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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30085_c0_g2_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat-containing_protein_19_isoform_X2_[Bombyx_mori]
Ontology
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
Transcript
Level		FPKM:6.44 TPM:8.57
ORF EntryO_BomoN4EE12286_complete:A_BomoN4EE_TR30085_c0_g2_i1
Sequence
(Nucleotide)
CTTATTTAATTTATTTAATGGACGGATCGTAATCACAGTTTTTAATTATATCATCATAAA
CACAAAATAACCTAACGGTTTAACAAATCACATTATAATTCAGGCATACATATTATGTGT
AGTGCTTAAAGTTCCGATTACAGTCGCTCTGATTACAGTCGCTCTTGTCTAAATTTTTGC
TTGACATTGAAATGTCGATTTTGAATCTTACTCACTAGTGTTAGAGTCCAAGTAAATTGA
GACATCGTCGATTTTGACCAGCCGCCGGTAGTCCACGCTCTCGTCGCACATCGGACACTT
ACCTTCATCGCGGAGTAATTCTGTGAATTCACTGAGAATGGCTGGGAAGTCGCACTCGGG
ACACGCAGTTAAATCATCTTTCACGATATGCATTCCCGTGGCGAGACAGAAAGGCAGGTC
GGCGCCGCAGTGCGCGCACGCCAGCGCGGCGGCGGGCAGCGCGCGGGCGCAGCGGGGGCA
GGGCGCGGCGCGGGGCGGGGGCGGGGCGCCGCGCGGCACGTGACGCACCACGCACTCTAT
CTTCTTCGAATACTTCGGATCGATCTGAGACCTGAGCTCGGGCTGCATGAGGGCTCTGGC
CCAGCGGTGGGCCTGGTGCTTGAAGCCCGCGCGACTGCACTCGATCACCGTTGATGTCAA
GATCGATACTTGATGTTGAGGCAAAGGGAAGAAGGTGACCTCATCAGCGATGCGCAGCAG
CAGCAGCGCCGCCAGCTCGTGGTTGCCGCGGCGGACGTGCGTGCGAACCAATATGTAGGA
GTGCAGCAGCGCCAGTGCGTGGCGGAGGTCGCGCGGGGGGCGGCGCAGGGCGGCCCGGGC
CCCTCGCAGCACGGCGCGCGCCTCCCGGTACCGGCCGCTGCGACACTCCGCGTTGCATAT
AATCACCGCAGTTTTGGCCGCTTCCATGAACTGTTTCTTGGCCATGTACAACCTAAATAA
ATGACGTGGCTCCCGCGGTGTCCCGTCAGTCTCACCCAACAGAAACTCTATTAACCTCCG
GGTTAGTCGTTCGTCGTCGCTAGCCGCGGCCGCGTCGATGGCTACACTGATCGCCTCATT
CTCGTCTTCTTCGGAGCCGCCGGCCTTCAGCAAGTGCGACATGGCTCTGTTGTAATCGGC
AGCGTGGAAGTAAAACTTTCCCGCCAACAAATGGTTCTTCTCCCCCTCGAAATGCAAGGC
CAAGCTCTTGAAGTCCTCCGAACGAGCCTGCGACGTCTGGATCAGTATCTCGCCGTACAG
CTGCAGCTTCCCGTTCTTCCTGGCCAGCTGAAATGCGTCGTCGTAACAAAGCGACATCAC
TAGGAACTTTATCGCTGAGCTCGAGTCGTCGCTGTTCTGAAAGTAATTGGCGACCATTTT
CGCCCCTTGCACCGATTTCGTTTCTTGAACTAAGTGAACTGCCTCCTCGATGTCTTCAAG
TTTATCGAGATTCAATCGGATGGCCGCTTCGTAATCCTGAGCCTTCAGATACGACTTTAA
TGCATCGTGGTAACGACCTTCCGCCTCCTTTGCTTTGGCGTACTGAATGTGGATGCTGGG
CGAATTGATCTTAGGTAGCAGGGCTTCGACTTTGAGCCAAGATTTCAGTTTGATGTATAG
AGATGCTGCTCGTTCGGTGTTACCCGCGTGATCGTACAAGGCGGCCGCGTGACTGTACTG
CTTCTCTTCCTCTAAGAGTTGAGCGCATTCCTTGAGCAGCGTGACGTCATCGGCGAGCTT
CATGGCAGTGGTAACACCGCGCATGACGTCACCGCAGCGGATCGCAGTACGCGCTATGCC
GGCCTCGCACTTCCTGTTGTGGTCCCTTACTTTCGCGTCCTCTAAGTTCTCGATAATTAT
ACTTTTCTCGTAGTTGGCCAGTGCCTCGTGATAGTCGGCCGTGAGTTCGAGGTGGTGCGC
GTGCTGCGCGGTGACGAGCGGCGCGTGCAGCGGGGCGGCGGCGAGCGCCCGCGCGGCCGC
GTCGCGCCACAAGCCGCGCGCGCACGCCAGCTCTAGGGCCAAGGGCGAACCTTCCGCCCA
CCGAGCCGCCGCCGCGCCCTGGCCCACGCAGGCGCATAGCATGCCACACAGCACCGACAA
ATCTTCAACATGCGCGGCGTCTTCCAGCGCCCACACCGTGCCCACGTCGCTCAGCCGAGT
GTACACACGTATCGCAAATTCCACATTGAGGTCAGCGATGGCCGCCTCACCGAGTCTCCG
CCACACGTCGGGCTCGTCGACCGCGTCGCAGAACAGCCAGGCGTCACTGAACCTCCTCAG
GAGGAGCATCTTCTCGATGTGCTTCCGTTGGTTGGCGACCCGCTTCTCGGTGTCCGGGTC
CGCCAGCCCGCTCGTGTTGTGCGAATCTAATGGAATTTTTATTATGCTGCCCCCGCTTGC
GTAGCAGTACACGTCGCCGGAGAACAGTATGAGAGGGATCTGGCCAGGCAGGATGCTGGT
GCTCGCGACCAGGTCAACGTGGGATCCGTTTATAGAGTTCGACACGTAGTAGTATGTGTC
AATTTTGTCATCCGTGTACACGATAAACACGTTCCGATCCGACAAACAAATATCCCAGAT
GACCCCTCTGAAGAGTTTCGGTTCGCGCAGGGGGCAGAGGTCGTGCGGCGCGGCGGGGCA
GTACACGAGCAGGCGGCGCGCGGTGTCGGCGAGGCAGGCGCGCGTGCCGCTGATGTCGCC
GTACGCGGCGCACAGCGCGCCCGCCGCGCGGTGCCGCACGCTCGTGCGCCACTCCTCCAC
GCCGAAGTGCTCCACGTGACCTTGATCTGTGATGAATATAAAAAAGTCGGCGGTGAGATG
AATGTCCACAATCTTAGCGCCCTGCATGTGCGGTTCTGGAAACATCATGCATTCTCTTTC
GGCCTGGGACGAGTCCGGTTGTTCGATGGTGTGCAGCATGGCACGGCCCTCGAACAGCGC
GGCGGCGTAGTCCCCGGCGAGGCGCAGGCGGTCGAGGGGCGCGGGGTAGCGGCGGGGGCG
GGGGCGGGCGCGGCCGGCGGCGGCCGACAGCGGGTAGAACCAGGCGTCCGAGCCGTGCAC
GCAGCACAAGTGCGAGCCCCCCAGCGCTATTAGAGTCGGCTCCACGGGCAGCGCGTAGGT
CGCCAGAGCTGTCGGCTCCGATTTATTAATAGGTTCGGGGGCATCCTCGACCCCGATGCA
CTGGTAAACCGTGACTTCAGTGAGGCTGGTCAGAGTGAGAGCTCTGGTTCCGTATGTAGC
GTACAGGGGGGGTAGCGTGGTCACGTAAACGTTCAGGTACCCTCGCCCGGAAGTCGCTAG
TAACCTTCCGTCGGAGCTCCACCCGCAACGCTCGGCTCCCCCCGTCGGCATCACCGATCC
ACTCACCTCACCATTATTCCAAACTGAGATCAACTTTAACTGTCCATCCCCACACGAGGC
GGCCTGCCCGTTACACACCGCTATGTCGGTCAAACTATCTTTATGGTTCTTGACCTGAAA
CAATTCTTCGCCGACCTCTTTGATGTGAGTCGATATTGATATGATGAATCCAGCACTGAA
CCCTATAAGAATGTAACCATCGCCATACCATTTGTACGAAACTATGGAACCATAACGTTG
TTGGAATGCTAACTCTATTGGGTTGTCGGGATTCAAAAGATTGTAAAGATATAATGTGCG
TTTCCCAACAATAAGGCTTACTGTATTTTCCCCTGCAACTCGTTCATCTGTCTTCATCTC
AGAAACTTGCAAATCATTAGGAGTATCCCTTAGTGATATTATCCTGAGTGTGTCTCCATC
TGAATTATTTATGGACAATGTCTTATCTTCTGAAGCAAGTATAAGTATGTTGTCTTTATT
CCATACAGCACAACATATCTTTTTACTGTGCTTCCCTATTATTGGAATTCTCTTTGTGGT
ATGATGATTATAAAGGGCTAAATTTCCTTTATGTGTACCAACTGCTAGTAAAGGTTCTTC
GTAAGCCCAAGCAAGACACGAAGGTGGTTCACGCAGGCCCGTCTCAATGTTCAACCGTTT
ATTAGCATGGCATTCCCAAAGTAAAACTGCATTACTATTAGGTGTAATAATGGCTAGATA
ATCTCCATCGTTGTCCCATTCCATATCTGCACATAGTCCCGATAGCTTAATCCTTTCTAC
CAACTGTCCATTTCTATTATGGATAACAACAGTGGCATCCGTACCAGTGGTCGCTAGCAA
TGTATGGGATTCACCCTTCTGCCACAAAAAGTACAACTCACCAAGGCCGTGAGGTTGATC
AATAGAAGATAATAATTTTGGCGCCGTCATAATTAATTCAGCACATTACTTTACACATTG
GCCAACGCTATAAGTTCTACCTACGATGAACACAGAACCAAATATAATTTATTTATTTAA
TTTTGTATTTTTCAAATTTCAATTTTTATGCGTTCGTGACAATGTTTGTTTACAAATTAT
GTCAGATGGGATGTTGCTAGGTAACCAGTACAGATTAATTTTAAATAGTATCCGGAAGAT
GTTCCGATACTATCCAAAT
(4519 bp)

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