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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30068_c0_g3_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_pseudouridine-metabolizing_bifunctional_protein_C1861.05_isoform_X2_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0004730 F pseudouridylate synthase activity
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0046113 P nucleobase catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.25 TPM:3.00
ORF EntryO_BomoN4EE12149_complete:A_BomoN4EE_TR30068_c0_g3_i1
Sequence
(Nucleotide)
CTTTTGTTATCTATGGACCAGCTGCGAGTTGTGACCTTGAATGCGAATCGAAGTAACCAA
ACAACCATACGGCAGCAATAATATTCCGTTTTTAAATTATAGTACAGAAAATACAGTGTC
AATAATACAGTTTCTAAAATTCAAGATGGCGTACCGACTAAATGGCATACCGAAACTTGT
TCAGCGTAATTTGGGTTTTCTTAGAAATTATAGCGAGTCTCGTCATCCCTTCGTTTATTC
CAAGGAAGTTTCTCGGGCGAAGTCAGAAAATATGCCAATAGTAGCCCTCGAATCAACTAT
TATTACACACGGAATGCCTTACCCACAGAACTTGGAAACGGCTCTGGAAGTGGAGAATAT
AATTAGGCAACGGGGTGCCGTTCCAGCGACTGTGGCAATTCTTAAAGGGCAATTGACCGT
TGGTCTGACGGAAGATCAACTTCGATACCTTGCTCAGGCCAAAGGTGTAATTAAAGCATC
GAGACGTGATCTTGCTTATATAGCTGCGGCTAAGCTTGACGGTGCCACAACCGTCGCTGG
GACAATTATTGCTTCAGAATTAGCTGACATACCAGTCTTCGTGACCGGTGGAATTGGGGG
CGTCCATCGTGAAGGTGAAAGTACACTAGACATCTCAGCAGATCTGAATGAACTCGGGCG
AAGCAAAACACTCGTTGTTTGCAGCGGAATCAAATCAATACTCGACATTGGAAGAACTCT
CGAATATTTGGAAACGCAAGGCGTCTGTGTGTGTTCGTTTGGCGAGTCTAACGAGTTTCC
AGCATTTTACACGGTCCGTTCCGGTCACCGGGCTCCGTATAGCGTTGCCGACGCGAAGCA
CGCCGCTCGGATTCTTCACGAATCACACAGATTCCACCTCAATTCCGGCGTCGTCATCGC
TGTTCCTGTGCCGCGACGTGACGCTATGGACGAAAAAGTAATTGAAGAGGCTATCAATAG
TGCCCTGACGGATGCCAAAAGAAAAGGTATTCGCGGTAAAGAAGTTACTCCTTACATTTT
ATCGAACGTCAGTGAAGCGACCAGCGGCACGTCACTTGAAACCAATATCGCATTGATAAA
GAACAATGCGCGCGTCGGCGCCGATATAGCCGTCGAATTTAAAAAACTCAAGAACGCCGA
CAATGTAAACGATTCTAATATTGGATTCCGCAAGGGCGCCGAGAATATCTCGAATTTCAC
GAGGACATTTCACACTTCGTCTAATACGAGGAGCGGGGCGGAGAATTGCGGAGATGATAC
GCCTATGCTCGCTTTAGATATGAAGGCGGACGGAGACGTGCTCGTGATCGGAGGGGCCAA
CGTTGACAGAACCTACAGAGTATCAGAAGATACCATTCAGTTGGACGGCAGTACACATGC
TTGCGTCATGGATCAATGCGGCGGTGGAGTCGGACGTAACATGGCAGAAGCACTATGGAG
ACTGCGGGGCGGACGTACGAAACTTCTGACCGCCATAGGCGACGATGCCGATGGAAAATA
CTTAGAAGAGATTGCACCAGGCCTGATACTGAACGGATGCGTCGTAAAGAACGGTCGGAC
GCCAACATATGCGGCAGTGATGGATTCCCGGGGAGAATGCCTTCTAGGTCTCGGCGACAT
GGCATTACACAATGACATCACCGTCGACAGGGTAAACAATAATATGACGCTATTAGAAAG
GGCTCCACTTGTAGTTCTCGATGGCAACGTCCCACAAATTACTATGGACCATGTCTTAGA
GCAATGTCAACGGCTTCGAAAACCTGTGTTCTTCGAGCCGACCGACCGAAGGAAAGCAAC
AAAAATCCTTCAAAACAATGAGAACACGGTGGCTTTCTCCAGTCCGAATGTTGCGGAATT
AAGAGCTATGGCTACCTTTCTAGAGCCAAATTTACGAGGCTCTTTAACTTCAGATTTAGA
AGAAATTAAATTACTTTCAAAAATTGTAGCCAAAAGGGTACAATATTTGATAGTTACTGC
TGGATCTAAAGGTGTATTTATTGTAAATAAAAATATAACAACAAAGGAACCATTAATAAG
CCATTTTCCAGTTGATTACATACAAAATGTTGAGAATGTTTCTGGTGCTGGTGATTGTTT
TTCTAGTGGTTTTGTACTAGGTGTTCTACTAGGATTAAGGAAATCTTTGTGTGTCCGCAT
TGCTTTTGAAACGGCAAAAGCCGCCTTACTCTGTAAAAAAACAGTCCCACAAAATTTAAA
TGTACGACTAGTCTACCCAAAATCCATTAAATAAAGATGACTACTAATAATTGCAACAAA
AGAATTACGAATCTTGTTCTCAATTCTTTAAAATTACAAAATGACTTTATTGATATGATG
ATCTAAACTATCTAATATACAACATGTATACATGTAAATGTCAATGAATCTCAATAATAT
AAGAATAATTTAGTTTATCTTTATTTTGTAAATTCGCTGAATATTTTATTAAACAACAAT
CTTATACTTAATATTATAAAGCTGAAGAGTTCGTTTGTTTGTTTGAACGCGCTAATCTTG
GGAACTACTGGTTCGTTTTGAAA
(2543 bp)

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