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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30082_c0_g2_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0021915 P neural tube development
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045335 C phagocytic vesicle
GO:0061734 P parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1903599 P positive regulation of autophagy of mitochondrion
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:4.09 TPM:5.45
ORF EntryO_BomoN4EE12269_complete:A_BomoN4EE_TR30082_c0_g2_i2
Sequence
(Nucleotide)
GTCGTTTGCGTACGTTTGCCGCTAGGGGCGCTGTTCCAACTGCATACAAAAATGGCTCAA
CTTTTACGCTATCGAGTACGTTAACTCGCACTAAGCACACGGATCAATATTTCGATTCGT
TAAGATTAGTATTGTTGCTCCAAACACGGTAGCTATTTTAATGTGCGGAGCGAATTTTTA
TAAAAGTATTTATAAGTAATGTGCAATTACTAAGAGAATAAGAATCTAAGTGCAAATTCT
AGACGTAATAAAAACATTCTTAAACAGTCACAATAACGTTTAAAATTCATTCTGGACTAC
TAGGACATTGATGGCTTGATTTATTTGTTGTAACGCAATTTTTGAGTTACGTTTCATGTA
AAATTACCAAATTACTGCTCTCAGTCATGAAAATTGACATATTTACAAACAATATTCAAA
AATGGGTCTGTTAATTTGAAATTAGTCAATAGACAAAAATCTTGTTTTTTTTTGTACTGT
TATATTTATTACGCGCAGCGACGTTCGTTATTTTCGATTTTTAATTATTCCAATAATTTA
AGGAGATCATTTAGCGTACAAACTAACCATTTCGTATGGCGCTTAATTAAATTACAACAT
AATTAAAATTTCGTACAACCGGCGATGTAATAAAAATTTACGTTTATACCCTCGCAGTGG
CGTAGTGAGCTTAACTCTGCGCCCGGGACACAATACCTTTTTAGCGACCCTATTTAGACT
ATACGTGATTTTTTTTACTTTTTATTTACGAATTAACATTTATTATATTAGACAGGTACT
AAATTTAAAATATATAAAAAAAGAAAAAAAAAGAATTCAATATTTTTTTTGTTTTGAGGA
CCATTTGGCGCCCTTTTGTGAGTAGTACCCGGAACATGAGGCCCCCCTTGCCCCCTTTGG
CCCCCTCTCGCTACGCCACTGTACCCTTGTCGTGTGTGGCAACGTCAACATCCGTGTTCG
GAGTCGACATTTGCAACGTCATTTCGTACAACGCGAGTTGAGAGTTCTAATCACAGTGCT
CATGTAACATCGTGTAAAAATTTATTAAGACAAATGAGCGTGGACCGGTGAAACAGGGTA
CACTTCTAAATTTATATTGATTCTCTTCTGTTCCTACTTGTTAGTTTTCATGTGGATTTA
TTATAAATTAGGCACTCAAAAGCCTCAGGATGTTATCGACTTAGCTCATGACGATAAGCT
GTCCGGCGTTGTTGGCGTAGACCAGACCCTGGCCGGGCTGGGGGGCCCACCGCAAGCAGT
TCAGACTGGTGAACCCCTGCTCCCAGTTCTGCTCCAGTTCCTTGATCGGCGACAGTCCCG
TGCGACTGGAGCTATCGAGCGAGTCGAGCTTGTACAGGAGAGCGAAGACATGGTTGTGGG
CGCGGTGCGTGGACGTGAAGCGTTTGGAGCCCAGTCCCACGGCCAGGTGCCGCGCCGTGG
GGGACAGCGCCACCGACACGGCCGTCTGCTCCAGCACCGCCGTGTGGAGGCACTGACCCA
AGCGACCCCACTCCAGCGAGTACACCCCTAGCCAGTGATTTGTGTTTCTCATGCGGGGAA
CGGGAAGCAGCGCCACCAGCAGTCTGCCGTCTTTTGAAATGTCGATGCTCGCGTCGTTAT
GAATTCTGCATCTTTGGACTACAACATTTTTTTTTGCCGTCGGCTAGTTCAGGAACGTTT
CCGGTGGTAAAGTCCCAGGCCTGCACGCGGTGCGAGGAGGCAGGCATGGTCTCCGAGATG
ATGCCGGCGTCGAGCAGCCCCGCCATGCCGCCCAGTCGCCGCGCACCCCCCATACCGCCC
GGCCCACCACCCTCTTCTTCCACCACCATCGCGTTCTGGGCTAAAATTATCGGTTGCAAA
TATTCGTGGATTCTCGGCAGCCTCTGCGTCGGAGCGTTCTGGCCATCTCGTTGCGCCTGT
GCGTCCTGTGCTTGCGCCGGTGGTGGTGGCGGTGGTGGTGGCGCTGCGTTGTTGGCAACA
CTGTTGAACTGAGGGGGTTCCTCCGATGCGTTTGCGGGGTCGATTCGTTGCGCCAAGATA
TGCGGTCGGTACACGGCAAACTGTCGACGGCTGCCCAATTCGGGGTTGCTTTGTGGCGGC
GGTCGGTTTTCTGGTGGATTTTCTGGATTGTTCGAATAAAGAGCAAACATTTCCCGCACC
GATGAAGGCGTGTATAGGCGTATCGTTTGCAAGCGCCTAAATCTGTTTCTAGCGGCGTTT
CTTAGGCTCACAGCCTGCATGTGAGCTATTCGTATAAAATTAACGCGTTGATAAAATTCG
TACATGCCCTCGGCTCGTGGCGGGTCCTGACTAGAGTTTTCTGGATGAAGCAAATTTGAA
GGTCCCGGGATGGGATCTGTTTCTTGTGATCGGGGAGTGTTCGGTCTGTTCATATTAGGG
CGACGTGGGAAACAACGGAGTGTCGGAATCCTATATGTCGACATCGGGGGACCTGTTCTT
TTCTTATTTAGCGGATGCACGGAAGGATTTGTTCTGTGTAGGGCTTTTAATCGTTTGCTT
TCTATGTAAAGTTCTCTTCTACTCAACGCTGTTGCAGAATTATTTCTATTAGCAGCGGCT
ATCTGCACTGCAAGTCTGTTGCTCCATCTCGATGATCTGTAGTTCTGTGACGGTAGTCTT
GTCTGGTCTTGTTGGTTATTCGGTGTTTCAGACTTAACTACTGAGGATGATGCTTTTGTG
GCGTCTCGAGACTCTTGTTCACGCGTTTGTTCTTTTATTGTTTGTGTGTTGTCTACAACT
TCTGTATTCGAAACAACATTTTCGGCCACTTGGGTATCTTCATGGTCATCTACGTTCACG
GGATTTGCGTCATCTTCGTTTTGTATGTGAACGACATCCATTGGGTCCGTGCGCTGCGAT
GGTGGTGTTGGGCCGTTACCAGTACGTCCGCTATTTCTATTCGTCATCACCATAAACCAC
GAAAGTACCAAAGCTTTCTTGAGAGTTCGAAGCATGATGATGATTAATTGACTCAGACCT
CGCTCTTCCAAGCACATCATCATCATATTGAACATCACAGACAATACTTGCATCGCTCGC
ATACGTAACTCGTGTTTGGTGGCGCTAATTTCTATCGCTCGGGTAAATTCTCGTCTTGAT
CTATTTGAATATCTTTGCGCTAAACGATTTGTTGCGATATTACGCGAACGTCGTCTGCGT
TCATCCTCAGGTTGCCACCTGTAGCCCGGCTGAACTCGTCTTCGGGCCGTGGTCACCCGA
CCTCCCGGATGTTGCGATCTTGTCTGTGTATTTCGCCCCGCCCGAGTTTGTACTTCTTCT
CTCACGTTAGTAGAATTCGAAGGGTCCTGCGCTACACCGCGATTCGGTGAACTCATATCA
ACGTTTGACGAGTGATCCGTTCTTTCACCATTTCTGTCGCTATCCATACTTCGCCTCAAG
TTTCTGTTTGGAGGGCGTGAAATAGGTTCTGCGATATCTGCTAACATCATACATCTCTCC
AAAAGAGATCTAGTGTAATAACCCGGGGAGTCTTGTCTTCCGATATCTCGTTGCAACGCA
AGAATACGACGGCGCAAGTTTTCCCATAAGTTGCGAAGTTCGCGCATAGAAATACGATTT
CCGCGATACCATAAATTCGCCAGATGTACTGTGTGTTTCTGCAACGCGGCCACCCCGTTC
CTTACTTTACGATAGGCCTCTTCCGACGACACCGAGGATCCGCGCGTCCAAAACTCATCT
CTACTCGTTGAAGGTCGACTGAAAGGTGGCGACGGATTGGTTCTGGAGCTTGATGGTTGA
GGATCAACTTCGGATGGACCCGGTTCTGAAGCTGCGGGAGTCGGTTCGGGAACTACACGA
GCCACGTCTTCGTCGTCTCGACCAGGCACGCGGAATCTATCATTGGAACGAGTGGGGTCG
AGTCCTTCGTTATCGCGAGGTGCGCTCTCGTTTCGATCGGTCAAGATATCGAACATTAAA
CGGTCGGTCGGGAGGTTCGTCAACAACGAAGCCGCCGACTGAGCGGCCGCGTCGACGGAA
TCTCTGAAACCAGTGCTGCGAGCGCGAAGAGCATCCGGCTCCAGAGAACGATCACTGTCC
GAGTCGGAACTGGAAGAGAGAAGTTCTCGACGCCAGCCAACACTTAGCAGACGGGGCCGG
GGCCGCGGACGGCGCTCTACGGGCGAGCCTTCGTCAGAGTGAGCGCGACGTCGTCGCTCC
CGTTCGCTGGCAGATACCATCGACAACGACATGTCCGTAATCAAATTTAAAAGCCTCGTT
CCGGAATCGCGCAAGATGTCCCGAATCAGATCCAAGCTCTCGTTGAGGGCCTCCGCGTCC
AGGGGTGGTACGGGACTCATTTGCGTCGAAGAATTAGTCATAGTAGGTCTGCGTGGTGCG
GTAGTATCCTGCGTTTCTTCGTTTGCGGAAGAATTCGTAATATTTCGAGGAGAGGGTGTA
GGAGTGCTCTCGGTGGAAGTCGGCGAGTCACCCCATAGCGAGATCCGCCCGCGTCGTATC
GGCGAGAAATTCCGTCTGTGCGAGATTAATACTCGGCCAGCCGTGGAACTCATTCTCGAC
GAGGTAAAGATGCTGGTGCGCGACGCGTTCGCCGGGTCGTTGTCGCCAGATGTGGACATT
TCACCGAAGTTAACTCGGGCCGATCGCGAGATGCCTCCGGGTGACGAAAAGGGGTTGGGT
AATAATCTTGTAGAGCGCTCGTTCGGGTCGGATGGTCTAAATGTTCTGCCGGTTTCATTT
AACGGTTGGAAAGCTGAAGAACGGGACCCAAATGGAGAACGCTCAGAAACTGAATCTTGA
TTCCTTGATGGATCACTGTCAAACGTTAAAGCATCTAAATTGAGTAAGCGACTACTGTTT
TCTCCATCCCCGCTTTCACCACTGTCTGGACGTCTCGTTCCGCTGGTACTGGCCCCATCC
TCAGCGTTTGTTGTAACTGTAGACGGTCGTGCAGGTCTGCTCCAGCCGGACGTTCCAGGG
GATGTATCGGTTTCCATAGGATCAGTTCCTCGATCAATCGTATTTGGAGTTGATTGAGAA
GAATTGGAAAGCCGATGCCGTACCATGAAAAGCCTTTGATAATTCCTTACTAGACTGTCA
TATCTTTGTACCAGGTTCTGGTATGAATTTACAATCATGTCTTGTGCTGAACCAGCATTG
TCCGTTGGGGGATTGATCCCAAGCGGGTTTTCATTGGCATTGCCTGTGGCGTTCCGTCTA
TTAGAACTGCTATTTTGTGTGTTAGAAGTGCCTGTTGTCGGACTTTGCTGCAGCAATGAA
GTACTAGACATACTCGGACAACCCGATACAGATATTCCAGTTATTAATTTGTAACCAAGA
GCATCGAACGCAACATATCTCACTTTTTCATTTATATTATTAGTGGTAACTTTGGTGAAT
GGTGCTGGATGACTCCAATCCCAAAAGTATAGTTCATTGTAAGTAGCAATTACTAGTAAT
TGTTCACGAGGGTGAAATGCAATAGAAGCTATCACTGTTTCATAGCGAACATTCCACACT
TCACTTCCACCACTTCCCATATCCCAAACTCTTACTTGACCACCAAGACACCCAGAGCCA
ATAAGCTGTGTATGTGACGGGTGAAATGCTATACACCATGGTGTTCTTGGGTGTCCCTCT
AGAATCTTAAGGTGTTTTCCACTAGCCAAATCAGACACATACACATTATGATTGCCATGG
GTTGATGCAACTTTTGTCCCATCAGGACTGAAAACCATCAAAAAAGTTGACCTTGGATAT
CCTGGTAGGTCGCAGCTTCTAATTTTCAGTGGTTTCTGAACTAAAATATCTTCAGCAGCA
TTTTCTAGGACTGTTTTGCTTGCAGGGTAGTGTGGTGGATTCGCTCCGAGCTCTCGCCAT
TGCCAACTACGAGAAACATTGCCGACAACTGGAGTTTCTTCCACGGGATCATGCTTTATG
CTGAGCCATTCATTATCAATCACTGGGTCCATTGTCCATACAATTAAGGACTCGTGTTGT
GCATTGAGATTTTAACCCAAACGCAGACGTGTGTCATTAATTTAGGTTAAAACAAAACGA
ACAGAGAAATTATATTCCTAAAACGCATTTTTGTTAAAACATTTATTGTCACAACACATA
GTTGTTTTATAGCTTATGTAATCCTGTTATTCACTTTCAGTTTTTGAATATTGACGTTAA
GTTTACTGTGTCATATTAAAAAAAAAATAGTTGTCATTAATTAGAGTATAGTACTAACTG
ATTTTAAATTATTTTTATGTTTATTTCGAACAATTTAACAACGTTATTTGTTTTTACGAC
TTAAAACTAACAACAGAATCATCCAATAGCGCCAGCTGCGAACTGTCAAATTGAATTAAA
G
(6361 bp)

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