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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30572_c0_g5_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_isoform_X48_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
Transcript
Level		FPKM:4.08 TPM:5.44
ORF EntryO_BomoN4EE12925_complete:A_BomoN4EE_TR30572_c0_g5_i1
Sequence
(Nucleotide)
CGTTAACTTTAAGTGTTGCGCTATGACTACTACGACCGGCTTGATTTTCGGCTATACACG
TGTAATTGCCAATGTGTTCATGTAAGACATTTTCTATGCTCAGCATAGATATTCTCTTTC
CATTTCGGTTTATTAGAATTCCGTTACCGGTATTCAACGATTGGTTATTTAGCTGCCAAT
AAATGTTTAGCGGTAAATCTCCCTTTCCGACTGTACAGGTCAACGAAACAGTTTCTCCTG
CATTCAGAATGTCTTCTCCGAAATCAAAAGGCGTTACTTGCGGGACAACCATGACTTGAA
GTTCTAGGGTTTCTCTAGCCGTGTATCCCTGCGAGTTCTTCGCGACGCAGGTGTATGTGG
CTTCGTCGCTCATGCGCTCAACGTTCTCGATAACAAGGGTGCCGTTGGGGAATACTTTCT
GTTTTCGGTTGATCGGGAGGACTCTTCCATCACGTTCCCAAACAATGGAGTCGATAGGGT
AGCCGGCGACTGGACAGTGCACGATCAGAGTGTCTCCGGCGACGACGGGACGCTTCTTCA
TCGGACGAACGAAGGGTAGACCGTAGATGTTGACACGAGCCGAATGGGATGTGCTGCCGA
CCTTGCTCGAAGCGAAGCAGGTGTAGAGGCCGCCATCGTTGGTCTGCACGGAAGAAATGT
TGAGGTGCGACTCGACGTTGCCGTCGGCCGTAACGAATTGTCCGATCTGAAGTCGTTCGC
CACTGGACAGCTTCTCACCGTCCAAGAGCCAGGCGATGTCGGGGGTCGGGTTCCCGGACG
CTACACATTTCAGCCGAAGAGACGGACCGGAGCGGAAAGTCTGCTCGCCAAAGCTATGCC
TGATTTGAGGCGGTTCAAATCGTCCTCCGAGTTTCAGCTCAGCACTTGCACTTGCGCTTT
CTTGGTCGTTCCTAATGGAACACTGATACATTCCCTTGTCTTCTTTCTTCACAGATTCAA
TTCTTAAGCTTGCGTCATGGTGTTTCATATCTTTACCGTCTTTCAGCCATGTAATAGTTT
TGACGGGGTTTCCTTCATATCTGCAAGTAAAGACAGCGGGTCTCCCGAAGTCTACCGTTT
GAGTGGCGGGCTCTACGGTTGCTTTCAATGGAGCGGTGACGGTTAAAACGGTTTCAACGG
ATTCGCCTCCGACGGAATTATTGACGACACACAAGTATTTGCCAGAGTCTTCAACTTTTG
CCTCTTTGATAATCAGAGTTCCAGATACTTGCTTCACTCTATCGTCAAGTGTGACGGGTT
GTTTGCGTGTTGTGCCATCAATGAATTTGTACCATCAGTAATGACAAGTCGCCCCTTAGT
AGCTGACAATCTAGTTTCTCCAGTCAGTCTATGCTTTGTCCGACATTGGTAAGATTTATA
TCCGTCTTCAGGTCCGACATCACGAATGTGTAACTCTCCAGATGGGAGTACCAAATATTT
TCCGTCTAAATTAGACGACCCGTTCGAGCTTATCTCGATATCTGGATAGTTTTTTTCCGA
TATAGTCCAGGATGTCACAGTCACGTATTCCGAGACAAAACTAGGTATATGACATTTTAG
TACAGCCGAATTACCGCGAAGCACGTTTTCTTCCATTAGGTTTACGGTATAAGCCTGAGA
TACGGCCGCTCGGACATTGACATCACGCGACAGTATAGTTCCTACAGGGTTGCGTGCGAG
ACAAGCATAGACCTGAGCGTGTACTTCCTGGCGGTAATCTTTGGCACGGAATGGCGGGAA
CAACAAGTTTCCATTTGGCAAGACCTGACGCAATCCAGGGACATCTCCTACGGTAGTACC
ATCAGCTCGCACCCAGATGATGTCGGGGGTCGGAGAACCACGGGCAGCACATTCAACAGT
CGCACCGGTCGTATTGCTGAAGTCTACTCGATTCGGGGGTTCCTTCATAAATATCGGGCC
TATGGTTTCATCCTCGCATAGCACTGACCCTAAAGCGGCCAGCGCCACGAGGGCGGTGAA
AATCGTAGTAGCCATATCACTAGCACGACACTTCACTATTCACTTGATTCACTTATAAAC
TTCAAATAAGAAAATCACTGAGACAAAAGAGTCGAATAGGCCGCAATGCGGCCGGGCTTT
GCCCGAATCTGCGTAGAATCAGCGATGGGTTTGCACAGCACCCACAACACATAAACCACA
ACACGCGCGGAGAGACGAGCGGCAACAACCGACTCGCCTAAGCTACA
(2207 bp)

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