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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30040_c0_g1_i4
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		transient_receptor_potential_cation_channel_subfamily_A_member_1_[Bombyx_mori]
Ontology
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0007602 P phototransduction
GO:0007638 P mechanosensory behavior
GO:0009408 P response to heat
GO:0009416 P response to light stimulus
GO:0010378 P temperature compensation of the circadian clock
GO:0015276 F ligand-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0023041 P neuronal signal transduction
GO:0033038 F bitter taste receptor activity
GO:0034220 P ion transmembrane transport
GO:0034605 P cellular response to heat
GO:0034703 C cation channel complex
GO:0040040 P thermosensory behavior
GO:0043052 P thermotaxis
GO:0046957 P negative phototaxis
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0050896 P response to stimulus
GO:0050960 P detection of temperature stimulus involved in thermoception
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050968 P detection of chemical stimulus involved in sensory perception of pain
GO:0055085 P transmembrane transport
GO:0097604 F temperature-gated cation channel activity
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:0.89 TPM:1.18
ORF EntryO_BomoN4EE11778_complete:A_BomoN4EE_TR30040_c0_g1_i4
Sequence
(Nucleotide)
AGCATTTTTTATCAAGTTATGCAATTATAAATCGACAATAATAATTTAATATTAAAACAA
CAATAAAATATAATTTTCTATTTTAAAATTCCGTTTGTCGCCGATAGATGACGCAAAAGC
TGAATCGCGTTATCGTTGTTGTTACCCATGAAATTATATGACATATTTTGATAGTACCTA
AATCGGTGTTTAGACTTCTTACTTTAAACACTATACAAGCGCAACGTATGAATGTGTGAA
AAATTAATATGACCAAACCCAAATTTTACTGGCTGTAAGACGTTATTGTAAGATCCCACA
GCTAGACAACACTAGCACACAGCACACAAAGCCACAAATCATTAACCATTAGATTTTAGC
ACTCGAGATATATGGTGGGATTCATGTTGTGCTATCTACAAGCTTTAATGAATAGACAAT
GTTGAAGTTGAAGTTGATGTATGTTGATACCAATGTTGAAGATGTCGGTTGCGTGTTTAA
TCAATAAAGTCTTGTCGGGCCAGACTACGTCGTATATTCATTTGTGGAATCACACTTATA
TTTTACAGCTTATATTGTTGTTTGTACCGCAAGTCTAATTTGAGGGAGGTGATTTTAGGA
CGTTCTAAAGTGTCCGGTACCGGGTGCTTAAGGCCGTGATTGCGGAGTGACTGGAGAGCA
ATAAAGGCTTAAACTGCGATTTTTCACGCCGCCAAATCGTGTGTGACCCAATAAAAAAAA
AATTAGAAATCTCAGAGCTACGTGTTGTGATGAATGAGAAATATCTCTATTTCAATTTGA
AACTAAAAAGATGCGCAAATCAGGTCGACTTGTTAAATGAAGCAGCTCGGGCCGAATGCA
ACTTCTTGCGGTTCCTATGAGAGCTCCAGCGGGGAACCACTTTAGTGTCATTCGGCGATA
CGCCTTCGTCCACATCGTCGGCTTCGGTTTTGATTTCCATTTTCTGCACAATTAGCCGGA
GTAGTAAATATTGTTGGTCCAATACATTCTGCATCTCACGGAATTTACGCTTCTGCTTTT
CCATTTGTTCCGTTACGTAATCGTCGTTGTTCTCCAAAACTAAGTCCAAGCCAGTATCTT
CTGTGAAAGGATTACAAAACCATTTATGCAAGATTAAATCCAAAAATCCGAGTTTACATT
TCTTATTATTTGGGTATTCGATCAGTTCTAGTTTGTCGACTTTCTCCAATAGGAATGCTG
GTAGTTTTCTTTCAAGTTCGGTATGTAAGACGACCTGCATAGCCAGCCGTTTCAGCTGAG
CGTTTCTCCTAACACTCTCAATATCACCAACGGCCAAACCAATAAGCAAGTTCATTAGAA
GTATGGGCATCAAAATCATGAACAGAGCAAGGATTATGAACGTCGGTATCGGGAAAGGCA
GAATTATATCAGAGTCATCCTTGTAGTAGGGCTGCACATAAGTTCCGACAAAATCTAATT
CACCAAGCATCATAGCGAATGTTCTCATCAAAGCAATAGGGATGTTGCTGAAAGAAAGGT
GATTCCCTTTAGAGAGCAAAATGTAAAAGGCCAGGCCGAACGCGATGATCAGAATGGAGA
AAACCATCAACACTTTGATGAGAGTCTGGAGTATTTCGAGAAACATCACAACGTAGATCC
CGACTTGATCGAAACGTTGGAGCAGCAATAACAGTTCGAACCAAGACAGGAATACGGTTA
TCGATGCCGCTGAGAACTGATAATTACTATAATGTCCATAGAGAGTTGGAAATACTGTTA
TAGTGGCACTAATATACAATGTCCAAGATACAAGGTTAGATGGGTCCACTATGTAATGCC
ATTTTTGCTGCTTTAAATTATATGCTTCCCGCATCATACAGACGGAAATATAAACCATAA
TAACCACAGAGCTTGTATACATAATTAAGATGGCTTCGAAATCTGCATCAATATCCCAGT
TTGTTTGTGTTCGATTTGTAGCGGTGTAATTGTAATAGACATCACCAACCCGACTCCTTT
CCCTTTTATTTATTGGATTCACGTGCTCCATCAGAAGATATGAATACACAGTGACGAAGA
TCAGGAAAATACAATAGAACAGCACATTCACGAGATGAAAGTATTTTCCATAGGAATTCC
ACTTCATTTGCAGGTATTTTTGGCTCAAGGGATGCGCCAATAGCTCTACACGCCCGTGTG
CTACCATCGCGTTGAGAGCCGGTAAAGGTATTTGCTGGGCCTGTTGAGATTTCCTAGTTC
CGTCCTCGTCCATCAATTGAGGGCAGAGCGCCTCGAAGCTGTACTTGATAGGATTGAAGG
CGGAAGACTACCGTCGCGCAACAAGTCTAATGTGAGTGTGTAGGCAAAATATTTACTACA
ACATACGAAGCAGTGCTACGGTGAAGAGCTTGAAACTTTAAAATTAACCTCATTTAAGCG
GCACAATAAGTAAATTAAGAGGATATTCTGATCTCAAAAATTGATAAGACTTTTTTTTAT
ATTTTCAAAGTTTTGATCTGTATGATGCTGAAACATGTGTTTCAATATTCGAATTATTTT
TAGAGATAAAGCGGTTTTAAAAGCATTAGACTACAAAAAAATATTTGTAGACCAGAATAC
ACCCTTAAAATCAAAAAGCCAAAAGGTCGAAATGACAATGCTTGCGTCAGGTATAAAACG
TTACAGAAATTAGGGGAAAATAACCTTTTTGTTTCCGTATCACTTACATATAATACACTC
GATGACGATGTACAGACATTTTCGGTACACACACAACAAGCTTTCTACTGTTATATTTTA
TTTTATGTTTATTTAAATAAAATAAAAAAAATACATACCCTAATATTTGATAAATGCGTC
AAATTCGATACAACGAAAATGTTACCTTTCACGATGATTAAGCTAAAAGTTTATCCGCTA
TCCAGACTTACATAGAAGCTTTTTGAATCCTTCTTGCAGTTGGCTTTGGTAATGCACTTA
TCTTGTACAGCTTCAAAGACTCGCGGCATGTAGGCGATGAGAGCCAAGGTCACGCAAGGA
TGGCGATCTGAACGTAAGGCCATAACTTCTTTGGCTCTTTGCTCATGAGTGACCATAGCA
AGAGCGGCTTCAGGGAACTTGTAGTATATAGCGTAATCTATTGCGCTCATATCCATATTA
TTATAGCTTAGTCGACAGCCCATAGACAATAGCAAAGCAATGGACGACGGCTTATTCTCC
ATTGTGGCCAAATGAAGAGAAGTATTCCCATCCTTATCAATCTGGTCCAACAAATGAGAA
TGAACAGAATGCAACAGTTCAATGGTTTTTGTATATCCACTCATAGCGGCCAGATGCAAA
GGGTTTCTTCCATTATGATCTCGATGAAGCAAGGCCCCGCGGTTTAATAATAAGTGCACG
ACTCTTGTATGTCCTTCGCGTGAAGCTATATGTAAAGGAGTTAGGCCTTCGCCGTCACTC
TCATTGATAATGAAAGTGCCTTTATCAGAATCGAGGAGTTGACAGGCGGTGTGAAAGCGT
CCGTATCTTGCAGCGAAATGCAATGGACTCTCATTGTTATTGTTCTTGAGATTGATGCAA
GCTCCCAAGCGTATCAAGTTCTCCAAAGACCTGATGTGACCTTCACGACTCGCGTAGTGT
AGTGGCGAGCACCCGGTGTTGTCTTTTTCGTTCAACAGTTGTAAGAGACTTTTCTCGCAG
TGATCCTTGCAGCTCGCAGCGAAATCCTCTAGGCGACCACCATTCATGACGACCAGATGC
AACACGTTGCGACTGTTTATGTCCTTTAGTTGTATGTCAGCACCCAAGCGTATCAAAGTG
TGAACCGTACGCCATCCCGCCCTAGATGCAGCCAAAAGTAAAGGGGACCTTCGCTCCTTA
TCCAGAGGGTTGATATCAGAGCCTTCGTTGATTAAATAGTTTACGATCTCCGGGAGGTCG
AACATGGCGGCACAATGAATAGGCGTCATTTTCTGTACGTCACAGGATGTCAGACACGCA
TGCTTCTCTTTTGGTTGCATAGTAAACATTAACTTCACGATGTCGAGTGCTCCTTGAGCG
CAAGCTAAGTGCACAGGTGTTGACAGATCATGTTGCTGTGTGGATATTTTTGCTCCGGAT
CGAAGACACAGCTCTACGGCCTTGATATCACCTCCATGAACGGCTGAGTGTAAAGGGACG
TTGCCTTCGTTGTCGTAAAGGGAAATCATTTGCTCCCTAGTACACCCTCTTTGTTCGCCC
CACTGCAGGAACACTTCTATAGTCCTTGATGAAGCATTTTTTTGCCGCCTCGTGAATGGG
ATAGTAACCGTTGTTGCAAGGCTTCTTCCATTCAGCGTCCAGATCGGTTATCAATATTTT
GGCGCAGAGATCGTGGTCGTGTATTGCAGCGAAATGAAGAGCCGTTCTGCCGTGTTCGCC
ACCTTGGTTGACGTTGAACAAGGACTTGTACTTCGCAAACACTTGAAGTACGGATACCTT
ATTTAGTTCAGTTGCCATGTGTATTGGAGCTTGACACTTCTCGTTGAGGACAGAAGTTTC
GACGTGTTGCTGCAACAAATACTCTATAGCGTCGAGGGCTTCATTCTCGACAGCCACGTG
GAGCGGTGTGTTCCCGGCGTTATCCTTAGCGTTAAGGTCTCCAGCGTAGTTATTGATGAA
ATGCAATATATTAGTGTTGTTTCGAGCAGAGGCTTGATGTGCAGCTGTACGACCCCTTCC
ATCGCGCACAGCAAGACGAGAAGGCTCACTGAGGTACAATCGCATGAAGTCATCGACATT
TCCGCTTTCAGCAGCCTGAAATAATTCCTCAATAGTCGCTTTACTGATGTTCACAAGTCC
CAACATCTTAGACCAATGACGGGGAAGTTTCATCGCGCCACTTTTTAAATTTTGCAAATT
TTTCAAACGTCTCGATTGATTGAACGAACCCATAACGGACACTTTTAGAGATTATATTTA
AGATAGGCCCGTTGTTCCACAAAATGTCATGACTTCGAGCAGTGTGATAAATCGACTTGA
CCCGAGATTATTTATGTGGCTGGGACGCGGGCATCAACAACGACCGC
(5027 bp)

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