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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29538_c0_g2_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		PREDICTED:_U3_small_nucleolar_ribonucleoprotein_protein_IMP4_[Papilio_polytes]
Ontology
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0034457 C Mpp10 complex
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:1.09 TPM:1.46
ORF EntryO_BomoN4EE11571_complete:A_BomoN4EE_TR29538_c0_g2_i1
Sequence
(Nucleotide)
GTATTGACATATCAATAACATTTTTTGTCCAAATGCACAGATTGCCACCTTTGATAATAG
ACGACTCATCTCTAACAAATAAAATTATCGTTACTCGATATTTGTGACGCAATTGGCTAT
CTAAGTCTAATTCGCAAAATATACAAACATTTATACAACTAAAGAGGTGTTTTGAAGTAT
TTTGGTTTCAAATATAATATTATTGTCAAAATACATTAATATTTAATATTCGATGACTCC
GGCGCTCCTAGTACCAGCTACGCTACAAGAATAGTTACATCTAAACAAATTTACATCTAC
AACAACAACAAAATTTACAGTCCCACCGTGAATCGAACCCGGACCCCCAGCGGCTCCAAC
GATCAGAATAGTATACGAGAAGACTCGCGTCGGTCGGACGAGAGTACTACCAACCTGACG
GTGAACGATCACCGTGGTTTATGGATTCACACTGCCTTCTCGACGGATGAGAATGTTTAC
CATCGAATTTTTTTATAACGCCATCTGTCGCTCGATATGCGGACCACGGGCTTTCTCTAC
CACAACACATAAAATCCAGTGAATTATTCAGTTTTGATCCGTCGTTGGTAACCTTGTGAA
GTCCGCGATGCTACCCAGCTGGAGTACCAGGCATCACCAGGTCTCGACCTGGAGGCGACC
TTGCTCCTGCAGGCTGCGCACGGCGTCGCTGCTGGCGGCCGCGCTGGTCCCGGAGCTCAC
CCGGATGACGTCAGCGAGCGCCTCCCGCACGTTGTCCGGCATGCTCTTGGCGTTGCCGGA
TATGAACACGTGGGCGTTGTTGTTCAGCAGTCGCCAGATCGTCTCGCGGTTCTCGAATAT
CTTGTGCTGGACGTAGATCTTATCTTCCTGGTCTCTAGAAAAAGCGCAGTACAAACTCAA
GTTCCCGTCTCCCACCATCCCCTCCAACTCTTCCCTGCAGTGGTAGTCCTTCTCTTTGTA
CCGACACCCGAAGAACAGATGCATGATGTCCTTGGACGCTGTGCCGTAGTGAACCCTTTC
TTGGAGCAAACTCCTGAAGGGAGCGAGCCCCGTGCCTGGCCCCACCATTATGTGAGGCAC
GCTCGCATCATCAGGAAAAACAAAGGTCCCCTTTTTGATCCACCCGTAGACCTTGTGACC
GGGGAGCAGCGCCGCGAGCCAGTTGGAGGCGAGGCCGAGGCGCGGGCGGCGCAGCGCCGT
GCGGTACCGGACCGCCGCCACCAGCAGCTGCAGGCCGCGCCCCGCCGCCGCCGCGCCGCA
CGCGCTCGCTATCGAGAACGAGCGCGGCTTTATAATCGAGAACAACTCGAACAGCGTCTG
TATGGTGAGCCGCGCGGCCGAGCGGTGGAAGTCCTGCAGCACTTCTATAACGGTTCTCTT
CGTTCTCCTACAGTAATTCAGCCAGTCCTCCTGACCCTCTGGGGAACTGAGCTCTATACA
TTTGTCCCTCTCTAACTTGTCCTGGGACACGAGTGCCAGAATGGAGAAGACATACTGAGT
GGCGTAGCATCGCAGGTCCCAATACTGTTCGGCCACTTCGTATAAAGTCAAGGGGTGACG
TAGGAACTCTGGCACAGGCATATCTGGAAGGATATTAGTAAGACTGATAATTCAACGAGC
TCATCTCTCATCAGGTTTTAAGCGATCACCTTTGTGGGTTTATAAGTAAAGACTTCAAAA
TTAACTCTGATTGTGAATGCCCAATACTGATAGGACCATGTAAATTTCAAGATGATACAA
AGTGATATTAAAATAGAGCCGATTAATGTTTCCTTCAAAATTAATGTCATTCTTGTCTTA
TAAAAATACAGGACATGTTTTTTAAAAGTAAACAACTTCATTATATATGAAAATATTTAT
TCATCTTGTTGCCATCCATCATCATCACTGAGGAAGCGTCTCTTGGCAGCCGTATTCATG
TAGGGGCGAAGCGCCCACTCGGTGTCGGCGGCCGTCAGGGATTCCAGGGTGCCGAGCTTG
ATCTCATATAACCTCATTTGGAAACGTGGACCCACTTCTGTTAATTCAATATCCTTGCCT
GCCTTTTTATATGTATGTTGCCTGAAGCATATGTAATCATCATGGTTCGCAAATGATATA
ACTCTCTTCGAATCGGGTTTTGGTACAGGAAACAGGTACTTTAATATACTCATTGTACGT
AAACCAAGATTACTCTTAAAGTTATGGAATATGAGATGTGGATACTGTTCACTCATTGGT
CCTATATCGGGAATGTCATGTCTCATCACAACACCCGATAATGTGAAGGATGCTGTTGGA
CCATATGGGAGGTGGCATATTACCAAACTGTCTGGAACTCCTCGATGCTCGTGCACAACT
ATGAAATCTGTTACATCATTGGCTCGACAGGCATGAATCAATTGTGACATTTCATAGCCA
CCTCTGTTCATACGCTGACTGTTAGGAAATATTAACCTCAGTTCTTTTACAAACATCTTG
AGCCTAGCACTAGGCTCTCTTGATGTGGTAATCATGATCTTCGGATCCTCGACACCTGCA
TATCTGTATTCATCATCCTGTGAATTGAGTGTGTTTGCCCCACCACTGAATCCTCCGATT
ACCGCCACTCTTTCCGGTCCTTTATCTTCATATTCAATTCTCTTCTGTAAGGCGATGGCA
TCCTTCCGTAAATCACCATGTATAGGTATATTCTCTTCAAGACTACGTTTGATTTGATCT
TTTTTAGCTTGTATACTTTTTTGTTTTTCTTCAGCCGATTTCCGGTATAAATACTCGCGG
CGTAATCGCGCCTGTCGTCGCAGCATTTTTGGTTTGTCGTTACTATAGTTGAATTCGATA
ACCAATTTTATTTTTGTTTAAATTAATGTTTCAAATGTTTGTAAAAAGCTACAAAAAACG
CGGGTGACAATAATTGACAACTGACGTTTACGCATTAGTTGTTTTTTGTGATTGACATTT
GGCGTTTCGTTTTTGCTATGTAATAGAATTTTATTACAAGTTAAAATAACTTGCAACACA
TGAATACTAATGAATAGACCTCAAGTTGTTTTGTTTGGAACGAACCGGCCACGAGTCGTC
TGAACAGTTATTTTTTTATCATTTGAGGATACGTTGAGGGATACGCAGTTTGCCTTTAAA
AATTTTGCCCGGCGACACCACATTGGTGTCATAAGCATATCTCCGAAATTTCAAGAAAGT
AGGGGAATAGGGTTGAGAACTTATGAGAACTAATGAACTGATGAGATTAGTAACATTAAG
TAAATTACAATTTCCCGATAATGTCAAGAATGGCCGGCGACAAGCTAAGTAATCCGAACT
AGCGCTGCCACCGCAAAGGGGATAAATTTACGAGACGTGCGGACGGCACTTTTAAGTTCA
AAACATAATTTATTTGACTGTTTTTTAATTGCTGGCTGTTTATTTAATGACACTCATCTC
ATATTTGCTTTCTTGCTTCAATAATCTCGATAATTTTCTCGCATACTGTCTTAAGATATA
GAATAAGCTACCAGAGTGAAATATTGCGATACATATTATTGACATTTAAAAATATACTAT
CCAGCCACTATTCTATAGGAGAAGCATCTTGTAAGGGGACAAGTTGAAAAAGTGTCCACC
TGTATACAGCAAGTTATTGTTGGAAGACTCACCAAAGTAGTGCTAGTGTAGGAAGTGGAA
GAGATATGAATATAGCAGACTTAAAACAGAGTGAAGTGTGTCCTTATTTCTACTCCCTTC
TATAGAAGTATTTATACATAAGATCAATTAATGGTGGACAATTAGATATAAGCAATCAAT
TGTTCTGACTACCAGAACACAACATATAATAAGATTATTTTGCCCAATTTAAATCAATGT
TTTAACACGTTTAATTGTAATCTTTTATTTCAGATAAAAATGCTTACCATCATGATATTC
TTCAACCAGTAATCTATAATGGGGCTTAATATCAATATTGTTACTTTCAAGTATGTTAAA
TAGATCATCAATATCCTCCTTTGAGTTCCGAGGTCTTATATTGAAAACATCACCAGGTTT
GTAGGTTAAGCATTTACCAACAGATTTGAATGATATTAATCTTACATCCTGAAAATGAGA
TTCATCCGTAGTTCTAACATTACTATCCACCTCCAACAACAAAGCTTCTTGGTTATTGCT
GTTTTCGTGACCAAAATATATATCTTCACAAAATCCACTTTTAACATCAGCTTTGTCCTT
CAACATAGAGACCTTCCAACGAGGAATGAATTCTGATTTTACATCTGTCTGTATACTCGG
AAAATATTCTTTGAGTCGTACAAAGTATTCTTTGATCCATGGGGAAACTACACCATCGTG
GCCCAGGTCATGTTGGTAGTCACATAAACCAACATCTATTAATGGTCTGGCTCCTAATTG
AATGAGGCGCTTGTGAAGCTTCTTAGCGACAAAATTGAACTCTGAATATGAAGAATCTCC
TAAGCCCAACACTCCAAATTTCAATTTAATTAACGAATTCGCCGGTAGATTTTTCCTCAA
CAGAAACTTCCAGAATTTCTTCATATTATCCGGTTCATCGCCTTGACCCGTCGTAGCGCA
CACAAATATCGCAAATTCTTCATGAATCAGCATAGAAATGGGATACTCGTTCATCGCTTG
AACGGGCCCGCGAAAACCCAAAGCTTTTGTCGTACGCCATATTCTTTCGGCTATTTCTTG
AGCCGTGAATGTCTGACTACCGTACAGCACCGTCAGTCTGCCTATTTGACACATAATGAA
ATTGAAATTAATGAGAAAACTTTAAACAGCTTTATGGAAACGATAGTTCTGAGAGGTTTA
CTCTAT
(4806 bp)

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