGAAGCCGATTGACCTACACAATAGAGGGGCATTGGGCG
TGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGCGCAGGTGC
CGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTCCAGCGGGA
ACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGACTATCATTC
CTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAGCATCCGTC
CACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGATGCACTCG
CAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTACATTCCCGC
CGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTGCGCCCGTA
CCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCGGTACGCGC
TGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAACCTTCCTCG
AGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACAAGGTACGGCCACATT
CGATGTCTAGATATGCTTTTAAATATACAATTTTCAGAAGTTTGGATACACGAGCTCTCG
GCTTTTCCATATCAAAGTTTTAATCACACAGAATGACAACGGGTCCTAGTCTTCGAACTA
GAACAGATGACTATGGAGACGGAGTTGAAATTTGGCAAAATTCTGATGCCCATATGTGCG
AAGTCTCAATATGGAGCATATTTTATATCCGCCAGCAAAATAAGTCAATCGTCAATTTTT
CTTATATGCCAGTCTTCATTTTATTTAAAAGCAATGCACGTCAATGCAGTATCATCAAAT
ACAAAGCTAACAATAGGCAGAAAGTGAAAGTTTTATAGAAGTAAAAAAAAAAAACTAATT
GTTAACTTTTTTCCAGCTGTTGGGCGCGATGATCGGCGGTGGTCGACCTCGGTTGATGGC
GTTCCTGTCGTTCTTGCTGGAGATGTACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACG
GGGAGCCAGCGCCCAGCCCGGGCACGTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGA
CTGCATCAGGCAGCCGGTGCCTTCTGCTAGTGATACTGAGAATCTGTTCTTCGTACTGAC
GTACATAGGCCGAGACTTGGAAACTCAGCTACCTGGAGATTTGGAGCGATTACTTACAGC
CGTCCGTGACGCTTTCCTCAATACTGCCGCGGCTCCTTCCATCAGGCGTACTTTACTGCA
GCTTATAGAGCTTCACGCATCCCGGTGGCAGTTACCAGGATGCGCAGTTCTTTATTACTA
TCCTTCGTCCAAATAGCACGCTGTGCAAGGTGGTAGGTTGCAATGATATTGTCATCCATA
TAAACCGTAATTGAGCAATTCCAAAATCTCTTCATCGCGAAGAGGTCGAGAGGACGAAGA
GGACGAAGGGATTAATTCACGCCGAGCTTTCTTTGAGACGTGACCCAGACTTGCAGGCCG
CTCGGTGGTCGGCGTGCTTGCCCCGCTACTAGGCCCACATTCTACGTATAGGGCAGGTGA
TGGCACCGGAGGCGTCTCCTGGTCCCTCCTGGCTGGGGACGAAGCGTTGGATCCCCACAT
TTCTGATCTAGGGTTTTCCACTACGGGCTCGAGCACCCTTACCCTCTTCGGGTGCATCGG
CGTCTCCATCGCTCGACCCGCCGGCAACGCCTCGATTGGCATAGTGACGAGTGATTCAGA
GGCCGAAGGTCGGGCTTGGTGATGACCACGAACACGTTGACCGCCAGCACGACCACTTCT
GCCTCGACCTGCTGCAGCACGTTGACTGGAAATAAAAAAAGTATGAAAATGCAAAGAATC
CAATCTGAACGGTCGAAGAGAACGGTCAATTCGTTCTTTTTCGTCTTTTTCGAAGTCAAA
AAATGTACTGCCGTGCCGCTGGTCGCGTACGCCCTCGTGCCATTTCTTTTCGAATTATTT
TCAAATATCTGTCTTAGTCTGTCTATGTCGTCCTGTCAGAGGTTGCACGCCACGACACAA
TCACTGGTACAAAATGTAAAAAAATGAAATACTAAATAAAAAAACACAAAAAAAATGATT
AACTTTATTGCCGTATCTTTAATAATTGAGCTTCTGTCATTTTTTACATAAAACCCGGCG
TGTTATGAGTACGTAGTATGGACGCCTATGTGTATTCACATCTTTGAAGTCGAAATTTTT
ACATTTGTGACTAAAATACACGTCCTTTGTAATACTTTTAGTTAAGTTCATTATAATATT
GATCTCATTACAAAAAATCGTTTGGATATTATTAATTTTTCTATTAAAAACGACCAACTA
AAGATGACCGTTAGGTTCAAAAAATGACGAGGCCGTTACTTCAAAGACGTTTTTTTGTCA
TAAAATGCAAATAACATTCACTTCATGTTAGTAAAATATAAT
(4122 bp)

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