SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29552_c0_g1_i1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_histone_deacetylase_11_[Papilio_xuthus]
Ontology
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070062 C extracellular exosome
GO:0070932 P histone H3 deacetylation
Transcript
Level		FPKM:0.24 TPM:0.32
ORF EntryO_BomoN4EE11604_complete:A_BomoN4EE_TR29552_c0_g1_i1
Sequence
(Nucleotide)
ATTCAATATTGATGTTTTCGCAAAAATGGGAAATTCGCGAAATTGCGTTTTTCCGCGAAA
TGAAAATTCCAGAAATTTAAGTGAACATAAGTCTATAGTAAATTAAAAATTTTCATCAAT
CAATAAAATCAAATTAGAGAAAATGACAAGTCTGTACTTCGATATAAGCCAAGAGCAATG
GCCAATAGTATATGATGACAAATACAATGTTTCGGTTTTTGGTCTCGAGAAGTTTCATGT
ATTTGACGCTAAAAAGTGGCGGAATATTGTTCAGTATTTAAGGAATGCACAACTTATAAC
GGATGAACGCCTAGTGAAGCCAAAAGAAGCCCAGAAGAGTGATTTGCTTGTTGTCCATAC
AAAGCGGTATCTCAAATCTTTGAATTGGAGCGCAAGAGTGGCTATAATCGCAGAAGTACC
ACTTGTATCTTTATTACCAAATTTCCTGGTTCAATACGCTTATTTAAAGCCGATGAGGTT
ACAAACAGGTGGTTCAGTTCTTTGTGGTAAGCTGGCATTGGAGCGTGGGTGGGCTATCAA
TGTGGGTGGTGGCTTCCACCACTGCAGTGCTCAAAAAGGCGAAGGTTTCTGTCCGTATGC
TGACATAACGCTGCTGATACGGTTCCTCATGATGAATAACTTAATAGAGACTGCTATGAT
TGTCGATTTGGATGCTCATCAGGTAAGATTATTGATATTTTTTCTCAATATAGAGACTGC
AAGATTAAAATGAATACATCTG
(742 bp)

- SilkBase 1999-2023 -