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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29523_c0_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		DNA_helicase_recq5_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000993 F RNA polymerase II complex binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0043140 F 3'-5' DNA helicase activity
GO:0051301 P cell division
GO:0051304 P chromosome separation
Transcript
Level		FPKM:14.48 TPM:19.29
ORF EntryO_BomoN4EE11527_complete:A_BomoN4EE_TR29523_c0_g1_i1
Sequence
(Nucleotide)
AGCTGCTAAGTCACTTTCTTTTTTTTTTTTCAAAAACAAAATTTTTATTTTCTTAAAAAT
AAGCATTTATATAATATAGATATGCAAAGGATAAAATTTAATAAATTAATATATACATTA
ACAAATAATTCACGTGTCCTTTTTCAGATTCAGCTTAGCTGCTAAGTCACTTTCTTTTTC
TATCTTCATCTCCTTTGTAAATGTTTTTTTAAGAATCATCGCAATTGCTGCCTCTTCAGT
AACTTGAATAGCTAACAGTTGATGCACGATGTGCCGGGCAGTTATTTTGAAAAGGTCGCG
GCTGCTAATCCTTTTCTTTTTATAATATGGCATTAACAATTTAACAACCAGACTTGCCAC
ATCTACTTTTTCTGCTTTGTTTGTGGATGGTTCGTTTGATTTCTTTTTGTGCTTCCATTT
TTCTTTTCGTATATCTTTTTCTTTGTGTTGGAGTATTTCATCCTTTTTCTTTAATTTCTC
GTTAACTTTAGCATTATCTTCCTGTTTCGAACTTAGAGTTTTCCGATGTTTGTGATCATG
TTTATGGTGATGTTTATCTTTTTTAGGATGACGTTCTGGTGATATTGGTTTATTTTTCGT
AGTACCATCATTCTGCTGCACGCCAGTACCGACTTCGCTTACGATAGGCTTAGGCGGCAA
ATCAGCAAATTGCTTTAACGATTCCAGCACCTTATCGGCTTCCTTGCTAAGCTTATATGC
TTTAGATAGTTCAACGTCGTCTGTGTCCATGGGGCCTTCTACAAAATTTAATTCTTCACT
TATGTTTTTATCTGTTGCCGACTCGTGTCGACTAAGCTCGACTGCTGTATCGTTACCGTC
GTTGTCATTGACCAGAGAATCATTGGGCAAATCAATGACTAATTCCTTTTCGGATTCACT
GTCTGAATTATAGTACAATGAGGGACCTTCTAATTTTACAACATTTTCAGCTTCCGTCTT
AACGAGTATTGTGCTATCATTGTGATGATTATTTTCATGCTTATCAACGCCTTTCACTTC
GTTTTGAATTGGTTTCTTAATATCATCTTTATGCCTACTTTCTTTTTTTGGAATATATTT
AACCTTTCGACTTTCGTCTTTAGTGTTTTTTTTACTTTCACTGTGAGACTTCTTATGTTT
ACCAGATTTATGTTTGTCGCTATGTTTCGACTTTTTTGATTTTTTAAATTCTATATCACT
TTCGTCAGAGTCCCCAAAAAGATCTTTGATTTTTCGTTTCGATCCCTTTTTACTTTCTGG
TGATTGAATATTCCTGTCACGGTCCTCTGCGTATTGTTCAGATGATTCCGATTCATTTTG
TATATTTTTGGAGGATACACCTTGCAGTGTTATATTAATAACTAGAGTCTTAGGTTTCAC
TTCTTCATCATCGGATGTTTGTTCACTGGTTTCGATTTCAGTAATCTTTAATGTTGTATC
ATTATGACTGTAAGACTTCTGATCTGTAGATTCTTCATTCAATTTCAATGTTGTATTGTT
ACAAATATTTAAACTATTTTCATCAATTACAAGACTATTTTCATTCTCACTTTCGCTTTC
ATCACCATTGGGAGATTTCTTGGATGTTTCTTTAAAGAAGGTTTTGAGTTTTGTTTGTGT
GAGTGGGTCTTTTTTAAACGAATTAGCTTTTCTTTTTGTTTCTTTGTCGGCCTTAGAAAG
AGGCCTTGCTTCGCTTTTAGACTCTACGTCATTTCTTAACTCTGATGCTTTTACAAAACC
ATCATAGATTTTACTTTCTTCTTTTTTGGATTTAGAGTCAAACTCTTTTAGCTGTGGGAA
AATGCAATCCTGACAAGCCTTTACTGCTGAAATCATTTTAGACATAGCCCGTCTGTAGAG
ACTCACAACAGTATGACTAGAGAATGCTTCATATTCCATTTCTACAGCGCATTGCTCTAT
GTCATTTTTTGATAATGGTTTATTTGGTTCGTCAACACCTTTCATATTGGCGAGATTATT
GCTAAGGACATCCGTGAGTATGATAAGGTAGCCTTCACGATTCGACAATGTTAAGCCATT
AACCTTCGTGGCTGTACTTTCGGCTGCTCGGCATTTGGAATTTTTTGCAGATTCTGGGGT
GTCGGTTATTTTTCTTTCTTCAACACGTTTTTTCCGTTCAGCAAATTCTTTTAAAATAAG
GGATTTGGTCTCTTCTCCGACCCGTCGGTGACTACTTTCTCCATCAGACTCTTCACTATC
ATGACCGATGCCATAGTAAGACTGCGTTTCCATTTTCTGTCCGTATCGGCCGCCTCCGTA
GAGATCGGGGTCGCTGTGGTCGGCGGGTGCGAAGCCGGCGGTGTGCAGCGAGGCGGAGAG
CGCGCGGCGGGAGTGCTGTTCGAGCGCGCGCCGCACGCTGCGTCCGTCGCGGCACACGTC
GCACCGCCCGCCGCACGCGGGACGCTCCTCGCCGAAGTACTCCGCGAACGTCAGGTGCCG
GCATCTAACATCTTCACAATATTTAACCATTATTTCATAACTTTTGTAGGCGTTCTTGCA
ACGTTGCTTTTGTTCGGGTGTTTTAGCTCGGCCGATTTCATTTTTGAGCAAAAAGTCAAC
TGCGTTTCTTTCACTGCGACAGTAGTAGATACGACAAAATGCAGGTTTACCGTCGCGACC
TGCTCTGCCGGATTCCTGATAATATGCGGCAACATTTTGCGAAACGCCCCAGTGAGCTAC
TGCTCTAACAGTGGCTTTATCCACTCCCATACCAAATGATAGTGTAGCGCACACACATGG
ACATACTCCCGACGACCAGGCTTCCTGCACTGCTATACGATCTGATGTCTTCAAACCTCC
ATGATAGGCTAGAGACTGCAAGCCCCTTTTTGTTAGCATATTTGCCAAATCCTCAGTCTG
CTCTCTTGTTCGACAATAAACAATTGCAGCATTTTTGTCTTTTTGTTTAACATTTTCATC
TTCCTTTAAACTATTTTTTAAGAATTCCATTAAGTGCCCTATTTCATCTTCAATACAATT
TTGATAAACCACATCATAAAATAGATTCTTTCTAAAACTAGGAGTCTTGTACTTTGCAAC
TGGTTGAAGCAATTTTAAATTTGATAAAATATCTTTTGCTACATCTGCACTTGCCGTTGC
TGTTAGAGCCACCCATGGTATTGATTTATATTTTTCTCTTAATTCCCCAAGCTTTAGATA
GTCTGGTCGGAAGTCATGTCCCCACTCGCTGACACAGTGAGCTTCATCAACAACTATATA
TGATACTTTTTTGTACTTGACAAGATGGTCTATGAGAGACTTGAAAGTGCCAGTAGCCGC
CTGCTCAGGAGTAATGTAAAGAAACTTTGTATTCGGCTTCATACTATGCAAGTCATTTAG
TACTCGCTCCTTATCTTTCACACTCATTTTGGAATTAATAGATTCAGCTGTTATTTTTAG
CTTAGTCAAATGATCAATTTGATCCTTTATGAGTGCCAGAAGTGGTGAGAAAACAATAGC
TAGCTTATTGTCTTGTAACATTGCAGGCAGTTGGAAACACAATGATTTTCCAGATCCTGT
TGGCATGGATACATAAACATCATGCACACCTCTAGTAATAGCTCTTATAGCTTGTTCTTG
AAGTTCACTTTTAAATTTTCGGTGACCAAAATATTGCATTAATTTATCCGTTATGTGATC
CATTTTCGTTATTTTTTTGTTGATCTTTCACAAATGAGTTTCGTTAAATGGTTATTCCAA
AATTGATATTTAAATACAGATAGAATTGTTAGAACATAATACATATTTCATACAAAATAA
TAATATTAGAAACGTACTATGTATAATTACAGATTATAAACACTGTCG
(3828 bp)

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