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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30033_c0_g1_i1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_2-like_[Papilio_xuthus]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
Transcript
Level		FPKM:5.36 TPM:7.14
ORF EntryO_BomoN4EE11734_complete:A_BomoN4EE_TR30033_c0_g1_i1
Sequence
(Nucleotide)
AGCCAATGGAGTCATAGTTGTCTTCTAAAATTACATAGCAGAAGAAAAAATATTTTCCCT
CACGTATACAGTCCATTTTCAAAGAAATTTCGACGAAAGTGTTATGAGTTGTGTACGGCG
CGAGTGAAAAAAATATAAAACAGAACACCAAACGTTTCAGACATTGCGTTTTCCGTGTGT
AACATAGTTACTTAGTAACGGAGTTATTTTATTAATTCTGAATCAACCAAAGAAGAAGAT
GCAAAAAACACGTAAACCATCCAGAATCAAAGCCAATATTAGTTATTAAAAACAATATTT
AGTACTAAGCGTACTATGTATTTTGTGTATTAAATAGAAAGTATTTAATAGTCTTCAAAA
TGTCTTTAGTTTCTTCGTCAAGGCTCGAGGGATCCTCGTCCAGCCTGTCGGGGTCCTACC
GGTCTACCTTGACCTCTTCGTCAAGCCTAGACAATCCTTATTGCAGGCCACGTAGTGGCT
CATATGCAACTTCAACTCTCCGATCTTACGGAGACACCGTCACCGAATACAGATCCAGAT
ATTCCATCGACAGTAAAGGAGATAAGAAGTCTCTGATAGAATACTCTAGAACTTCCAGAG
CTCCAAGCGTGACGGATTCGGACAGCGGTATCTCGTCCAGGCATCGTTCTGACAGAAGCG
AGTCCAGGTCTAGAGATATTTCGACGACAAGGAGCGAGAGCGGCAAAACTCTAAGTGACC
CCCCGTCTAGAACGAAAAGAAATTTCAGCTCGTCGGCTTTCATGAGCACGGCCGAGCTTT
ACAAGTTGTATTCGCCCTCGAACTACATACCGTTGACGCAGAGAATACAGCAGCAACAAA
AGCTTCAGAATCAGAATTACGGGGAGATATCGAGATCAAAGTCGATCTCGAACGACATCG
GTAGACCACCAGCAGCCGACCCATCACGCGCTCTAAGGAAAGCCAGGAACTCGGCTATCG
GAACCACATCTGAAAGAACCGAAAGCCGACGTTACAAGGATAGTTCTCCGACGTCGGGCT
ACACGAAACGAAACTCCCTTACGAACGGAGTGAGGGACAGTAATGGCAATGAACTACCAT
CTGTGCCCGAGATGCGAAAGAAGTTTGATCCGAAAATGGCCGTCACCAAACTACCCGCAA
ACGAGAGTAGGTACGCGAGTAGGAGCAACGATGAGCGGTACCTGAATCAACTCAAAGACT
GCGAGAACGGTACCGTTGGGTACACGAAGCTACGTCCCAAAGACGACAAACCGGTACCCG
TTCATCTGCCTTACGTCAGCCGGAACGGTACGTGCAAATGGGAATCAGGCTCGTCTAGTT
CGCGGTCGAATTCCAATTCCGATCTGTCGATTAACAAAACGGCGTCAGAAAGCAGTATTT
CGAAGTATCTTCACGATAAACCTAACGGCGCGAGTACGGTCTTAACGTCGAAAATCCCGC
CCGACCATTTGACGAGCGTCAAAAGTCAACTAGACCCCAACAATCCAATAGGGAAGATTC
TAGAGAAATCGACCGTGATCCAAGTTCAAAATGGGGACGTAGATTATGCGGAACGCAAGA
GAATACGCAACAGTCCCGAAACGGTTAACAAATCGAAAGACAACATTAAAAACGACATTG
AAAAACAGGTCAAAAGTCAAAGGCACACGTCCGATTTCGCTTCGTACATACAAATATCGC
AGCCGATCGCCTCGGGCACGTCCGCGCTAAAGAAAATTGAAAATCACGTTAACGAGGAAC
CCGTGCCCACAGAGACGCGTAAATCTAGAGCCGGCCTCAAATACATAGATTCCGAGCAAG
AGAATGTATCGCTGAACAATGAAATCGAATCTCCAAGTGAGACGGGCTTCGAAAATAAGA
CCTTCGAACACGAGAATTATCTTAAGAAGCGCTCGGAGAAGAGCGAAGGAGACTCGAAAG
AGGAGGATGGAGCCAAGTCCATGGAGACCAGCGTTGAGAGTACTCTGAGCGAATTGACCG
AAGATTCTAGTCCTGAAACTCCGTCTACAAGAAGGAAGCTCTTGGATAAAGAATACGATG
ATGTAAAAGGGGAATTGGCCGGAGGCAAAAGCGGTCCTAGCGGCCTGCGCCGGAGCACCG
ATCGATCGGAATCACTCTCCGAATCCAGGAATGAGCGGCAGTCAAGTCACACCAGTGGTC
TGAACGGCCTCAGGAACATCGGCAACACGTGTTTCATGAATAGCGTCCTCCAGTGCCTGT
CGAACACCAAGCCGCTGCTGGAATACGTCTCCGAAGACAAGTATTGCGATGACATCAACA
CTTCGCTGTCCTGCATGAAGGGGGCCCTCATCAAAGCCTTCGCGACGGTCATCAAGGAGG
TGTGGCGCAGTGGTGAGCGTGACGGAGTCGTGAACACCACCGCCCTGAAGTCCCAGGTTC
AGAAGTTCGCGCCGCGCTTCATGGGCTATAGCCAGCAGGACGCGCAGGAGTTTCTTCGTT
ATCTACTGGAAGGGCTCCACGAGGACGTGAACAGGGTCACAGTCAAACCGAAGCCTATAT
TGACGGAGATCGACGACAATCTAAGCGATTCAGCCAAGGCAGCCGAAGCGTGGAGCCGCT
ACCTGAGGATGGAGGACAGCCGCGTGGGCGACATCTTCGTGGGGCAGCTGAAGTCGACCC
TACGCTGCACCCACTGCAACCACGACAGCGTCACCTTCGATCCATTCTGGGACCTGAGCC
TGCCGATTCCGGCCCGGACCGGCAACCTGAAGCTGCAGCAGTGCCTACAGCACTTCGTGC
GCGAGGAAGAGCTGGACGGTGACGAGAAACCGACATGCTCGAAGTGCGGCGTGAGACGGA
AGTGCCTCAAATGGTTCACGGTGCAGAAGTTCCCTCAAGTGCTGGTCTTGCATCTCAAAA
GGTTCTCCCCGACGGAGCGGTTCCGCGGCAAGCTGAGCGTGGTGGTGGAGTTCCCCCTGA
GCGGCCTCGACATGTCGCCCTACGCCGCCGCGCGGTCCGGCGCGCCCGTCTACAACCTGT
ACGCCGTCAGCAACCACTCCGGTACAACGTACTCCGGCCACTACACGGCGTACTGCAAGC
ACCCGCACACCGGCGACTGGCACGAGTACAATGACTCTAGGGTAACGCCCATCAACCCGT
CCAACGTGGTTTCGTCGGAGGCCTACGTGCTCTTCTATGAGCTTTCACGTACGTAGCGAA
AGCTCAAAGCCCGCCCGCTCGCTGGCTCCGCGCGCCAGTGACAGTTGACAGTGACACGCG
TCACGCTGGACGACGGGCAAGGGGGTCGTGACACTTGATAAATGTTTTTTTTTTATACTC
TTTTGTTTTGCTGACGGTACTTTTTTGTGAGTGGAGTTTTTTTTTTATAAAACGAATAAA
TTATTTTGTTGTTGAAAATGAATCGTCCAGTAGAATGTCGGGTAAATAGTGGTGGGTGTG
GCGTTCGATCATGCGATGGCGTCGCGGGGTCGCGTGTTCGAGCTCCGACGCGACCAGAAT
ACGGACGACAATGTTTAAAGGGAAAATCTTTTAGTCCTCCTTTTGGAGACACATTTTTTT
ATTTCGAACGCTACAATCAATTTTTTTTAATAAAACTCGAATCCGCGATCCCGTTTTCGG
AGAGCACATGTTAACTAAGTCAGCTGGTAGTTTCGTTTGGAAGCTCAATAGCGTTTTTGA
CGGGGCTTATAAATTCGAAGAGTAACTATAAATAATCCTTTAGTATAACTTACATTTTCT
ATCTGACGGTCATGACTTAGTAATTATAAACAAGAATTCAATGTACGGTCCCGTTGTGCT
TCAGACGAAAATAATATTCATGTACATTTAACCAAGTTAATAGTAAGATTAGTGATTTAA
TTTTTTTATTTGCATTGCGCATTTACATTGCGTTTTTAGTTGGGAATAAAATTAGCACTC
CATTGCTCGCTCTCCGCGTTCACTCTTGTAATTTATAAGCCCGAATATCAACGTGCGCTG
TTGTTGTCCGCGGGCGACTGATCTGAACCGTCAAGTGTCCTTCTCGCTTGTCTTAAAGTT
TGACCGCAAAAGTATTTTTTTTTTTTCGTTTTAGAGCATTACACACAAAAAATATGAAGC
CTTATCCCGTCAATGATTGTAAATGAACACACAGTGACACTGCAATTATATTATTTACAT
TTGAAATTCCTATCAATTTTAGTCATTTTGTAAATAAATAAATTAATATTAATAATATTA
TTAAAAAAAAAGCTTTTATAAAATAATACACATTATATAAATAGTATACATATATCTATA
TATTTAAATACGCAAATTGTTAATTGTTTGTTGATGAATAAAGGA
(4305 bp)

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