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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30580_c4_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_sin3_histone_deacetylase_corepressor_complex_component_SDS3_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016580 C Sin3 complex
GO:0019899 F enzyme binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:9.84 TPM:13.11
ORF EntryO_BomoN4EE12990_complete:A_BomoN4EE_TR30580_c4_g1_i1
Sequence
(Nucleotide)
ACACGAATGATCAAAAAAAAATCGGACCTTTCACTTACACTAAGTAACAATTGTATATGA
CTATCTAACAAAATTGACTTTTTGAAATGACTAAATGTTATACAAATAAGTCGGTTAAAT
TACTTTTTAGTTTTAGTCCACTTTGACGTAAAAGTAAAACATCTTTCTGCTTTAATCAGA
ACTTGTTCCAGTTTCGTTTCTTTTAAGAAGTTTTTATGCCGAATTCTTTATATGAGTGAC
ACAACTGGCTTCAGCCATTTGGTGCCCGTGTCTAGCTCGACGTTACAAGAGCGCATAAAT
TTATTTGTGAAGCGGTGATTGCATTCAATCTGTATGCAACTGTTACGCGTCGCCTCGACT
ATGTCTTACCAAGGATCACCATATTCCGGCCCGGGGGATGAATACGATTTTGAAGACGAT
GGGTACGACGATTTAGACGACTTCAGAGACCGAGAAGAAACCGTCCCACCTCCTGCACCA
GTGTTAGACAGCGACGAAGATACAGAAGAGGCAAGCGAGGCAGAACTACCGAACAACAAT
GAACCTCTGGAAGTTAAAGAACAAATATATCAAGATAAACTTGCAAATTTCAAGAAGCAA
CTGCAGCAATTGGAAGACAGCCTCCATCCTGAGTTCTTGCGTCGGGTGAAGAGGTTAGAA
CATCAGTTACAAGAGAGGTTACGATTGAACAGAATATACAAAGATCACATGTATGAAGTG
GTAGACAGGGAGTATGTCGCCGAAAAAAAAAGCTGCAGCTAAAGAATTTGAAGAGAAGAA
GGTTGAGTTACGCGAGAACTTGCTCACTGATTTTGAAGACAAGAGGAAACTGATTGAGAG
TGAACGACACAGCATGGAATTGAATGGTGATTCAATGGAGGTGAAACCAGTAATGAAGAG
AATATTGCGGAGGCGAGCCAACGAGCCGGCCCCGGCGCCGGAGAAGCGCCGCAAGCCGCT
GGCCACCACGCTCACGTTCCAGCTGGACGAGCGCGACATCGAGGCCGACCTCCGCGCCAT
ACAGCGGACCACCCCGCCCAGGCATCCCGTGCAGCACAACACCGCGCAGCCCAGGAAACA
TCTCAACTCTGGCAGTACATGCGACTCCCCTATTCGGGAGAGCGAGACCTGCGACACTCG
TGTGGAAGACGGCAAGCTGTTGTACGAGAGGCGCTGGTACCACCGCGGGCAAAGTGTCTA
CGTCGAGGGGCGGGACCTTCCAAAGTTCCCCGGACACATCCACGCCATTACAGATGAGGC
GATATGGGTAAAGAAGACGAATGTGGAACGAATAAGGATATACATATCGCAGTTAGCGCG
CGGTAAAGTGACGTTAAAACGACGAGCGTCGTAATCGTTGCGGTGTTACGCGTTACGCGT
TACACGTTACACGTTACGCGTTACGCGCTGTGATACAAGCTGCGTGCAGTGTTACGGGTG
TGTTTGTGTGTGCGGACACTAGGACAAACGCTAGATATTTGTATATATGATTGTATTATA
GTTTTATATCTTGTCGTGACAATGGATTGTAAAGTTTGTTTTGGTCAGAAATGTAATTAT
AATATGCTTACGAGGATCACATATTTGTATAAAAGTGTTGAATTTATTATATGCTGGTAT
CTTTAATTTTGGTTCAGCATTTTTTTTATTGCCTTTGTAGGCAGACGAGCATACGGCCCG
CCTGATGGTGAGTGGTTACCG
(1701 bp)

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