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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29548_c0_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_visual_system_homeobox_2-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0043010 P camera-type eye development
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060040 P retinal bipolar neuron differentiation
GO:0060042 P retina morphogenesis in camera-type eye
Transcript
Level		FPKM:1.57 TPM:2.10
ORF EntryO_BomoN4EE11598_complete:A_BomoN4EE_TR29548_c0_g1_i1
Sequence
(Nucleotide)
GTTTAATTTAATAAATATATTACATTTCTATGACGTAATCGTGTAAGTACATATAGTATT
ATCATTAAAGTATCTACGTTCATTGTTTCGCTATCGGAAATATACAAAATAAGGTTTAAT
CAAACAAATTCAAATATCACGCGATCGTTAAAGATGAATAGTGTGCTATTTAAAAAAAGA
CTTTTTTAAAGCATTTTATTTTAATCGGTTAATCTACCATAGAGTTACAGAAATACATGA
TGCGATAAACCAAAATAACAATGTCTATAAAATAGAATGGTCACAGAGATACATGTAATT
TATTAAAAACGTTATTGTAGCAAGAGAACACTAACATTAGATTAGCCAAAATACGTGAAA
CATAACAACCAGAACAATGAAAAAAACGGCCATTTTGTTTAAATTAAAATTATAAAATAC
CGTGAAATTTTCGTTGAGAATGTCTGTTTTTTTTTTAATTTATCGCTGTCTACGATATCT
AGTTTCATGCAACCTTAGTTCCTGTAACATCCGTTAGATCTGTTGTATCTCTTTAATTTC
AACATATTTTTATTTTAAAGAAAGGTGACATGAAACTTATAGAAAATTCTTTTATAATTT
TTAAGGTAAAGTCTTTTCTTGGAATGTTTTCGATGTGTGATTTCGTTCGATACGAGAAGA
TTTGCTTGCCATTTGTTTGAGTTTCACCAATTTGTGATGCTGACTGCTTAGAAAGATTCT
CACTTTTTTAAGTCCGAATTTCTCAAAAGCGCTTACAAAGAGGTTTTACAAGTGAAATTG
TAGCTATAAAAAGTAGGTATATAGGTTATAGCTTTTATTTTGATCAGAAAAAAAGTAACA
CAAGCATTGGTTACTTTGTAGTCAGCATCACAAACATTAAAACGGCACACTTACAAACTA
TTTAGTACCACCAACATTAACACCGTATTTTCACAGTCGATTTCTTTTGTTGGTAACCAC
GACACTGAATGTATAATATATACATCAGCCGTCATGTCCAGCCAAACTAGACTGTGGAAA
CACAGTGTTACATCTTAAACAATTTACATAGTCTTTCGCTTTAAAACTACAACAGGGCAC
AAAATATTGAACTAGTTTTCTTAATTTATACAATTAATTTTTGGTACGAGTCGACAGAAC
GAGACAAGAAAAAATAAAGAAACGTGTGTTATACCTAAATCTTTCATGTTCACTTAAGCA
AAGGTGTGAAGCGGAATTTCAATACTTTCGTGGTAAAAAAGAACCATAATAAAATGTATT
GTATACTAAGCGATTCTTAAACAAAATAAATGTTTGAATCACCCGTTTTCTGGATCTGTG
GTAATGTCATGACACATTAAGACATCTGTCAAACTTATTAACTGTCATTTAAATCATGCT
TTAGACTCCGAATCGTTCCCACGTCGACTCGCCAAATAATCTAAGAACTGGAAACTTTAT
ACAATCCTATCTCAATCCTACTGCAGATAAATACTTAACTAAATGTATTGCACGAAGAGG
ATTCATTTAAATACGCGTAACAATAATTTACATAATTACACTTGAGTTGAATCCGTAGTT
TGAAAGGCGCTGGTCATGCGGACTGTTAGTTGTTACAGTGGAGTGAATTGCAGTTTATAC
AATAATATAACCAAAGACAGAGAACATGAACATTTTATCGCGTGCTGAAATTTATAATAC
ACTCACGTTATTTATAGTAGGTATGTGCTAAAGCTCTTAGAAGAATCGATGGTAGAATTT
TCGCAACAAAAAATCTCGCATAGAACGCGAATGCATTTCATAGTGCACTCGCATAGTTGT
GCATAATTGCAAATATGCATTTATGTTTTTGTGCATAACATTGTGCAGACTCGACTCGAT
AAACTGTAGACAAGGATTTCAGTTTGTTTATGTAGACAGCTCTATCAGTGGAGTATTTAT
ATACAACTTTGTTACGAATTCTATCAACGATTTTGAATAAACAAAGTTTTGTACATACTA
AAAATAACGTTTATTATTATAGTAAAATAAAAATCAAGAGCGCTCTTTTGATCCGCGTCA
ATCTGGACTCCGTCGCCGACATCTTTGATTATGTCAAACCAGCGCGTCAATATGTCATTA
CGTTGAGCTGTCAATAGGTCTGTCAATACAAATGCGCGGGATGGGTCGTGGTATCCAGTG
GTTGCTCCGTGCCCACGTCTATGTCTCCGGGACCGTCGTCTTCCGCATTAGGAGTGCTGA
TCGGAGTGCGAGTTAGGCCACGGACCTGCATAAGTAAGTTATTGGAGAGTATTCTAGCCT
GGTGCTCTTGCGCCTTGGCCCGCAGACAGGCGATGCTGTTGTTGCGGAAGGCGTCGGGGT
CGTCGCGCGCTGGGTCGGGCGACGCTCGACCCCTAGCCGACGACGATGCAGTAGTACTGC
TCGCTGGAGAGCTCTGCGCCTGATTTTCGTGAGGATGTGGAGAAGTAGACGTTGCCCTGT
CCGCTTCCGGTTCAGATCCCTCCCGTTCCGACCCTGATTCCTTGAGGTGACGAGCTGCCT
CTATCGATTTTCGGTGCATTCCGAGCAGCCACGGCGCGACCGAATCGTTTTCCTTGGCGC
TGTTGAGGATGGTCTCCGGTAGCGGGAGGGAATGTCGCACCATCGCGCCGTACAGCCCGT
ATTCGGCCATTATGGTGGACCGACCCCAGCACTTCTCAGTTTTGCGCCATTTCGCTCGAC
GGTTTTGGAACCAGACCTGGATCCGATCTTCGGGCAGGTCGGTTTTCAAGGACAGCATTT
CTCTAGCGTACACGTCGGGGTAGTGAGCGTCTTTGAAGGCCTTCTCCAGTTCGTCCAGCT
GATATGAGGTGAAGATCGTCCTGCTATGTCTACGTTTTTTCTTCTTCTTCTTCCCATTGT
ATCCTGTGAGGCCGTCTACCGTGAAGTCTTTTGCCGCTTCCAAAGAAGACACGCCTGTGT
AAAATTGTCGGACTGCTGTCAGATGCGGCTGCGAAGTCGGACTATAAGGAGACTTGATCT
GCGGGAATCCTGGTGGATGATGCAGTAATGGAGGACCCGGGAGGAAGGCTGCTGCTACTG
CGGCTTGAGCATTGAAAGCTGCTGCATAGGCCACGCGACTCGCAACAGAGGCCGGCAGAG
GAAACTGAGGAGTGTAAGCCGACCGGGGCTCTCTGCTCTCAGATAAATTGAGTACTCTAT
CTCCATCTCTGCTCTCGAAGTATCTCTCTCTGCTCTCCCGATTATCGGAGAGACCTAGCA
GCTCTTGGATGGCGAATGGAGAGCGCTGGGGTGCTCTGGGAGCGCTTGCGTTAGCGCTCA
TCGCTTGCATTTTGAGCGAAACAGTATCTGACCACTCGCTACGATCTCAGCTTACATAAC
TGAAGACATGTATCTTTGTCTTGTTTTTTTTTTGGAATTTTTATCACAATATTAGACCAT
TCGTTTACAAGTCACACTAATTCAATGTTTGAAAATTCACTTAAAATTATTAAACTAGAG
TAGATTAGGCCTCGCTTAGGCTACAAGTTTACTTAAAGTTAGAATTTAGGTGCGATTGAA
ATTCGCGGAAAATTGTTGGTATCGTGTTAAAAACGCGACACGAGCGCTCTGTCCGGCGTC
CGCAGCGCTTCTGAGCGGTACACCGCCGGGCGCTTTGTAAAAAC
(3644 bp)

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