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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30068_c0_g3_i9
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_pseudouridine-metabolizing_bifunctional_protein_C1861.05_isoform_X2_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0004730 F pseudouridylate synthase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0046113 P nucleobase catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.49 TPM:0.65
ORF EntryO_BomoN4EE12157_complete:A_BomoN4EE_TR30068_c0_g3_i9
Sequence
(Nucleotide)
CTTTTGTTATCTATGGACCAGCTGCGAGTTGTGACCTTGAATGCGAATCGAAGTAACCAA
ACAACCATACGGCAGCAATAATATTCCGTTTTTAAATTATAGTACAGAAAATACAGTGTC
AATAATACAGTTTCTAAAATTCAAGATGGCGTACCGACTAAATGGCATACCGAAACTTGT
TCAGCGTAATTTGGGTTTTCTTAGAAATTATAGCGAGTCTCGTCATCCCTTCGTTTATTC
CAAGGAAGTTTCTCGGGCGAAGTCAGAAAATATGCCAATAGTAGCCCTCGAATCAACTAT
TATTACACACGGAATGCCTTACCCACAGAACTTGGAAACGGCTCTGGAAGTGGAGAATAT
AATTAGGCAACGGGGTGCCGTTCCAGCGACTGTGGCAATTCTTAAAGGGCAATTGACCGT
TGGTCTGACGGAAGATCAACTTCGATACCTTGCTCAGGCCAAAGGTGTAATTAAAGCATC
GAGACGTGATCTTGCTTATATAGCTGCGGCTAAGCTTGACGGTGCCACAACCGTCGCTGG
GACAATTATTGCTTCAGAATTAGCTGACATACCAGTCTTCGTGACCGGTGGAATTGGGGG
CGTCCATCGTGAAGGTGAAAGTACACTAGACATCTCAGCAGATCTGAATGAACTCGGGCG
AAGCAAAACACTCGTTGTTTGCAGCGGAATCAAATCAATACTCGACATTGGAAGAACTCT
CGAATATTTGGAAACGCAAGGCGTCTGTGTGTGTTCGTTTGGCGAGTCTAACGAGTTTCC
AGCATTTTACACGGTCCGTTCCGGTCACCGGGCTCCGTATAGCGTTGCCGACGCGAAGCA
CGCCGCTCGGATTCTTCACGAATCACACAGATTCCACCTCAATTCCGGCGTCGTCATCGC
TGTTCCTGTGCCGCGACGTGACGCTATGGACGAAAAAGTAATTGAAGAGGCTATCAATAG
TGCCCTGACGGATGCCAAAAGAAAAGGTATTCGCGGTAAAGAAGTTACTCCTTACATTTT
ATCGAACGTCAGTGAAGCGACCAGCGGCACGTCACTTGAAACCAATATCGCATTGATAAA
GAACAATGCGCGCGTCGGCGCCGATATAGCCGTCGAATTTAAAAAACTCAAGAACGCCGA
CAATGTAAACGATTCTAATATTGGATTCCGCAAGGGCGCCGAGAATATCTCGAATTTCAC
GAGGACATTTCACACTTCGTCTAATACGAGGAGCGGGGCGGAGAATTGCGGAGATGATAC
GCCTATGCTCGCTTTAGATATGAAGGCGGACGGAGACGTGCTCGTGATCGGAGGGGCCAA
CGTTGACAGAACCTACAGAGTATCAGAAGATACCATTCAGCACAATTATGTTCGCGTGTC
CGAGCGAGACAGCGAGATATTGCTTCTTCACACCAACTCGCACTGTTGAACCATTCGGCT
ATTTTTAAAAAAAATGTCATTTTTTAATACTAATATATATGTACATATTTAAATGATGTA
CAAAATGAAACCAAAGAAATAATACTTTTGTCTTGTAAATCAATGTTAAACATGGAAAAA
CAGTAGATTTAATAGTTTAAAGGTTTCCTAGTATGATGACGTCATGTCTTTTCAGAAAAA
TAAAGCACGATATTTTAACAAACATTTTATTTAATGCATTTATAATGATAGTATTAGCTC
TCAGTCGCCTAGTGCGTACCTTCGGAAAGTTTGAACAACTATAGTTATTGAAAATTAAAC
ATATTTAATCAGAAACCATCAAGTTGCAAGATAAGAATCTTAAGCGACACATTACACTGA
CGTAATCTTCCTCTATTAACAATCTATTTTACTTGCATAGAAGATAAGTTAGTAGTCATC
CAATAGTTACCAAGAAAGTATAATAATATAATTAAAATTCAGTAAAAAGGTAGTTGATAG
AACATTATATAGACGGAGGCAGCACGTTACTGTAAATTTCAATCATTATTATTCTTTATT
TTATCTCATTTCGATTAGTAACATTAAATAAAGACAACATCAGTAATATAATTATGTAAG
CCAAGGCACATGTAGTTTAACCTTTTATTTGGAAGAAATGCAGGACTTAGATTGGATCCT
ATCTACAAATTATTCAACTTTCCGAATATAGGTACAAATTTTATAAGATTGGTACATTTA
TGTGACAACAATATTTAAAAAACTATTTTTCTGCATAAATTCACAAAATATTAGACCTAC
TCTAAGCGAACATAATACAATAATCGTAATTACAATATAATATCTATAAAGTTACACCAA
TATAAATACAAATATGTACGACAGAAGATATTCGAATATCATTTTGATAAGGGCTTTCGG
GCACAATGGCCGGCTCCAACCCGCCACAGAACACGCGCGCAATCACGAGGTTCTACGGAA
CGATCTCAGCACGAGGCACGTATAGGTCACACCTACACTTGACACAGCCATGATATAATA
TAATCTAACCTATGGATACGACGCCACACATACGATTCTCGGGATAATTTAGAACCTGTG
CATGCTTACGAGTGAGTCCCCCTTACATTTTTTACGTAATGATTGAAATTAATACGTTTG
AAATTCTTCTGCGACAGTCGAACTAGAATGGTGCTCGTTCGATTTATATTGTTCACAAGC
ATATTATATTTGTAGGCACTACGTTGTTTAAGCTCATATCAGTACTATTTGTGTAAATCT
GTCCATGTACAACAACTCGCGCTCTACTCATGTACAAATTGTTATTATTATTTACACATT
ACACTCACCTTTACTAGAAGGTTTTCCAGTTATATAACGAGAACTAGATAAATAGACAAC
GATCGACACCACTCGCACACTCGCTCACGTGTTTAAAAGCTTACGGGACATTGGTTCTTG
AATAACGCATGTTTCCTAACCAAGCAAGTGAATCACTAATCTACGTTCCGAAGTGTTCGG
ACTAAAAATACTGTTTGGAGATCGGTGCAGGATTAAAAATCTGACTAAAAATGTATGTTA
AATGTATAACACGCTGACTTCGGAAATTATCGAAAACGTTTTTTAGGATCATGACAATAT
ATTATTATAACATACGATGCCTGTAATAAAACGCCGCTTTCTTGTACCTATAGTAGAATT
ATTTTGTCCGTGCATTTTGAGTCATAAAAAATCGGAGCGGTGAAGCGAGTATTTCG
(3176 bp)

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