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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30068_c0_g3_i8
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_pseudouridine-metabolizing_bifunctional_protein_C1861.05_isoform_X1_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0004730 F pseudouridylate synthase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0046113 P nucleobase catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.29 TPM:0.38
ORF EntryO_BomoN4EE12156_complete:A_BomoN4EE_TR30068_c0_g3_i8
Sequence
(Nucleotide)
CTTTTGTTATCTATGGACCAGCTGCGAGTTGTGACCTTGAATGCGAATCGAAGTAACCAA
ACAACCATACGGCAGCAATAATATTCCGTTTTTAAATTATAGTACAGAAAATACAGTGTC
AATAATACAGTTTCTAAGTAAGTTTGGCTGTGGCCTTTTGCAAACTAATTTATTTAAGCA
TCGAAGCGAATTCAAGATGGCGTACCGACTAAATGGCATACCGAAACTTGTTCAGCGTAA
TTTGGGTTTTCTTAGAAATTATAGCGAGTCTCGTCATCCCTTCGTTTATTCCAAGGAAGT
TTCTCGGGCGAAGTCAGAAAATATGCCAATAGTAGCCCTCGAATCAACTATTATTACACA
CGGAATGCCTTACCCACAGAACTTGGAAACGGCTCTGGAAGTGGAGAATATAATTAGGCA
ACGGGGTGCCGTTCCAGCGACTGTGGCAATTCTTAAAGGGCAATTGACCGTTGGTCTGAC
GGAAGATCAACTTCGATACCTTGCTCAGGCCAAAGGTGTAATTAAAGCATCGAGACGTGA
TCTTGCTTATATAGCTGCGGCTAAGCTTGACGGTGCCACAACCGTCGCTGGGACAATTAT
TGCTTCAGAATTAGCTGACATACCAGTCTTCGTGACCGGTGGAATTGGGGGCGTCCATCG
TGAAGGTGAAAGTACACTAGACATCTCAGCAGATCTGAATGAACTCGGGCGAAGCAAAAC
ACTCGTTGTTTGCAGCGGAATCAAATCAATACTCGACATTGGAAGAACTCTCGAATATTT
GGAAACGCAAGGCGTCTGTGTGTGTTCGTTTGGCGAGTCTAACGAGTTTCCAGCATTTTA
CACGGTCCGTTCCGGTCACCGGGCTCCGTATAGCGTTGCCGACGCGAAGCACGCCGCTCG
GATTCTTCACGAATCACACAGATTCCACCTCAATTCCGGCGTCGTCATCGCTGTTCCTGT
GCCGCGACGTGACGCTATGGACGAAAAAGTAATTGAAGAGGCTATCAATAGTGCCCTGAC
GGATGCCAAAAGAAAAGGTATTCGCGGTAAAGAAGTTACTCCTTACATTTTATCGAACGT
CAGTGAAGCGACCAGCGGCACGTCACTTGAAACCAATATCGCATTGATAAAGAACAATGC
GCGCGTCGGCGCCGATATAGCCGTCGAATTTAAAAAACTCAAGAACGCCGACAATGTAAA
CGATTCTAATATTGGATTCCGCAAGGGCGCCGAGAATATCTCGAATTTCACGAGGACATT
TCACACTTCGTCTAATACGAGGAGCGGGGCGGAGAATTGCGGAGATGATACGCCTATGCT
CGCTTTAGATATGAAGGCGGACGGAGACGTGCTCGTGATCGGAGGGGCCAACGTTGACAG
AACCTACAGAGTATCAGAAGATACCATTCAGCACAATTATGTTCGCGTGTCCGAGCGAGA
CAGCGAGATATTGCTTCTTCACACCAACTCGCACTGTTGAACCATTCGGCTATTTTTAAA
AAAAATGTCATTTTTTAATACTAATATATATGTACATATTTAAATGATGTACAAAATGAA
ACCAAAGAAATAATACTTTTGTCTTGTAAATCAATGTTAAACATGGAAAAACAGTAGATT
TAATAGTTTAAAGGTTTCCTAGTATGATGACGTCATGTCTTTTCAGAAAAATAAAGCACG
ATATTTTAACAAACATTTTATTTAATGCATTTATAATGATAGTATTAGCTCTCAGTCGCC
TAGTGCGTACCTTCGGAAAGTTTGAACAACTATAGTTATTGAAAATTAAACATATTTAAT
CAGAAACCATCAAGTTGCAAGATAAGAATCTTAAGCGACACATTACACTGACGTAATCTT
CCTCTATTAACAATCTATTTTACTTGCATAGAAGATAAGTTAGTAGTCATCCAATAGTTA
CCAAGAAAGTATAATAATATAATTAAAATTCAGTAAAAAGGTAGTTGATAGAACATTATA
TAGACGGAGGCAGCACGTTACTGTAAATTTCAATCATTATTATTCTTTATTTTATCTCAT
TTCGATTAGTAACATTAAATAAAGACAACATCAGTAATATAATTATGTAAGCCAAGGCAC
ATGTAGTTTAACCTTTTATTTGGAAGAAATGCAGGACTTAGATTGGATCCTATCTACAAA
TTATTCAACTTTCCGAATATAGGTACAAATTTTATAAGATTGGTACATTTATGTGACAAC
AATATTTAAAAAACTATTTTTCTGCATAAATTCACAAAATATTAGACCTACTCTAAGCGA
ACATAATACAATAATCGTAATTACAATATAATATCTATAAAGTTACACCAATATAAATAC
AAATATGTACGACAGAAGATATTCGAATATCATTTTGATAAGGGCTTTCGGGCACAATGG
CCGGCTCCAACCCGCCACAGAACACGCGCGCAATCACGAGGTTCTACGGAACGATCTCAG
CACGAGGCACGTATAGGTCACACCTACACTTGACACAGCCATGATATAATATAATCTAAC
CTATGGATACGACGCCACACATACGATTCTCGGGATAATTTAGAACCTGTGCATGCTTAC
GAGTGAGTCCCCCTTACATTTTTTACGTAATGATTGAAATTAATACGTTTGAAATTCTTC
TGCGACAGTCGAACTAGAATGGTGCTCGTTCGATTTATATTGTTCACAAGCATATTATAT
TTGTAGGCACTACGTTGTTTAAGCTCATATCAGTACTATTTGTGTAAATCTGTCCATGTA
CAACAACTCGCGCTCTACTCATGTACAAATTGTTATTATTATTTACACATTACACTCACC
TTTACTAGAAGGTTTTCCAGTTATATAACGAGAACTAGATAAATAGACAACGATCGACAC
CACTCGCACACTCGCTCACGTGTTTAAAAGCTTACGGGACATTGGTTCTTGAATAACGCA
TGTTTCCTAACCAAGCAAGTGAATCACTAATCTACGTTCCGAAGTGTTCGGACTAAAAAT
ACTGTTTGGAGATCGGTGCAGGATTAAAAATCTGACTAAAAATGTATGTTAAATGTATAA
CACGCTGACTTCGGAAATTATCGAAAACGTTTTTTAGGATCATGACAATATATTATTATA
ACATACGATGCCTGTAATAAAACGCCGCTTTCTTGTACCTATAGTAGAATTATTTTGTCC
GTGCATTTTGAGTCATAAAAAATCGGAGCGGTGAAGCGAGTATTTCG
(3227 bp)

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