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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29501_c1_g3_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat_domain_phosphoinositide-interacting_protein_2_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006497 P protein lipidation
GO:0006914 P autophagy
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0034045 C phagophore assembly site membrane
GO:0034497 P protein localization to phagophore assembly site
GO:0043234 C protein-containing complex
GO:0044804 P autophagy of nucleus
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
Transcript
Level		FPKM:4.05 TPM:5.40
ORF EntryO_BomoN4EE11438_complete:A_BomoN4EE_TR29501_c1_g3_i1
Sequence
(Nucleotide)
AGTTTATTTTATACAAAAGTTTAGATCTTTTATTTATCGATTGAGGCACTACGAAGTCTG
CCGGGTCAACTAGTAAACAATAGAAACCATTTTCAAATTTCCATTGAACACTCCACTCCA
GTGACGTCACGAACGGAGGGTGTCGCAGGACGGGGGTCTATAATCGGTTTTACTGTTCGT
TTGGAAGGTACAACCACGTTGATACATTCGCTTGGTGTTAAGCAGATCCAATGTGATTCG
TTCAGACACATGATGATGACCAAGATGTCGGAAGCGTGCCCGGCGCGCGCGTCCACACTA
CACTCGAAATTCTAGTGTGGACTTCTGATTACTTCACTAGAAATATTACAAATAAATAAT
GACCACTGTCACGTGTGTCAGATTATTTACAGTCAAATAATTACTTTAGGATCTATTTTT
TTGCTTACTACTTGTCTGTAAAAGAATACAAATATTCATTTCCATTATATTTCTAGTCAA
GTAACAGGTAAAAGGGTCATTTGTTTGAAACTAAATAATGGCTTTTAAGATTAGGTTCGA
ACGAAACAAAATCAATTTTAGAAGTTAAGTTAAGCGATGGTGTAGGTTTCGGTGGTCGCG
GGGATGTTCGCGGAGAGCAGAGCGGAGCCGGTGCGAGGGACTAGGATCATTCAATCATAT
TTAACTTTTGCTTTCGGAAATCGCTAATGACCGATGATCATGTTTCTAATGACTATAAAT
ACTAAGCTAATTTCTACAAATTATTTCTATAGTAACAATACCGAAGCACAATCGAGGGAT
AAGCGCGGGTAAAGTAAAAGTAAAAAGAAAAGTAATGATTAAAATTAAAAACTATATTAA
AAAATAAAATTCGGTTTTTACAAATTATTATCACAATATTCACATAAATGTCCATTAAAA
TGAGCAAACTAGAATAAATCGCGACAACACGGTGACGTCACGCTCGTGATACACAGCCGC
CGGAGCCGGAATGGTCGGTAGTCGGTAGAGTACGTATAGCGGTGCGCGCGGAGTGCGGGC
GGCGGTCACTCGCGCCGCTCCTCCGCGCTCCCCGCTCCCCCCGCGCCCCCCTCGCCTTGC
GGGTCCGCGGAGCCCGGCGCCTCCTCCGGCGCCAGGAAGCGGTGCTGCCGCAGCAGCGCG
CACTCGCCGCCCTCCGCCGCGTCCAGCGCGTACACGTACAGCACCCCGGCCGACGTGGCC
ACCAGCAGCCGCGGACTGCGCGACACTCTCGTGACGGCGGCGACGGCGCGGTGGCCGGTG
GCGGGCAGGCGCGCGGCGGCGAAGGCGCGGCCCTGCGCCAGCACGTCGGCCACGTGCGCC
GGCAGGTAGCCCGCGCCCGCCGACACCGCGGCCGACAGCCAGCCCAGCCACGTGTCCGCC
TCGCCCGCCGCCGCGGCGCCCGCCGTCTCGCCCGCGCCGCCCTCCTCGCCCGCGCCGCCC
TCCTGCAGCTTGAACACGTGCACGGTCTCCGTGTTGGAGGTGGCGGCGAGGTACAGGCCG
CAGCTGCTGAAGGCGAGGCAGGCGATGGTGACGCAGCGCTTGACGCCGCGTCGGAACTCG
AACAGGCGCGTGCGGTCGGGCACGGCGAACACGCGGATGACGGTGCCGCGCTCCGAGGCG
GTGGCCAGGCGCCGCCCGCAGGAGGACCAGGCCAGCGCCGCCACGGGGCTCTCGTGCGCG
CTGATGGCGCACTTGGCGTTGAGGTGCACCGCGTCGAAGATCTGCACCTCGCCCACCGCG
CTGGAGCCGGGGTACGCCACGTAGCAGTGCTCCACGCAGGGCGACAGCGCGCACAGGCCG
CGCGGGTTGGGCGGCGTGTCGCGGATCGTGTGCAGGATCTTCATGTCCCGGATGTTGTGG
ATGTGCAGCGACTCCTCGAGGCACACGATCAACCTCGAGCGGTTCAGTTTGACGGCGAGG
ATGGTGTTGCTGTAGATGTAGTTGCAGATCTCGGTGCCCTTCTTGTAGTGGCACACTATC
AGCTTCCTGGGAGCGGATACTGTGACAACAGCCACCAGCGAGCTGCTGAAGAGACGGTCG
ACGAGACAAGTCTCCTGTCCGCTGCGACTCGCATATATTTCTTCGATACCATCATCAGGA
GTTAGAGCAAATAAGTGATATCCGGTGCTGCTGCCCGCCACCAATGACGTGCAATCTTGA
TTAAACTGAACGAATATTCCGCCTGCATTCGATCCCTCAGTGTTTGTAACTCCTCCCAGA
CTCATTGGAGCGATGGAAACGGACAGTGTGTTCTAAATAGGAACAATTAAACACGACATA
TACACACTGTTTATTTTAGTCGAGCACAAATCAGTCTTTCATTGAAATAAGTCAATTTGT
TAATGTTAATTCGTTCAGAGATATCTACTTTTTGACACAAAGAACGACCTTGTTTCTAAA
AACAAGCCCCCTCCCGCAAACTGCACAACTTCATAGTTTATTACACAAAAACATTCAACT
GCTGCGAAACGTCTCGGGGTCGGG
(2484 bp)

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