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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30066_c0_g2_i5
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_DNA_topoisomerase_3-alpha_[Bombyx_mori]
Ontology
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006265 P DNA topological change
GO:0007126 P meiotic cell cycle
GO:0008270 F zinc ion binding
GO:0016605 C PML body
GO:0016853 F isomerase activity
GO:0046872 F metal ion binding
GO:1901796 P regulation of signal transduction by p53 class mediator
Transcript
Level		FPKM:0.31 TPM:0.41
ORF EntryO_BomoN4EE12116_complete:A_BomoN4EE_TR30066_c0_g2_i5
Sequence
(Nucleotide)
CGCTTTTATTACAAACGTTGGTACGAAATAACAATATCTATATTAGATGTAACACTTATG
TTTCATATTTACAATATATTACACAGTTCACTTCATTACTTTATATACCAACAAGTTTAA
TTACCAAAACAAGAATCATCTGCTATCGATATTAAACATTTCTCTGATGAATACAATTCG
AAAATTGATATAAATTAGCGAAATAAATTATTATAACAAGTAAAGTTGGTTGCAGATTCT
TTTTTTCTATCGTTACATATTCATGCCTTTTACGATTTAATTAAAAAATCATATGCAATG
AAATGCTTTTGAAAAATTAACCGGTAAAAGCTTCATCAGCTTTTGTTTGTTTAGACACAA
CATAACCAGTTGCCTATATTAAGCATATAAATAATAAATTAATAAATTATCGAGCAAATC
ACACACGGTCATCTGGTCCCAAACTATACCTGTACCATGGGAACCACAAATATATGCCTT
TAAATGTATACACTATACTTTAAAAATATTCAACACCCAGTCACAGATCAAACTTGTCCG
CACGCAATTGTTTTGGCTGAAGTAAGAATCGAACCTATCGGCCTAGCTGTCAAAGGGCTT
TAACCACTACGATACCGGGATCGTTATATTTATCATTTTAATTTCGTTTTGGTCATTAAA
AAGTAGTTTATTTGTTGGTTATATATACATTATTGTTAGTCTGTGGAGGGTCTCCTTATA
GAGCAGGTTCGAAAGTCGTGTTCGGTGCTCCCACAGAAGCTGCAATGCCGCACCGCGCCC
CGGCGGGACGCTCGGCCTCCGCCGCGGGAGCTCACAGGGGCAGGCCGAGCAGGACCTGGT
CTGGAGCCGCTTTCATCGGCCCATTTAAAGAAGTTGCATTTCGAGCTCAAGTCTTTCGCG
CACCCATAGAACTGTCGTCCTTTATTTGGGCCCTCTTTGTGTACCGTTAGTTTTTTACAA
GGCAAACGACAGTCACACTTGACGTCATCAGTGTTGCCAGACCCAGTATTTCTATTACGA
TTTGCATCCCGTCTGGCAACACCAGTTGTATTAAAAGTCGTTTGCTCAGACGACGACGGC
GGAGTCTCGAATGCAGACTGAGCATTATTGACGGATTCTGGAGCCCACAAGAAGAAATCA
CATCCACCGTTCTCTTTCCCGACTGGACATTTGTAAAATTTTTGGCCAAAATTCTGATTT
TGTTTCTTAGACGTTAATAAGATCGCCGGTTTTGAGCATCTGCAGACCACGTGATTGTCA
TCTAAGTTAGCGGCATTACTGGCGCTGTTCATCCTAATGTTTGTCGTGTTCATAGCATTG
TTCCTCTGCGCCGGTATATCTCTACCTCTATTTGAACCAATTTCTATGGGATTTCGAAGT
GCATTACTCGGTATAATATGGTTTTGTATGGGTACTGATATATCTGTTCTCGAACTGGTG
TTCGAAGAGGTGACTTGTGCGGAGGAGCCCGATGTTTTTATGACACTGTTGATGTTTATA
TTGAGATATTCTAGAAACGTTCTATCGCCCCCGCCGATGCAGCCCGTGTACGGCGGTGCG
TATATGTGACTTATGGAATTGTTTCGCCATTCAAACTTCATCATCTTGTAGTCCGGTCCA
CACTCTGTGCAAGTGTCTGGTAAAACTTGCAATGACTTAACTATATTAGGTAGCCAAACT
ACATTTTTGCAGTTAGGAAATGACATGCAACCGATATAATATTCGGTCGGATTATTCTTT
TTCTGTCTTACGATCATGTCCGAGCCACATTTCGGACATTTTAAGGCCGCGGGCATGTCG
ACCGGTAAGGTATCCCCGCTCGCAGGCGGCGCCGCCGGCTGCTCGTTCAGTCTCTCCGCG
AGCGCTCTGTCTATCTTCTCAGCCTCCGCCGATGCTTTAATGTACACCTCTTTATATTTT
GCTATCTAGATTATTAATATAACGATTTATTATTATTTACTGGTTGTAATGTGAGTGGTT
TAGATGAAGAATAAAAATAAAAGTTATTTGAAGTGACAACTGTTTTTTTTTGATTTGACC
CTTTAATCAAACAAATTCAAAGACTTGGATTTCTCGGTCAAATTGTTTCCTCTGTCGAGG
TGTGATGCCTCTATTTATAAAATATATCCTTCCATGAATGTGCGTTTTAAGACACAAATA
CGTATTTTTATCGTTTAAGTCAGTACCTCCTAGACCTGATCTTGGTTTGGACAGCCCTAA
GATATCAATATATTTTTAATACACTTTTCTGCACTTAAATTAAGAAAAGAACCTACCGCG
TACACGATACGATAAGATATATATAAATCTGACACACTTAAGGTATTGATACGTACAAGT
AACGTATTTGGTGATAAAAACTATTAAAATTATTGTCGCTCATTTACAAATATGGATTAA
AAAAAAAACAAAATTATCGACAAACCTGTTCAGATAAAACCGCTTCAGGCTGTTTCCTTC
CTTCGATAATTTCTTTGAGATCAGACTCTAACTGAGCACGGAGATGAGGCTTCGACATTT
CGAGGCCCATAGCATCGTAGCCCTCCACCAGTCCCATGCCTAAGACACCGGGAACGAAAT
ATTTTTCATCTGCCAACGCTACATACGAACGGCTTTTTATCTTCTCAATGTGCTCAGCGT
GCGTTGCGTCTGTCCCGATGCCATGTTTTTCCATGAGACTAATGAGGTCGGCTTCTGTTA
GTAAGCTAGGAGGTGAAGTAGTACCGGATACGATGTCTATTGAGGTTGGACTGAATATTT
GACCTTCCTGATAGACGTGTATTTCTTTAGACGACCACTTCTCGTAGATGTATACCTCTA
GGTAGTTTAATTCGGTGATCACGAGTCCGTTGGCGGAAAACTTCTCTCTGCCTATATCTA
TGTTAACGATCGTCTCCTGACCCTGAGCGTCCTTGGAACAGCACGCAAGGAACGATCGCA
CTATGAACTCGTAAAGGCGTTTCTCGTTGCCCGATAAATTGTTCGTATATTTTGTTGGAT
GTATAGGCGGATGCGCTTTGTCGCTTTTCTTTCCTTGCCTCGGAGTTGGCCCGCCGTTAT
CTAATATCTTCTGCGCGAATGTACCCCAGTTCGGATCACCGGTCTGCTGACCAACTAACT
GGGCTAAGTTCATCTCCTTCGGAAACTCATTTGTCTCTGTACGAGGGTAGCTGATGAAGC
CTTGGGTGTAGAGTTTCTCGGCGAGTTGCATTGTCTCTTTCGCGTGTATTTTTAATTTAC
GTGACGCTTGCTTTTCTAGTTCCACAGTTTCCAAAGGCAACGGCCGCCATTTAGACTTAG
GTTTAGTTTTCACTTCAAGCACTCTCGCCAAAGGATTCTCAGTGCAAATATCATGAAATA
TTTTACAAGCATATTCGTCAAACAACCGAAAACGTTCCCATGCGAACTCTACACTGAGGT
TCTCTATAGTATGATTTACCTTTAATTTCCAAAACGTTTCGACAATGAAGTTTTCTATGG
CTCTATAGCGTTCCACCACAAATCCAAGAGTGGGAAATTGACAAGAACCATAACTCACTA
TGGTGTCTGTTAGTTTACTTGGGAATACCTTTTGGAGTCTCAATGTTTGGAACCTTGTGA
ATGCCGCACCTATCCTTAAATCAAGTTCTTGTCTGACATCTACTGCATTACTAGTATTCT
TGTTTGGTTCTTCTAAGTTTTGTAAAGCTCTATTTACTGAAACTAATGTGATCTCTGAAA
ATTTTGCTCTATATATTTTCAAATTTGTCCTGGCAGCTTTACAAACATCAATAATCTCAA
AACCTATGTTCTCTCCTTCTCTGTCACAATCCGTCCATATTATGAGGCCTTGACAGCTTC
GAACTTCTCGCTCTAAGGTCATCTTAATTTTTTGGTAATTCTCTGGGCAGTATTTGAAAA
CAGGTGCATCAAACAGTGATAGTGGGCTACAGGTTTGCCAGGTTCTGTATGTTCCACTAA
ATTCTAGGGCTAAGAGATGTCCTGATACTGAGGTCATCACCATTTCACAATCTTGCCCCA
TTACGTTGGCTTTAAATTGATATATTTTGTTGTACTTTGATAGTCCTTTACGCCCAGTTG
ATGTTCCTTTGGATAGATGTGATGCAATATTTTTAGCTGCATCATTTTTCTCTGCTACAT
TTAAATATTTCATAGTAGAATATTTGTTTACAAATATCTGTTTGTTTACTAAAAAACAAA
GTGTTCTATTCAATCTGCTATTTAGCTTTTCAAGGCATTGTAACATATTTTTTATAAACG
TTATATTATTTTCATAACAGAGAGATAGAATCTTGATATTGAACCTATAAATGTGTATGC
CTGCAGCAGAGAAAATTACTCTGAATATTCTGGGAATGTTACAGTAAAATTTATATCCCC
GTAATATTAAATTTAAACTACATATCTGTTTAACCTATGTTTAAATTAGTGTTTAATTAT
AATCACTTAAATTAATAAACAAACATATTTGAAATAAACATCCCACAATTTATCAAATAT
TATGCGTCAATTGTCAAGTGTACCGTACCTCCATACGTA
(4539 bp)

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