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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30040_c0_g1_i5
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		transient_receptor_potential_cation_channel_subfamily_A_member_1_[Bombyx_mori]
Ontology
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0007602 P phototransduction
GO:0007638 P mechanosensory behavior
GO:0009408 P response to heat
GO:0009416 P response to light stimulus
GO:0010378 P temperature compensation of the circadian clock
GO:0015276 F ligand-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0023041 P neuronal signal transduction
GO:0033038 F bitter taste receptor activity
GO:0034220 P ion transmembrane transport
GO:0034605 P cellular response to heat
GO:0034703 C cation channel complex
GO:0040040 P thermosensory behavior
GO:0043052 P thermotaxis
GO:0046957 P negative phototaxis
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0050896 P response to stimulus
GO:0050960 P detection of temperature stimulus involved in thermoception
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050968 P detection of chemical stimulus involved in sensory perception of pain
GO:0055085 P transmembrane transport
GO:0097604 F temperature-gated cation channel activity
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:0.15 TPM:0.20
ORF EntryO_BomoN4EE11782_complete:A_BomoN4EE_TR30040_c0_g1_i5
Sequence
(Nucleotide)
AGCATTTTTTATCAAGTTATGCAATTATAAATCGACAATAATAATTTAATATTAAAACAA
CAATAAAATATAATTTTCTATTTTAAAATTCCGTTTGTCGCCGATAGATGACGCAAAAGC
TGAATCGCGTTATCGTTGTTGTTACCCATGAAATTATATGACATATTTTGATAGTACCTA
AATCGGTGTTTAGACTTCTTACTTTAAACACTATACAAGCGCAACGTATGAATGTGTGAA
AAATTAATATGACCAAACCCAAATTTTACTGGCTGTAAGACGTTATTGTAAGATCCCACA
GCTAGACAACACTAGCACACAGCACACAAAGCCACAAATCATTAACCATTAGATTTTAGC
ACTCGAGATATATGGTGGGATTCATGTTGTGCTATCTACAAGCTTTAATGAATAGACAAT
GTTGAAGTTGAAGTTGATGTATGTTGATACCAATGTTGAAGATGTCGGTTGCGTGTTTAA
TCAATAAAGTCTTGTCGGGCCAGACTACGTCGTATATTCATTTGTGGAATCACACTTATA
TTTTACAGCTTATATTGTTGTTTGTACCGCAAGTCTAATTTGAGGGAGGTGATTTTAGGA
CGTTCTAAAGTGTCCGGTACCGGGTGCTTAAGGCCGTGATTGCGGAGTGACTGGAGAGCA
ATAAAGGCTTAAACTGCGATTTTTCACGCCGCCAAATCGTGTGTGACCCAATAAAAAAAA
AATTAGAAATCTCAGAGCTACGTGTTGTGATGAATGAGAAATATCTCTATTTCAATTTGA
AACTAAAAAGATGCGCAAATCAGGTCGACTTGTTAAATGAAGCAGCTCGGGCCGAATGCA
ACTTCTTGCGGTTCCTATGAGAGCTCCAGCGGGGAACCACTTTAGTGTCATTCGGCGATA
CGCCTTCGTCCACATCGTCGGCTTCGGTTTTGATTTCCATTTTCTGCACAATTAGCCGGA
GTAGTAAATATTGTTGGTCCAATACATTCTGCATCTCACGGAATTTACGCTTCTGCTTTT
CCATTTGTTCCGTTACGTAATCGTCGTTGTTCTCCAAAACTAAGTCCAAGCCAGCTGATT
TCAAAGACATTGTAAACAAAATAGCCATCGTTGAAAAATACTATTTGGTTAATTTTTTTC
TACTAAACAGCACTCATTCAAGACTTATTTCGCTTTGCTAGTAAATCTTACAGTAATAGG
GCACTTAATTATATAATAAAAATGTGTAACCAAATCTATATGTACTTACTATCTTCTGTG
AAAGGATTACAAAACCATTTATGCAAGATTAAATCCAAAAATCCGAGTTTACATTTCTTA
TTATTTGGGTATTCGATCAGTTCTAGTTTGTCGACTTTCTCCAATAGGAATGCTGGTAGT
TTTCTTTCAAGTTCGGTATGTAAGACGACCTGCATAGCCAGCCGTTTCAGCTGAGCGTTT
CTCCTAACACTCTCAATATCACCAACGGCCAAACCAATAAGCAAGTTCATTAGAAGTATG
GGCATCAAAATCATGAACAGAGCAAGGATTATGAACGTCGGTATCGGGAAAGGCAGAATT
ATATCAGAGTCATCCTTGTAGTAGGGCTGCACATAAGTTCCGACAAAATCTAATTCACCA
AGCATCATAGCGAATGTTCTCATCAAAGCAATAGGGATGTTGCTGAAAGAAAGGTGATTC
CCTTTAGAGAGCAAAATGTAAAAGGCCAGGCCGAACGCGATGATCAGAATGGAGAAAACC
ATCAACACTTTGATGAGAGTCTGGAGTATTTCGAGAAACATCACAACGTAGATCCCGACT
TGATCGAAACGTTGGAGCAGCAATAACAGTTCGAACCAAGACAGGAATACGGTTATCGAT
GCCGCTGAGAACTGATAATTACTATAATGTCCATAGAGAGTTGGAAATACTGTTATAGTG
GCACTAATATACAATGTCCAAGATACAAGGTTAGATGGGTCCACTATGTAATGCCATTTT
TGCTGCTTTAAATTATATGCTTCCCGCATCATACAGACGGAAATATAAACCATAATAACC
ACAGAGCTTGTATACATAATTAAGATGGCTTCGAAATCTGCATCAATATCCCAGTTTGTT
TGTGTTCGATTTGTAGCGGTGTAATTGTAATAGACATCACCAACCCGACTCCTTTCCCTT
TTATTTATTGGATTCACGTGCTCCATCAGAAGATATGAATACACAGTGACGAAGATCAGG
AAAATACAATAGAACAGCACATTCACGAGATGAAAGTATTTTCCATAGGAATTCCACTTC
ATTTGCAGGTATTTTTGGCTCAAGGGATGCGCCAATAGCTCTACACGCCCGTGTGCTACC
ATCGCGTTGAGAGCCGGTAAAGGTATTTGCTGGGCCTGTTGAGATTTCCTAGTTCCGTCC
TCGTCCATCAATTGAGGGCAGAGCGCCTCGAAGCTGTACTTGATCTATAGTTTTTAAATT
GAGATATCTATAGTTAGGAGCGTTTTCAGTCACATCAACTCGTCATGCAATTGTAACTAC
TGATGTACTTACAGGATTGAAGGCGGAAGACTACCGTCGCGCAACAAGTCTAATGTGAGT
GTGTAGGCAAAATATTTACTACAACATACGAAGCAGTGCTACGGTGAAGAGCTTGAAACT
TTAAAATTAACCTCATTTAAGCGGCACAATAAGTAAATTAAGAGGATATTCTGATCTCAA
AAATTGATAAGACTTTTTTTTATATTTTCAAAGTTTTGATCTGTATGATGCTGAAACATG
TGTTTCAATATTCGAATTATTTTTAGAGATAAAGCGGTTTTAAAAGCATTAGACTACAAA
AAAATATTTGTAGACCAGAATACACCCTTAAAATCAAAAAGCCAAAAGGTCGAAATGACA
ATGCTTGCGTCAGGTATAAAACGTTACAGAAATTAGGGGAAAATAACCTTTTTGTTTCCG
TATCACTTACATATAATACACTCGATGACGATGTACAGACATTTTCGGTACACACACAAC
AAGCTTTCTACTGTTATATTTTATTTTATGTTTATTTAAATAAAATAAAAAAAATACATA
CCCTAATATTTGATAAATGCGTCAAATTCGATACAACGAAAATGTTACCTTTCACGATGA
TTAAGCTAAAAGTTTATCCGCTATCCAGACTTACATAGAAGCTTTTTGAATCCTTCTTGC
AGTTGGCTTTGGTAATGCACTTATCTTGTACAGCTTCAAAGACTCGCGGCATGTAGGCGA
TGAGAGCCAAGGTCACGCAAGGATGGCGATCTGAACGTAAGGCCATAACTTCTTTGGCTC
TTTGCTCATGAGTGACCATAGCAAGAGCGGCTTCAGGGAACTTGTAGTATATAGCGTAAT
CTATTGCGCTCATATCCATATTATTATAGCTTAGTCGACAGCCCATAGACAATAGCAAAG
CAATGGACGACGGCTTATTCTCCATTGTGGCCAAATGAAGAGAAGTATTCCCATCCTTAT
CAATCTGGTCCAACAAATGAGAATGAACAGAATGCAACAGTTCAATGGTTTTTGTATATC
CACTCATAGCGGCCAGATGCAAAGGGTTTCTTCCATTATGATCTCGATGAAGCAAGGCCC
CGCGGTTTAATAATAAGTGCACGACTCTTGTATGTCCTTCGCGTGAAGCTATATGTAAAG
GAGTTAGGCCTTCGCCGTCACTCTCATTGATAATGAAAGTGCCTTTATCAGAATCGAGGA
GTTGACAGGCGGTGTGAAAGCGTCCGTATCTTGCAGCGAAATGCAATGGACTCTCATTGT
TATTGTTCTTGAGATTGATGCAAGCTCCCAAGCGTATCAAGTTCTCCAAAGACCTGATGT
GACCTTCACGACTCGCGTAGTGTAGTGGCGAGCACCCGGTGTTGTCTTTTTCGTTCAACA
GTTGTAAGAGACTTTTCTCGCAGTGATCCTTGCAGCTCGCAGCGAAATCCTCTAGGCGAC
CACCATTCATGACGACCAGATGCAACACGTTGCGACTGTTTATGTCCTTTAGTTGTATGT
CAGCACCCAAGCGTATCAAAGTGTGAACCGTACGCCATCCCGCCCTAGATGCAGCCAAAA
GTAAAGGGGACCTTCGCTCCTTATCCAGAGGGTTGATATCAGAGCCTTCGTTGATTAAAT
AGTTTACGATCTCCGGGAGGTCGAACATGGCGGCACAATGAATAGGCGTCATTTTCTGTA
CGTCACAGGATGTCAGACACGCATGCTTCTCTTTTGGTTGCATAGTAAACATTAACTTCA
CGATGTCGAGTGCTCCTTGAGCGCAAGCTAAGTGCACAGGTGTTGACAGATCATGTTGCT
GTGTGGATATTTTTGCTCCGGATCGAAGACACAGCTCTACGGCCTTGATATCACCTCCAT
GAACGGCTGAGTGTAAAGGGACGTTGCCTTCGTTGTCGTAAAGGGAAATCATTTGCTCCC
TAGTACACCCTCTTTGTTCGCCCCACTGCAGGAACACTTCTATAGTCCTTGATGAAGCAT
TTTTTTGCCGCCTCGTGAATGGGATAGTAACCGTTGTTGCAAGGCTTCTTCCATTCAGCG
TCCAGATCGGTTATCAATATTTTGGCGCAGAGATCGTGGTCGTGTATTGCAGCGAAATGA
AGAGCCGTTCTGCCGTGTTCGCCACCTTGGTTGACGTTGAACAAGGACTTGTACTTCGCA
AACACTTGAAGTACGGATACCTTATTTAGTTCAGTTGCCATGTGTATTGGAGCTTGACAC
TTCTCGTTGAGGACAGAAGTTTCGACGTGTTGCTGCAACAAATACTCTATAGCGTCGAGG
GCTTCATTCTCGACAGCCACGTGGAGCGGTGTGTTCCCGGCGTTATCCTTAGCGTTAAGG
TCTCCAGCGTAGTTATTGATGAAATGCAATATATTAGTGTTGTTTCGAGCAGAGGCTTGA
TGTGCAGCTGTACGACCCCTTCCATCGCGCACAGCAAGACGAGAAGGCTCACTGAGGTAC
AATCGCATGAAGTCATCGACATTTCCGCTTTCAGCAGCCTGAAATAATTCCTCAATAGTC
GCTTTACTGATGTTCACAAGTCCCAACATCTTAGACCAATGACGGGGAAGTTTCATCGCG
CCACTTTTTAAATTTTGCAAATTTTTCAAACGTCTCGATTGATTGAACGAACCCATAACG
GACACTTTTAGAGATTATATTTAAGATAGGCCCGTTGTTCCACAAAATGTCATGACTTCG
AGCAGTGTGATAAATCGACTTGACCCGAGATTATTTATGTGGCTGGGACGCGGGCATCAA
CAACGACCGC
(5290 bp)

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