SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30034_c0_g1_i2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
Ontology
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:10.26 TPM:13.67
ORF EntryO_BomoN4EE11738_complete:A_BomoN4EE_TR30034_c0_g1_i2
Sequence
(Nucleotide)
AAAAAAAAAAAAAAAAAAAAAAAACATCTGTCTCTCATTAATCTAACAGTGACTGGTATG
GTGTAGCGATGGACGATATACATCGATTTATTTAAAATACTCGATGTATAGTAACGATGC
ATCGTCTTGAACCGATGTATTGTAAATACTTCAACATCGAATATATATCGATGTTTTTCA
TTCGATGCATCGATTAGGTACGCAAATTATGAGATTACTATACTATGAGTGAAAAGAGAA
ACGAAACGTTATAATCAGTGCTGCCAATATTAATTAAACCAAAACAACAATATGGCCGAC
CGAGTTTCTGCTGTGTAAATGTATATTGTGTTTTTGTTACGATACGAGTTTTTGCCTTGT
TTAAATCTAAAAAAGAAACTAATTTATGAACAGGAATGTCAGGTATGTGTATTAATAAAT
AGAATAATGTATTTAGTGATAATGATAATGGTTTTGCTAGTGAAACTTTACTGGAAATGA
CACATTGTTTTGTTGTCAAAAAGTACAAAGCAATTATTATATTTTACGTTTTATATTGCG
CGTGCTTATAACTAAGATATAAAAGAGAAGATTATGTACCTACTTTACGACGAATGCATT
AATTTCGCAATATGATACGATTTGATTGAAAGGTTATATTTTTTACCGTGAAATAATAAT
ACTATCTATTGTAGTGATGCCAAGTTATCGATAATTACTATATTAATATTATCGATTAAA
ATGCGGCTTATACTTATTTGTATTCTACTAGGCAGTTAATAGGTATTATTATAAATTCCC
TGTAAACAGTCCTATATAGTTTTGTTTCTTACTTTCAGTTATAATGGGACCTAAGAAAAA
AGTTCCGTTTGGCAGTTCTTTAACAAAATTGACGATAAGAAAACGAAATGCAAACTATGT
CAAAAGGAAATTAAGTCTGCTGGAAACACTACGAACTTAATTGGACATATTCGTAATGTT
CATAAGGCTGCTTATCTCGAAATTCAGCCGAAACAAACTACATTCAATGCAGTAACTACT
ACAGACGAAATATCGAATCCTCTGGATCTGGATACCAAAGTTACGCCTTATAATAAAATG
GATGATGGAGTACTTCAGTTTCAACCTGTTCCAAGTTGCAGTGGCAGTCAAAGATCCGGT
GCACCGTTACCAAAAACCGTAAATGAAACCATTGATTCAGACTTAGACGAAAACGTTACA
CCTTTAAAACGCCAAAGAACAATACAGGCCGCTTTTAAAGATATTTCCTCTTACTCAGAA
TCTGGAGCGAAGACAAGGAAACTGAACAACTGTTTGTTATTCATGATTTGCAAAGACCAT
CAGCCATTCTCAATCGTTGAAAACGAAGGCTTCAAAACTCTAATGAAAACAGTTGCTCCT
CAATATAAGCTCCCGAGTAGAACAACTCTAAGACGCTGGCTGGACGATAAATATGAAGTA
ATTTCAGAAACAATTAAGAAAATGTTGTCCTCTATAGAAGATATAACCCTAACAACAGAT
ATTTGGTCGGATACCTTGAATATGAAAAGTTTTTTGGGCATCACAGCACATTTCGGAATA
GACATTGAACTATATTCAGTCACCTTAGGTGTGTACGAATTGGATGAAAGACATACATCA
GATTATCTTTCTGAAATTCTCTTAAAGGTATGTCAAGACTGGAAAATCGATCAAGAGAAT
GTAACAGCTGTTGTTACTGACAACGCAGCCAATATAGTTAAGGCGATCGAATTAGCGTTT
GGTAGAAGGAAACACATCCCATGTTTTGCCCATACTCTGAATTTGGTGGCTGAAGGCACA
ATGATATGTATTGAGTGGAGAAACATTGTTTCTAAAGTAAAATCAATAGTGACTTGGTTT
AAACAGAGTTGCATTGCTAGTGATGAATTACGTAAAGCTACTGCTGCGGCTACGGAGTCT
TCTGCTGGAGCAGCTGAGGTAAAATTAATACAAAGCGTGGATACTCGCTGGAACAGTACA
TATTATATGTTACAAAGATTTCTAGAACTCCGTAGTGTCATAAATGATATTCTCTTCCGC
CACCCTAGAGCACCTGCAATGCTGAGTGCATCGGAAATATCTACTGTATCGTCTGTCATC
ATGGTATTGCGACCCTTAGAAGCGGCTACAAAAGAAATTTCAGGTGATAAATACTGCACA
AGTAGTAAAATTATTCCCTTAGTTCGTTGCATGCTCTCTAAAATAACTTCAGCTGTTATA
GAAGATCCCGTAGCGAAAGAGGTGCAGAAACTTGCTATTAATGAAATAAATAAAAGAATG
GGTTCAATAGAACATGTGAATGCTCTGGCTATCGCAAGTATTTTAGATCCACGGTTTAAA
AGAATGCATTTCAATGATCCGATAGCTTGTTCGAATGCTGTTACGAAAATTAAAGATTTA
ATGAAGAAGAATTTGCATAGCAATGAAGAACCTGAGTCCGATTCTGACAAGTCCGATAAA
AATGAAGAGGCCTTTTCATTATGGACTGATCACCATAAGTTAGTGCATCGTAACTGGAAA
ATTAACAAATCTGAAGACGTTTTGTCTGACGAACTTTCCGTTTATCTCCGAACTCCTGTT
GGAAGACTTAAAGAAAATCCGTTAGAAATTTGGAGAGATTACAAAATACAATTCCTGAAG
CTGTACAAAATAGCTTTTAAGTATTTAACAATAGTTGGCACGTCAGTCCCTTCAGAAAGA
CTTTTTTCACAGGCAGGGCTAGTTATGACTGAACAAAGAAACCGGCTGAAGGGGAAGAGA
TTAAGCAAACTTTTGTTTTTACATAGCATTGACAAAAAATATTGGAATATGTAAAAAAAA
TGTGTTGTCTCGGTGATTTTTAATTTTAATACATATATTTCCTGATTAATACATATTTTT
GTTTTAATTAATGCCTAACCTAAAACAATCGATATATAAGAAACATCGATGTATTTCCCA
ATACATCGTATTACCATCGATGTGACCGATCGATGCATCACATCGAAAAAAACATCGATG
TATATTTTAAACGTCCATCCCTAGTATGGTGGCGATTACTCAGTTAACATTATTTCATTA
TTTATTGTATCAGTTCTGTTATGAATTTTAATTTCATATTAGTAGTTGACAATTTTAATT
TTAATAATTTTGATTTAGTTTCATTTTTGTTTGTTTTTGTTTTTAGTCATTCTGATAAAT
TGTAATTTTAAATTTTATTGTATTTTGATTTAGATGTTATGTAATTGTATGTGACATTTT
ATGAGCTTAAGTTGCCTGAAATAAATGCATTTCATTAATTCATTCATTAGTACTAACTCT
CGAGAAACACCAAAGCGGATATTAGCAGATAAAATAATGTACATTAAAAACTCAAAATGC
TTAACCTTTTTTTAAATTTCTATGTTAAAACAAAATATTACAGCACCGTAACAAAATTTC
ACATTTTAATTTATAATCAATGTTATATAGAAAAATAATTCTAGTATGAATACCATCACT
AAGTTTTTTAAATAATATTCAGATAGACAACAGTAAATATAAAAAAACATGTGCCCTTCT
GCACTTATTGATATATAAATACTTTTTTGAAATTAAATTGTTAATTGTACTACAAATCTG
TGGATTACAATATACTCAGCAGTATGTTTATATAGTTAGATCAAATAGTTTTCCATATTT
ATCTATATAAGAACTAATGAATCAGTCATCCCAAATTTCATGGTTTGGGTCAGTTTCTGG
TAAATATTCTTTCTGCAATATTATCTTGGGAGTGGTGATCGAGGCTACTGTTTTTGGAGG
CTTCTCTATCGGAAATATAGAGGTCTTAGAAGGGCAGTTCAATACGTGAAACTTCATGTC
TTCCTGGGTATACCTGTGTGTTGCGTTGTAAGGGCACGCAATCATTGTTGGGTTTATCCA
TTCACATTTGACAATATGGCGCTGCAGCCGTGATCTTGGTACGCGGTGAATTGGATTGTA
AGGGCATGACACGAAGGGATCATCCATTTCGCTCCTGAGATCCGTACGAATCCAATTGTT
AAATTTGAAACGTTAAATTTATAATTAGAATCCACTGGAATCTATGTTGTAATAAAGTGA
AACAAAATTGAAGCCCCCGGTTTTTGCATTACACATTTCCTTTTTTTTTTAATTTGGCGT
CGCGCGGTTTGCGAATATGCCATTGACAAAAGCAGGGAAACGTTTATCACGATTTAAAAG
GACATTACTCACGGAATGGGGTTGGCAACTG
(4231 bp)

- SilkBase 1999-2023 -