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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30082_c0_g2_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0021915 P neural tube development
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045335 C phagocytic vesicle
GO:0061734 P parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1903599 P positive regulation of autophagy of mitochondrion
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:4.48 TPM:5.97
ORF EntryO_BomoN4EE12265_complete:A_BomoN4EE_TR30082_c0_g2_i1
Sequence
(Nucleotide)
GTCGTTTGCGTACGTTTGCCGCTAGGGGCGCTGTTCCAACTGCATACAAAAATGGCTCAA
CTTTTACGCTATCGAGTACGTTAACTCGCACTAAGCACACGGATCAATATTTCGATTCGT
TAAGATTAGTATTGTTGCTCCAAACACGGTAGCTATTTTAATGTGCGGAGCGAATTTTTA
TAAAAGTATTTATAAGTAATGTGCAATTACTAAGAGAATAAGAATCTAAGTGCAAATTCT
AGACGTAATAAAAACATTCTTAAACAGTCACAATAACGTTTAAAATTCATTCTGGACTAC
TAGGACATTGATGGCTTGATTTATTTGTTGTAACGCAATTTTTGAGTTACGTTTCATGTA
AAATTACCAAATTACTGCTCTCAGTCATGAAAATTGACATATTTACAAACAATATTCAAA
AATGGGTCTGTTAATTTGAAATTAGTCAATAGACAAAAATCTTGTTTTTTTTTGTACTGT
TATATTTATTACGCGCAGCGACGTTCGTTATTTTCGATTTTTAATTATTCCAATAATTTA
AGGAGATCATTTAGCGTACAAACTAACCATTTCGTATGGCGCTTAATTAAATTACAACAT
AATTAAAATTTCGTACAACCGGCGATGTAATAAAAATTTACGTTTATACCCTCGCAGTGG
CGTAGTGAGCTTAACTCTGCGCCCGGGACACAATACCTTTTTAGCGACCCTATTTAGACT
ATACGTGATTTTTTTTACTTTTTATTTACGAATTAACATTTATTATATTAGACAGGTACT
AAATTTAAAATATATAAAAAAAGAAAAAAAAAGAATTCAATATTTTTTTTGTTTTGAGGA
CCATTTGGCGCCCTTTTGTGAGTAGTACCCGGAACATGAGGCCCCCCTTGCCCCCTTTGG
CCCCCTCTCGCTACGCCACTGTACCCTTGTCGTGTGTGGCAACGTCAACATCCGTGTTCG
GAGTCGACATTTGCAACGTCATTTCGTACAACGCGAGTTGAGAGTTCTAATCACAGTGCT
CATGTAACATCGTGTAAAAATTTATTAAGACAAATGAGCGTGGACCGGTGAAACAGGGTA
CACTTCTAAATTTATATTGATTCTCTTCTGTTCCTACTTGTTAGTTTTCATGTGGATTTA
TTATAAATTAGGCACTCAAAAGCCTCAGGATGTTATCGACTTAGCTCATGACGATAAGCT
GTCCGGCGTTGTTGGCGTAGACCAGACCCTGGCCGGGCTGGGGGGCCCACCGCAAGCAGT
TCAGACTGGTGAACCCCTGCTCCCAGTTCTGCTCCAGTTCCTTGATCGGCGACAGTCCCG
TGCGACTGGAGCTATCGAGCGAGTCGAGCTTGTACAGGAGAGCGAAGACATGGTTGTGGG
CGCGGTGCGTGGACGTGAAGCGTTTGGAGCCCAGTCCCACGGCCAGGTGCCGCGCCGTGG
GGGACAGCGCCACCGACACGGCCGTCTGCTCCAGCACCGCCGTGTGGAGGCACTGACCCA
AGCGACCCCACTCCAGCGAGTACACCCCTAGCCAGTGATTTGTGTTTCTCATGCGGGGAA
CGGGAAGCAGCGCCACCAGCAGTCTGCCGTCTTTTGAAATGTCGATGCTCGCGTCGTTAT
GAATTCTGCATCTTTGGACTACAACATTTTTTTTGCCGTCGGCTAGTTCAGGAACGTTTC
CGGTGGTAAAGTCCCAGGCCTGCACGCGGTGCGAGGAGGCAGGCATGGTCTCCGAGATGA
TGCCGGCGTCGAGCAGCCCCGCCATGCCGCCCAGTCGCCGCGCACCCCCCATACCGCCCG
GCCCACCACCCTCTTCTTCCACCACCATCGCGTTCTGGGCTAAAATTATCGGTTGCAAAT
ATTCGTGGATTCTCGGCAGCCTCTGCGTCGGAGCGTTCTGGCCATCTCGTTGCGCCTGTG
CGTCCTGTGCTTGCGCCGGTGGTGGTGGCGGTGGTGGTGGCGCTGCGTTGTTGGCAACAC
TGTTGAACTGAGGGGGTTCCTCCGATGCGTTTGCGGGGTCGATTCGTTGCGCCAAGATAT
GCGGTCGGTACACGGCAAACTGTCGACGGCTGCCCAATTCGGGGTTGCTTTGTGGCGGCG
GTCGGTTTTCTGGTGGATTTTCTGGATTGTTCGAATAAAGAGCAAACATTTCCCGCACCG
ATGAAGGCGTGTATAGGCGTATCGTTTGCAAGCGCCTAAATCTGTTTCTAGCGGCGTTTC
TTAGGCTCACAGCCTGCATGTGAGCTATTCGTATAAAATTAACGCGTTGATAAAATTCGT
ACATGCCCTCGGCTCGTGGCGGGTCCTGACTAGAGTTTTCTGGATGAAGCAAATTTGAAG
GTCCCGGGATGGGATCTGTTTCTTGTGATCGGGGAGTGTTCGGTCTGTTCATATTAGGGC
GACGTGGGAAACAACGGAGTGTCGGAATCCTATATGTCGACATCGGGGGACCTGTTCTTT
TCTTATTTAGCGGATGCACGGAAGGATTTGTTCTGTGTAGGGCTTTTAATCGTTTGCTTT
CTATGTAAAGTTCTCTTCTACTCAACGCTGTTGCAGAATTATTTCTATTAGCAGCGGCTA
TCTGCACTGCAAGTCTGTTGCTCCATCTCGATGATCTGTAGTTCTGTGACGGTAGTCTTG
TCTGGTCTTGTTGGTTATTCGGTGTTTCAGACTTAACTACTGAGGATGATGCTTTTGTGG
CGTCTCGAGACTCTTGTTCACGCGTTTGTTCTTTTATTGTTTGTGTGTTGTCTACAACTT
CTGTATTCGAAACAACATTTTCGGCCACTTGGGTATCTTCATGGTCATCTACGTTCACGG
GATTTGCGTCATCTTCGTTTTGTATGTGAACGACATCCATTGGGTCCGTGCGCTGCGATG
GTGGTGTTGGGCCGTTACCAGTACGTCCGCTATTTCTATTCGTCATCACCATAAACCACG
AAAGTACCAAAGCTTTCTTGAGAGTTCGAAGCATGATGATGATTAATTGACTCAGACCTC
GCTCTTCCAAGCACATCATCATCATATTGAACATCACAGACAATACTTGCATCGCTCGCA
TACGTAACTCGTGTTTGGTGGCGCTAATTTCTATCGCTCGGGTAAATTCTCGTCTTGATC
TATTTGAATATCTTTGCGCTAAACGATTTGTTGCGATATTACGCGAACGTCGTCTGCGTT
CATCCTCAGGTTGCCACCTGTAGCCCGGCTGAACTCGTCTTCGGGCCGTGGTCACCCGAC
CTCCCGGATGTTGCGATCTTGTCTGTGTATTTCGCCCCGCCCGAGTTTGTACTTCTTCTC
TCACGTTAGTAGAATTCGAAGGGTCCTGCGCTACACCGCGATTCGGTGAACTCATATCAA
CGTTTGACGAGTGATCCGTTCTTTCACCATTTCTGTCGCTATCCATACTTCGCCTCAAGT
TTCTGTTTGGAGGGCGTGAAATAGGTTCTGCGATATCTGCTAACATCATACATCTCTCCA
AAAGAGATCTAGTGTAATAACCCGGGGAGTCTTGTCTTCCGATATCTCGTTGCAACGCAA
GAATACGACGGCGCAAGTTTTCCCATAAGTTGCGAAGTTCGCGCATAGAAATACGATTTC
CGCGATACCATAAATTCGCCAGATGTACTGTGTGTTTCTGCAACGCGGCCACCCCGTTCC
TTACTTTACGATAGGCCTCTTCCGACGACACCGAGGATCCGCGCGTCCAAAACTCATCTC
TACTCGTTGAAGGTCGACTGAAAGGTGGCGACGGATTGGTTCTGGAGCTTGATGGTTGAG
GATCAACTTCGGATGGACCCGGTTCTGAAGCTGCGGGAGTCGGTTCGGGAACTACACGAG
CCACGTCTTCGTCGTCTCGACCAGGCACGCGGAATCTATCATTGGAACGAGTGGGGTCGA
GTCCTTCGTTATCGCGAGGTGCGCTCTCGTTTCGATCGGTCAAGATATCGAACATTAAAC
GGTCGGTCGGGAGGTTCGTCAACAACGAAGCCGCCGACTGAGCGGCCGCGTCGACGGAAT
CTCTGAAACCAGTGCTGCGAGCGCGAAGAGCATCCGGCTCCAGAGAACGATCACTGTCCG
AGTCGGAACTGGAAGAGAGAAGTTCTCGACGCCAGCCAACACTTAGCAGACGGGGCCGGG
GCCGCGGACGGCGCTCTACGGGCGAGCCTTCGTCAGAGTGAGCGCGACGTCGTCGCTCCC
GTTCGCTGGCAGATACCATCGACAACGACATGTCCGTAATCAAATTTAAAAGCCTCGTTC
CGGAATCGCGCAAGATGTCCCGAATCAGATCCAAGCTCTCGTTGAGGGCCTCCGCGTCCA
GGGGTGGTACGGGACTCATTTGCGTCGAAGAATTAGTCATAGTAGGTCTGCGTGGTGCGG
TAGTATCCTGCGTTTCTTCGTTTGCGGAAGAATTCGTAATATTTCGAGGAGAGGGTGTAG
GAGTGCTCTCGGTGGAAGTCGGCGAGTCACCCCATAGCGAGATCCGCCCGCGTCGTATCG
GCGAGAAATTCCGTCTGTGCGAGATTAATACTCGGCCAGCCGTGGAACTCATTCTCGACG
AGGTAAAGATGCTGGTGCGCGACGCGTTCGCCGGGTCGTTGTCGCCAGATGTGGACATTT
CACCGAAGTTAACTCGGGCCGATCGCGAGATGCCTCCGGGTGACGAAAAGGGGTTGGGTA
ATAATCTTGTAGAGCGCTCGTTCGGGTCGGATGGTCTAAATGTTCTGCCGGTTTCATTTA
ACGGTTGGAAAGCTGAAGAACGGGACCCAAATGGAGAACGCTCAGAAACTGAATCTTGAT
TCCTTGATGGATCACTGTCAAACGTTAAAGCATCTAAATTGAGTAAGCGACTACTGTTTT
CTCCATCCCCGCTTTCACCACTGTCTGGACGTCTCGTTCCGCTGGTACTGGCCCCATCCT
CAGCGTTTGTTGTAACTGTAGACGGTCGTGCAGGTCTGCTCCAGCCGGACGTTCCAGGGG
ATGTATCGGTTTCCATAGGATCAGTTCCTCGATCAATCGTATTTGGAGTTGATTGAGAAG
AATTGGAAAGCCGATGCCGTACCATGAAAAGCCTTTGATAATTCCTTACTAGACTGTCAT
ATCTTTGTACCAGGTTCTGGTATGAATTTACAATCATGTCTTGTGCTGAACCAGCATTGT
CCGTTGGGGGATTGATCCCAAGCGGGTTTTCATTGGCATTGCCTGTGGCGTTCCGTCTAT
TAGAACTGCTATTTTGTGTGTTAGAAGTGCCTGTTGTCGGACTTTGCTGCAGCAATGAAG
TACTAGACATACTCGGACAACCCGATACAGATATTCCAGTTATTAATTTGTAACCAAGAG
CATCGAACGCAACATATCTCACTTTTTCATTTATATTATTAGTGGTAACTTTGGTGAATG
GTGCTGGATGACTCCAATCCCAAAAGTATAGTTCATTGTAAGTAGCAATTACTAGTAATT
GTTCACGAGGGTGAAATGCAATAGAAGCTATCACTGTTTCATAGCGAACATTCCACACTT
CACTTCCACCACTTCCCATATCCCAAACTCTTACTTGACCACCAAGACACCCAGAGCCAA
TAAGCTGTGTATGTGACGGGTGAAATGCTATACACCATGGTGTTCTTGGGTGTCCCTCTA
GAATCTTAAGGTGTTTTCCACTAGCCAAATCAGACACATACACATTATGATTGCCATGGG
TTGATGCAACTTTTGTCCCATCAGGACTGAAAACCATCAAAAAAGTTGACCTTGGATATC
CTGGTAGGTCGCAGCTTCTAATTTTCAGTGGTTTCTGAACTAAAATATCTTCAGCAGCAT
TTTCTAGGACTGTTTTGCTTGCAGGGTAGTGTGGTGGATTCGCTCCGAGCTCTCGCCATT
GCCAACTACGAGAAACATTGCCGACAACTGGAGTTTCTTCCACGGGATCATGCTTTATGC
TGAGCCATTCATTATCAATCACTGGGTCCATTGTCCATACAATTAAGGACTCGTGTTGTG
CATTGAGATTTTAACCCAAACGCAGACGTGTGTCATTAATTTAGGTTAAAACAAAACGAA
CAGAGAAATTATATTCCTAAAACGCATTTTTGTTAAAACATTTATTGTCACAACACATAG
TTGTTTTATAGCTTATGTAATCCTGTTATTCACTTTCAGTTTTTGAATATTGACGTTAAG
TTTACTGAAAAAGAATTACATAGGATTTTATCTTCACTGCTATATGACTACCTACTTGTT
ATGACCGGGACGACTGCGTGCCATATTGGAATGTCATTTTTTTTTTGTATAATTGTTCAC
TTTAGTAGTTAGACTTGAAAATTAAGTTTTTTGGCTATATTTCATCATTGAATCCAACCT
AATCAACGGTAGTACGGTACTTACAAAACTAAAGATCCACATAAATTGTTTTTTTGTCGT
GTTTAACAATATGTCAAATACACTTTACCTGTGTCATATTAAAAAAAAAATAGTTGTCAT
TAATTAGAGTATAGTACTAACTGATTTTAAATTATTTTTATGTTTATTTCGAACAATTTA
ACAACGTTATTTGTTTTTACGACTTAAAACTAACAACAGAATCATCCAATAGCGCCAGCT
GCGAACTGTCAAATTGAATTAAAG
(6624 bp)

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