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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30450_c0_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_cystathionine_beta-synthase-like_[Bombyx_mori]
Ontology
GO:0001887 P selenium compound metabolic process
GO:0001958 P endochondral ossification
GO:0001974 P blood vessel remodeling
GO:0004122 F cystathionine beta-synthase activity
GO:0004124 F cysteine synthase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006535 P cysteine biosynthetic process from serine
GO:0006563 P L-serine metabolic process
GO:0006801 P superoxide metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016829 F lyase activity
GO:0019343 P cysteine biosynthetic process via cystathionine
GO:0019344 P cysteine biosynthetic process
GO:0019346 P transsulfuration
GO:0020037 F heme binding
GO:0021587 P cerebellum morphogenesis
GO:0030170 F pyridoxal phosphate binding
GO:0030823 P obsolete regulation of cGMP metabolic process
GO:0031667 P response to nutrient levels
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043418 P homocysteine catabolic process
GO:0043506 P regulation of JUN kinase activity
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0050880 P blood vessel diameter maintenance
GO:0051593 P response to folic acid
GO:0060135 P maternal process involved in female pregnancy
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0070814 P hydrogen sulfide biosynthetic process
GO:0071456 P cellular response to hypoxia
GO:0098605 F selenocystathionine beta-synthase activity
Transcript
Level		FPKM:33.67 TPM:44.84
ORF EntryO_BomoN4EE12789_complete:A_BomoN4EE_TR30450_c0_g1_i1
Sequence
(Nucleotide)
ATCCTATATCATCTCATTTCATTACATGCCAATTGACTAATGTTTCAAATTAATCAACTT
CATTTTATTTCGCCCCATATTATCATTTTTCATAAAAAAGAATGTAAAAGATTAGGCTGT
ATAGTATATACCATTGCCTTTCCAGTTGGAAAAATAGAACTGCTACTACTACCAAGTTCC
TGTTGTTGTTGTAGATGTATAATTATGTGAATTAAGAGTGATTTTACCTAGTTTTCATTA
CGTTATAACGGGAATAAAATCAGCGAACACTCAAAAACGACCAAAGAAATATCAACGCTA
GGCAAGATATACAACACAGCGAAATGCCTTTACCGCCGGCGTTAGCTGCTCGTTTAGCTA
AAAGAGGTCTTTTGAAACAAAATGCAGATTCCACCGCTGTCGCATCTGTTGGTCAAATCA
ACGAAGAAATAATTGCAGAAGATTATGATAGTAAGCCTAACGAAAATGGAAAAGATGAGC
CTTGGGAAGGCTTTGTCGATCCTGTCAAAGGCCATCGAGGATGCCCTAATAAAAGTAATA
TTTATCATGAATGTTCTACTTTTTGTATTAAAAGATGGAAGCAAGGTAAACTGGTACCGA
CTGAGACATATTTAGAACACAAGGAGAAAGTTTTAGAGCTATGGCCCTTGCCACCAGGAT
GGGAAGAAGTGTTTGATGAAGGTTATGGTCAACATTATTTTTGGAATGTGCACACTAATC
TGGTTTCGTGGATACCACCCGGACATCCCCGTGCTGTGCCTACGGAATCTGCCGCACAAT
TGCGCGAAGAACGTCTGATGAAAGAAGGCGACGAAAGTGATGAAAGCAGTGAGGCCTCGG
ATCAGGAAGTTCCGCAGATTCAAAAAGATAAGAAACCTGATCGCCGAGAAAGAGAAAAGG
AACATTCACATCATAGAGACAAAAAAAGGCTCAGGGTCAAAGATAATGACTTGGATCCAA
TGGACCCAGCATCTTACTCTGATGTACCTAGAGGTAATTGGACATCAGGTTTAGATACAC
ATTCTAAAACAGGTGTAGATACCACAGCCTCTGGTTCACTCTATCAAATGAGGCCCTATC
CAGCACCTGGAGCAATACTTGCAGCTAATGCAAAACAACATTCTCCACCACCTTCACCAT
AAGACTTTCATTAGATTGTTTGCTATTATAATACGTAAACTCAGACCTGGCAGTTTTCTT
TACATTAACCAAATTAAATGAAATGGTTAGCTGCACTTGTTGTTCTTAATGAATTTGGTA
TGTAACATGTTTAATTTCTAAATGGGTAGAGCATGTAACCTACCCATTTGCAAGTCTTTT
TAGCCTTCTCTGACATTTCTGAAGTTTTATGTATTTCTGCACGAAAGTATGCGAAGTAAC
AATTTATTTTTACAAAAATTCTTTTTTTATTACCCTTGTATGTAGAAGCTCTTGCTTACT
ATTAAGTACTCTCAACAAACCTTTTTTGAATGCCTGGCAAAAAACAATATTTTATAAATA
GGTAATAATAGTCTTAGATATCTCATAATTCCAGATTTAGGTGTCAGTGAAATCAGATGC
ACATAATTTACAATACAAAGTAAAAAAAAAAAATTGTTGAAATTATGGTATTTTATTTAA
ACTTTTCCCATTGTTATTCCACAAATAATATGTTTTATGGACAGAATACAAACTGCATTC
CCAAACACACCATTAACTGACGTTAGGCAGCAGTGTCTTTGATTGTTCCGGTTGATATTC
ACAGTGTAGGTACATATTTTTTATCAAATATCCAAACATAATTGCATTAATGACAAATTC
AAGATGTGTAGACAGTTGAGCATACAGCCCATCTGCTGGCGAGTGGCTACCGTCGCTCTT
GGACGCACCGCCAGGAACACAAGACAGGCTGTTGCCTATCACTGATTATTCTCCACAAAC
GTCATTTGAAGTTGGAGTAAATTATAAGTTTTAACATACAGACAATCAATTAAGTAAATG
TGCTCTCACAGTATAATATCTTCCCACTGCTATATGAAATATAACTAGGTTTTCGTACAC
AAATTATAAGAGTTATTTAATAGGTAGAAATAATGAAATAAAATTCGTTGTGCAATTTTT
TACATATATCTATAACACTTTAGTTACAATACAAAGTCATGTAAAAATGCAAGATATTTT
ATGTGATATTGTAAAAATGTTTCATTTTCAGAACAATCCCATTTTTATGCTTACATTGAA
AAAAAAACAATTCATTTTGAGACTACACCATTTAAACAAAATATAACATTTCTTACAAAC
TAAGAATTTCCATTTACTTGTTTGGTATCTAATGAATACCTGAGAGTAAATCTTCAGATG
TGATTATTCCAACAGGTAGGACAGCAGAGGAAACTGATCTGACGACTACAACGTAGGGGG
AGATGTCGAGCATTCGAGATACAAGCCCTAAGCTGGGTTTGTTCGATAAGTCTACCTTGT
AATACTTTTTCACTAAAAATTTGTCCAACGGATCTGATGTTTTGGCAAGCATATTTGATA
ACTTCTTGCGTACATTGTCAGCAGTTAATAGACCAACTAATGACCCATTATCACCTGTGA
CATTTAGTAGTGGTGTAGGATTTTCTTTCAGTGTTGCAATTGCATACGCAGTCGTGCTAT
AATGCGATATACTTTTTGTTGGTCGAACCATATCTTGCGTTAAATGTTTATCCCACCATA
ATAATTTATCGTTTTTAATCAAAGGTTTGAAGTTACGGGCTTCCATCCATTGATCTGATA
TGAATTTGGTCATATAGTTTCGAATGCTGTCCGGTAATAGCACCACACACTTCTGTCCTT
CTTTAAGGGATTTGGCGGCTTGTATGGCGCCCCACATCGCCGCGCCGCTGCTGCCACCGC
ATAGAAGCCCTTCATCTTTGATGAGTCTGCGAGCAATTTCCAAAGAGTTTTGGTCATCAC
TTTTCACCCATTTGTCGACGACGGTTCTGTCGAGTGTGCCCGGCAAGAAATCGTAACCAA
TACCTTCAACCTCATAAACTTGTACGTCGGATTCATTCAATACTTCAGGCTCGGCGAGTA
TGGATCCGTAAGGGTCGACCCCAACAATAACGCAGTCGGGACAGCGCTCTTTGATCTTGT
GCCCGACGCCGGAGATGGTGCCGCTGGTTCCAGCGCCGATCACCACCATGTCCACGGCGT
CGTCCAGCGCCCACAGGATCTCCTCCGCGGTGCCGTCGTAATGAGCCAATGGATTGCAAG
GGTTGTTGTATTGATCGAGAATAATAGCGTGCGGTATCTCTTTAGCGAGTCGATGCGCAA
CCATGATGTTGCTCTCTGGTGAGTCCCAGGCAGCTTCAGTTGGCGTGCGGATTATTTCAG
CACCCAATGCGACAAGTGTGTTTACTTTTTCATCTGACATTTTCTCAGGCAACACTATAA
TGCACCTGTACCCTCTGACAGCAGCGGCAAGTGCCAGTCCGATTCCTGTGTTACCAGATG
TGGGTTCTACTATGACTGACTTGCCAGGCTTCAAAATACCCTTCTGTTCTGCATCCAGAA
ACATGCGGTAAGCTATGCGGTCTTTGACGGATCCTCCAGGGTTGAGGAACTCGCATTTTG
CATACATTTCACATTTCAATCCTTCATCTTTAGGTAATTTGGATAGCTTCACCAGTGGTG
TATTTCCGATTACATTCAAAATATCTGAATGTACCTTCTGATTTCGATCCAGTGCCCTTA
CAATGTGAGGCATGTCCTTTAGTGTAAAGAATTTTCTCGCAGAGTTCGATGTGCCATTTT
TAGCATCCACATGGTTCGACATGTTGCTGTTTATCGTTTTTATTGCTTGTATTTAAAATT
CACAATTCACTATTGTATCAATTTACACAGCTAGCTTTTCAATTTAACTTTTTTATTTTA
TTTAACCGACGTCTTGATAGAAAATACAGTTCTAATTAAACTAAAATTAAATCGAGCGGT
ATAAATTATTCTTTTGCAGTAATTCACAGTGCGTCAAGGTGCTCTAACCAGGGAGTATAT
AATAACTATGTTTCCTCTTGAATGAAAGGAATTTAACTAAAAGACAAATTAATTGAAGTT
GGATATTTATAATATTGTGTATGAGTTGTAAGATATGTATAGGCACCTACCTACCTAGTT
GTATCTACAAAAAAAA
(4156 bp)

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