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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29473_c1_g1_i2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
Ontology
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
Transcript
Level		FPKM:12.44 TPM:16.57
ORF EntryO_BomoN4EE11366_5prime_partial:A_BomoN4EE_TR29473_c1_g1_i2
Sequence
(Nucleotide)
GTATAATTACAACGGCTGCCCCACCCTTCAAACCGGAACGAATTATTGCTTCACGGCAGA
AATAGGCAGGGTGGTGGTATCTACCCGTGCGGATTCACAAGACCTACCACCAGTAAATGG
ATGTATGTTTATTATGTACCACTAGATTCACTAAATAGACAAATAGAAATACGTAATTTA
ATAAATAAATATAATTTCATTGTTTTCTATTAACATTAGGATTCAGGAAAGGTTCCTATA
AATAAAGGCTATATTTGATGAATCTGGTTTCTAAACTATTTTGACAACCAGTGTCCAGAC
ATATGCAGTTATGAAGCTAAACCATTTGATCTAGTACCTTAGTTCACAAAGCCATACAGG
TCCAAGGGAAATTCAATGGGAGTCTTATGTTGGTATGACCAAAAAGTAGGGGGACCACAA
TTAGTCCAAGAACATTACAAGAATAAATATAACAAAAAATGTACAATTTGACTAGGAAGT
TTTTGAATGGAATAAGTGAAAATTAATTGCTTCCTTGTGCTGTTTTTTTAGCAACTTTAC
TTTTTTGACATAACTCACACAGTGAATGAGTTAATAATCCAACCAATTCTCCCAATTTAA
AAAAAAAACTATTAGTTAATGGTTGGAACTCAACCACAACTCAAATTTCCTTAGCTATAC
TAGATATAATCTTCAGGTTTTTTTTGTCATCTTAGGAATATGGTAGAAATGTAGCTGCAG
GGGTCCACCGGAACTACCTAAGTTTTGAAAGTGATCTATGAGAAAAGTCTGTGAACCTCT
AGTTTATAATTGATGTGTTTAATTTAAAGCAGGATACAGTTTCTTTTTACATTACTTATA
TCACTTCATTTCATTCAATATTATCAGGAAAGCGTTTAATGACTTTCGCTATGAACAATA
AAGAATGATGTCTGGCAGGAACTGAAGAGCTATTAAGTGAAATGAAAGTCCAGAGTTGGC
GGGTAAGAGTATAATTAAAGGAGCGCGGGGCGCAGCGCCAGGTCGAGGTCGCGGCGGCGG
GCCAGCAGGCGCGCGTGCAGGTGTCGCGCGGCCGCCTCGCCCGCCCAGCCCGCGCAGTAG
AACTGTGCGCGCCGCTCCTCCTCCGGGTTGCCGCTGGCGCCGCCGCTCATGCTCTTGAGG
TCTCTGGACTGACTGACGAGCCACTTCTGGATGAACTGCTGCGGATCCTTGCTGAAGCTC
AAGAAGAACTCGCGGTTTGTTTTCAACTGGTTGATGGTGTCCACAGTCTCGTGGATCTTG
GAGTCGAGGCCTTGGATCTCCTGCTGGTTGGCGGTGCTGAGCAGGAAGTTGTTCATCTGC
GCCTTGAGCGTGTCGTCCACCTCGACGTCGATGTCGTAGCAGGCGGTCTGCTTGGCGTCG
TGCGGCGGCTCCACGGCGATGACGTGGTTGATGACGATGGGGTCGGGCGCGTGCAGCAGG
GCGCCCAGGCGCGCCGGCACCTCGGCCAGCTTGACGCGCGGTGCCCCGAAGATCTGCTCG
AGGTAGCGGTCGCAGGCGATGTACTCGCGCTCGTGCGGGTCCTGCAGGCGGTGCGTCTTC
ACGTACTGCCACAGCGCGTTCACTATGACGGGCCGCGTCTGCGTGTGCACGCCCAACAGC
CGCGCCAGCCGCTGGTCCAGCTTGAACTGCAACGGCTGGTAGTCCAGCAGCAGCAGGATG
GTGCACCGCACGTTCTTGTAGCCGGGTCGCTTCACCTGGAAGCCGTCCGTCTCCTGCGTG
GTCACCGTGCGGTGCCACTCCACGAGGTGGTTGTCGGGCCCGTACAGATCTTTATCGAGT
TCTATCACCAGAGACTTGAAGAACGACGAAAACTTCCGCTTCACCTGCAACGGGACATTC
TTGTTCGGATCGTTCTTGGAGTCGTCGAGCAGACGGCCCTCCACGCGCAGCTCCCACGAC
GGCACCGCGTTGTCGCCCTGACCGGGGTAGAACGTGTTGGAGATGAATATTCGAAGTTTT
CGTTTCTGTTTCATGGGGCGTTTGAGGGCTTCTTGAATGTCGAGACGTTTGCGCATTATG
GTGGCGTCGAGTTTGCGTTCGAACGCGAGCAGGTCCATGTAGGCCTGCGACTCGGGCACG
AGGTCCCGCACCTTCTGCGGCAGGATCTTGTCGGCGAGGCGCTTCTTGCGCTTGGCGGAC
GGCTGCGAGTACGCGTCGTACAGCGGCTTGTGCGGCGGCGGGTGCGGGGCGCGGACCTCA
CCCCCGCGCTTCTGTGCGACGGCGGAGGGGGGCGCCACGGGGGAGGGCGAGGGCGGCGCG
GAGAGCACTACGAAGGAGTCCGTGAGGCTGGTGTCGGACTTGCTGGTGCGCAGGCCGCCT
TCTTCCCGCCCCTCCCCAGACGCGCCCGCCACCTCCATCGAACTGGACTCGCTTGATTCG
CCGATGCTCCCTCCACTTTTCCTGTACAACGGATTCGCCTTTGACTTCCGCCTCAGTATT
ACGTTTCCTTGCTTCTGAAGCTTACATCGGTGTGTCAGATTTTCTTTGTCATCATCAACT
TCCTTCTCATTGTCGTAATCCTGTTTGATTTCATCACAAGAATCGACAATATGTTCGTCC
TTTTGTTCAAATCTTTCATCGTTGTCACTGCAAATGTCTTTCTCGTCGTGTCTGCGAGCG
GACTCCTTTGCACTAGTTTCACACGCATCGGACAGAGAACTTTCCGATGCTGATTTCACT
AAACGACCATCAGTTTCTTGTGATAGACTCATCTGTTTAACCAATTCTTCAACCCTTTTG
ATAGCTGCCTCAGTTTCTATGGGCTGAGGATCATTAATCTTCACATCAGCGTCTATTGTT
CTCTCACTCTCTGTTCTCAACTCCTCGGTGTCCAGTTCCGATGATTTTTGTTCTTCTTTC
CCTTTGTCTACATCAGCAGAGCTCGAGGCAGGGTCAACACTAACATCGCCGCAGTCTAAG
CTTTCATCGGCTTGACTCTCTGATGTATCCGCTATGTAGTCTATGGACCACATCCGGACG
ACCCCGTCCGACGAGCCCGTGATGACGACGTTGAGCGGGTCCCACTCCCGGGTCTGGCTG
AAAGCGACGCACAGAATCTGATGCGACCGTTCACGCCCTCCCGCCGTGTCCACGCCGCCC
AGTAACGTGCCGTTGATGGACCACAGATACAACCAGCTGCCGCGACACGTGGCTATGTCG
CCGGTTAAGTCGTCGATGGCGAGCGCGGACACGGGGGGGTGCGGGCCGCGCGTGTTGTCG
GGCACCAGTTGCCGGATGAAGGAGCCGCGTTCGACGTCCCAGACGATGACCTGCCCGTCC
CGGCTGCCGCTCACCACCAGGTTGTAGGCGGGGCTGGCCGCCAGACACGTCACGGCCTCC
TCGTGACCGTAAAGACACACCTTGACCGACAGCCGACGCCGGCGAGCCAAATACTGCCAC
ACCGTTACGACGGTACTGGTGCCGGCGGTCACGATAGTCTTGGCCGAGGGGCAGACACAA
GCCACAATTTCCCCACAGGACTGCGCCACAGATTCGCACACGAACACCGCCTTGTCGTTG
TCGTAGTTCCCAATCCTCAACGAATGATCAGCGAAGCCCCAAGCCACGTACTTGTTGTAC
GAGGGAGGCATCAACACTTTGTTCTGTTCTACTGCTAGGATCGCTTTATCTGTATATAAT
ATTTGACCGACGGGCCCTTTCACTTCTTTTACTGGTTGTAAAGAAGGCCTCAGGTTTTCT
AGATTATGGAAGAACAATTTTTCAGGTGGAGTGATACCTTGAGATGGTATTATGTTATTA
GGATCTAATATCGTGGAGCTCCTTTGCGACATTTTTTTACTGGGATGAGCCTTTTTGAAC
AACTGTTTCGGGATCTGTCCAAAGTTATTTATGAAGCCAATGGTGGCGTTCTTTTTAAGG
GGATCATCAATATTGTAAATATCAACGTTTCCTTCGTAAAACAGATGATGGAATACGTTA
GATGAGTCAACTGCCGGTTGTCCTTGTTGTTTGTATCCGAAAACTAAGTCGATCCAGTGG
TGGAGTCTGTGAGAAACGTAGTCAGACTCCAGCGCGGCGCGGTGCAGACGTATGAACTCG
CGAGGATCACCCTTAGCCCACGGCGGCAACACCACGTCACCCAAGGCCACGCCGGACTGC
TTACAACCCAGATCAAAATTATTCGAATTGACTAAAAACTCTGGTAAATAAAAGAATTCT
GGAATCAATTCTTTCACGTCGGCCATATTGTGTTTAGAAGCTGAGTTCCACGCTTCCTTT
ATCGAATGAAACATTCTGTCAGCTAAATCAAAATGGCCGCCTTGAAGTCTCAAGAAGTGT
TGCGTGAACGGTTCCATACGCACTAAGTACGAGCACACGATCATGGCGGAAGAGTAGTGC
GTGCCGTAGTGATACGGAGGCGTCTCGCCGTGAGGATCGTCCCATTCCTTATATCTCTTC
CTGAATTGCTCCAATCGTTCAGGATTTTGTGCTCCCATTGGTTTAGTAAGATCTCGGAAC
GTCGCCGGGTCGTTGAGATCCAGCTCTAAGGTATCATAGTCGGCAAGAATCCACGGAAAC
ACAGGGTATTGCATGAGATCATTGTACGATCTCCCAGCGAGAGTATTTAGATGCATTAAA
TATTGGAAGTTTGATATTTCTCCTCTCAGCCACCGTTGCGTGACGGAGGTGTCTCCGATG
AGCGAGGCGAATAGGCCGGCGGGCTGCTCGACGGGCACGCCGCGCTTCTGTCCCGCCACC
GAGCCCGCCGCGCTGTCCGCCATGCCGGTCGCCAGCGCCGTGAACCTGCTGTACACCTTA
TTTCTAACTTTCCTGGGGAAAGCCAATAAGTAATTTCTTCCATCGCTGGAAAAAACTTCT
AGAGCTATCGGTTGTAATAAATATCTTCTTTTGTGCACTTCCCTAATGTCTTCATATAAA
AATTTAGAGCACTGTCGTTGGTTGCTCCGCTGTATCCCTTGGCTGGGAAGTATAGGTTCG
TAATCGTCGGGACAGCTGTCCAAGTCGCGTATTTCTCGATTTTTCAACAACGTAAACCCA
TCGATGACGTAACAATGCTCACGTCCGAACAGCAGAAGTCCTTCAGTCGTGTCTAAGCCT
TGAATTCTTGCGCAGCGGAACATATGTGAAATCTTTTCGTGGTGTTCCAACAGCCTAAGA
AGAGTCTGATTATCCGGAGGAGGTGTTGGTTGTTCATCTTCGTCTTCATTATCTAGGCCA
TCTTCGTTTGCTTCTCCAGAGGCTTGGTTCGTGCCCCGACTAACAACGCCGCTGCTGACT
AAATCGGAAGGCGACCCGTCCTCATTCGCCACCACATCCACTGAGTTTGTTTGACTCGTG
TTGGCTACGGGCTCTTCGAAGTTGTTAATTTCGGGTGTCTCGACGCTGTCGTCCTCGTCC
AATATAGCGCCGGCCGTCCGCCATTGCTGATACACGCGGTAATATTCCTTGCTGTCTAAG
CTTTGGGCGACTTTGTACTTTAATTGTTTGTTATCTGGGTTGTCGAGGTCGGCCCTGTAG
GGGTAGTGCGCGTAGAAGAGATGGTTCCGGCGCAGCATCTTGCGCATGCGGCAGGGTCCC
TCGGTGCAGTCGAGCGCCCACTTGTCGAGCGGCGCGGGTCGCGGCGGGCCCCACAGCGCG
CGCTCGCGGGTGAGCTCCCGCCACGCGCCCGCCCACTCCGCCTGCACGTAGCGCGTCGTG
TGCGCGCGCGTGTTGGCCGCGCTCGCACGCTCCTTGCACCACGCCTGTCTGACCAACTGC
ACATGGTCCTGCATGTAAGCGAGCGCGTGGTCCCTGGGCGGGGTGGGACGTTGTTTAGCT
GAATCCTCCTTTTTGACCTTCGTACGGGACGCAAGCCGGGTCAAACCGCCGGTCACTTTT
TGTATCTTGGACTGGATCTGATTGTGCAATTCCCACGGTACTCTGTATACGGCTTTTCTT
TCGGTGTCGATGTAGTTGATCCACAGCTTGTGAGCGCTTTCATTGAGCTGTTCCCTGACC
GTGGTGAGGTCGGGAGCGTGCGCGTTACCGACTGGCAACACTAATGTTATTTTGAAGACT
TCTTCTATAGCAGGTTTCTTGCACACGTATAACTCCTCCCACACTCTACGAGCCGCACCC
GCCATGAGATTACGTCCTTGATGAGTTGTCAACTTATCATCCCTAGATTCTAGATCTCCG
CTGGGGTTAACGTGCCAAGTGGTGCGCATGTGCGAATCTAAAGCGATCTTCATGTTAGCA
CTCAACTGCAGCAGGCAATACGTCAGGCAACCGATAAACTCCAACTCATGATTTCCCGCC
CCAAATATTAACAATCTGTTCGTCGTTAGCTTATGTAAAGCCTCCAATACGGACATCTGA
TCGGCTATAGAATCAGTAGAACGCGACAGTAAGAAAAGTATTGTTCTGTTCAAACAATGA
TGGAGCCCTTCCAGTGATACAAGAGAAGATTTCTTTTTTGCTTGCGTTACCAGTTTCACA
ATAAAATCGAATACCTCGTGAGGGTCCCTCGACAATTGTCCCTGCCATAACTTATCGACG
AGCCGGGCGGCCAAATAGCAAACATTCGATATGTTAGATTCTGAACTAAACAGTTCGGTA
TTCAACAAGTTTTCCATCAGAGTAGTCAACACTTCAGTCTGATATTCAATTTGTTGCTGA
CTTGTAGAATTCGGTGGAGACGCATCTAAGACAAGGTCAATAACCGGCGCCGTCTTCCCC
GTGACGTTGAGCGACAGAGAGTCCAATACTATGACCCGCAGGAAGTCCATGACGCTCTGT
CGCACCGCGTGCTGTGTGAGCGCGGCCGACGCGCCCGCTATCACTACCTCCTTCTCCGAG
CCGGGGGTCGATGCGCCCGAACTTTCCCCGCTCTCGCATATCGGCATATGAATGTCATCG
GATGAGTTAAGAGGGAACAGCGTTGAAGCCAATGCAGTAAGGACTTCAGCTGACATCATT
ATAGGCACGAAGTCTGGCAATGTGTTATAGAGGGAAAACAACACCTGCAGGATGGGCACT
GGATGGTCGACGAGCCAGTCGGGCAGAGCGGGCTGGTCGGCGTGCACGAGCGCGCGCACC
GCCCCCAGCAGGATGACGATGGCCTCGGGGCACAGCGTGATGCGGGCGGCCAGCGCGGCC
GACGACTGCCGGGCGGGCGCCACCGCGCCCCACGCCGCCGCCCACACGCGCTCCACCGAC
ACCGCGCGCTCCGAG
(7215 bp)

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