SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30064_c0_g1_i6
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		cycle-like_factor_BmCyc_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003053 P circadian regulation of heart rate
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0032922 P circadian regulation of gene expression
GO:0042594 P response to starvation
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048148 P behavioral response to cocaine
GO:0048511 P rhythmic process
Transcript
Level		FPKM:0.49 TPM:0.65
ORF EntryO_BomoN4EE12091_complete:A_BomoN4EE_TR30064_c0_g1_i6
Sequence
(Nucleotide)
GGCGGGATTCGAACCCGCAACCCCCTTGTGTAGTGACCGTGTCACTTACCACTACACCAG
ACGGCCGTTAGTTCGAAGACGGTGGTAACCATTTGACACGAAATGTGCTGCCAAGTCGCT
TTTATTCGACAGCTATAACCATATGTATGATATATTATACTCAACAGAAAATTCGACGTT
TTTCAAATGGTAATATTTCATTAATGGATTAGTTGAAATTCCTAAGAAGGTCTTTGACAG
CGTGCATTAATTCAAATACACTCAGAAGTTAATATTTAGTGATCCTGTCAGAAGTCTCAC
TTGTTGTGTACTCACTTTTTGCGTCGATGAGTCTTTCTCGTGGACTAAGGTCTGACGATG
ATAGTTGTTCCTTTACTTTAGCGACGTCCTTTGGATGTAAAATGTCGAACAGGCTCTGGC
CTAATAGTTCCGACTAAAATTAAAGCCCATTTGCATCATTTACAGTTATTAAAATGTTGG
TAGTATTCAGTTAACCCTTAATCAAGCTAACAGTATTTTCCACTTTTTATTCACTTCATA
ACTTATTAAGCCTGTCTTCCATTAAATATCAAATTTTTGTTCAGCGTTTGTCACTTTATT
ATTACTACTTTTTTGTGTAATATCGTTTAATTTCCTTAATGAATTCGTGTGAAATAAATT
ATCTTTCTCATTCCAAATCGAAATTATTACGAATTTTGGTGGTCATGTATAATAAATACC
TTCAGTCTTATATTTTATAGTGTTCTTTATACCAACCAAATATTACGTACACACCGGCGC
TTTTGTATAGTCCTGATTAAGGGTTAAAAGTTAGACATAATTGAGCACATACTTGATCGT
AATGAAGTATATTTTTGACCGAAGCCGAGACGTAAAGTAACCTGCCGCGATCGCATCCCA
CGACGAGCAAAAAGCAGTCGTGAGCCGCCTGGAGTATCAGTGCGTTTAGTTCTCGCTCAG
TGAGGTAAGTGGGACAGGGCCGGGCCGTCAAGGGGCAGGCCGAGAGCGCGCCGCGCACCG
TCCTCAAGTGTTGAACGGCCATGCGGAGGACTGTCAGCTTGTCCAGCTTCCGAGCCATGG
CTCCGCACATCGGTATCATGGCGCTCAGTTCCGATATAAAAGTGTTCATTTTATCACGTC
GCCGTTTTTCGATCTCGCTATGATTTTGTTTTTTGTCGGGAGTGCCGCGCGTGGTCGCCG
TGGTTGTAGTTGTTGTGGATCTTGAATCTTCTTCGTCGTCATCATAAGCGCTTCCAGTTC
CATAGGACGATGGTTTCCGTTTACGAGTACTGTTGGTCCGAGTCCGCGGCGTGTGTCCGT
GTGGAGACTGGCGCTGCGAGTCGCACGGCGATATCTCATAGTTTTCAGGAACGTAGTGAT
TGGGTTTTGTTTTCCGCGGATCATGATGGAGTTGCTGTGAGGTCTGCGGCACTGGATGAT
GAAGGGGAGGGTGCGGGGTGATGAGGGCGCCGGCCGAGTCGGCGCACGCGCCGCCCAACC
CCACGCCCCCTTCCGGTGTCATCTCATACGCCTGTATCGCACTCGGGTTCGCATGTCCAC
GTTGTGATGTACTAGCCTCGTCGATAAAATCGGCCATTCCTCGTATAAGACCATGGAAAC
TTCACGAATTTGCCCTTGTTCCGCAACAGTCAATACTCTTTAACACTAGCACTCGAGTTA
TGTTTTTTGATAATCTAAGCACAATATCCGTTTGATTTACAGATACAAATACCGACGAAC
CGGTTGAATGTTACGGAATTTTAAATATTAATTAAAATAAAATAAATTTCCAAATTATCC
GATGTTACTTTCGTGTCTGTCAACA
(1825 bp)

- SilkBase 1999-2023 -