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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29473_c0_g2_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		hypothetical_protein_KGM_22003_[Danaus_plexippus]
Ontology
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
Transcript
Level		FPKM:20.17 TPM:26.87
ORF EntryO_BomoN4EE11364_complete:A_BomoN4EE_TR29473_c0_g2_i1
Sequence
(Nucleotide)
TTTATCTATACTGTGACGCTGCGCCAGATATTTTGTTTCTTCAAACATCTTTTAACTATT
TGTGTTCGTCTCAATTTATCTGTCTTCTTACATATAAAACAATACGAATAATCAATATCT
TCACGAATTTTTATATGAATCAGTGTATGAGTTGAGATTGTAAATGTTACCTTGTGGTTA
AATTAACAAAAAATGGCTCAGCGTTTCCCAGTAAGTGGTCCAGGTGGATCTCCCGGTGGT
ACTCCAGGAAATTTACCGCCCCAACAAAGATACGCAGGGCCGCAGCCGCCGTCTGCCTCG
CCGCTACCACCCCGACCCTACCCAGGACCTAACTTTCCAGCACGCAGCGGATTCGGCGGC
GGCGGCGTAGTGGCAGGAGGGGGCGCGCGAGCGGCGGGGGGTGCGGCCTATGGCGGCGGC
CCCCGCCCCGCGCCGCCCTCGCCCTCCCCCGCCCACAAGCCGGCCGCCAGACCAGCGCCC
GATATCGAAGGCGAGTGCAACGTGAAGTGGGTCCGGCGCGTGGTGCTGCGCGGCAAGCTC
ACCATGCACACGGCGTACGAGCGCCGCGACAACGTGAGCCCCGCCGCCGTCACCGCCGCC
GCCGCGCCGCGCTCCGGCCGCGGGCTCGCCGTGGGGGACGCGCGCGGACGGATATTCCGT
TGGTCTGCGCCGGACATGTCTTCAGCTTCGGGAGCAAAAGGGGGACCTGCTGATCATTGG
GTTAGAGACGACACTGCTCCTTATTGCACGCAATGTCAAGTACGTTTCACGGCGCTGGAG
CGGCGGCACCACTGTCGCGAGTGCGGCGCCGTGTTCTGCGGGCGGTGCTCGCGGTACGAG
GCGCCCGTGCGCCGCCTGCGCGCGCTGCGACCCGTGCGCGTCTGCCAGCGGTGCCACGAC
AACATACACGGGAAGAAGGAATAACATCACGACACCCGCCTGTCCTACTCCTTCGGTTCG
TTCGCTAGAAACGCTTACGTCGAGAGGATTTTGCATAGGCTTTCCGCATCCGATGATAAT
TGACTGTTCGAGTGGTGACCGTCTCGGTGTTAACATGTAAATCGAGTTTCTAGAATGACG
TAAAATAACAATGGCGATCCGTACACGAAGGAACCAATCACGATCTGGTTCGGTACATAG
TTCAAGATCCGCTAATTCAACTAATATTCAATGAATTTGGCAGCGTACGTATCTGAATTG
CTAATGTATGGTAACTACATAATATAATTAAAAACTAATTCCGTCAGTCTAGTGTAACGG
TTTAGATGACGGGCCTAATGCGTAAAAAAGATTATTGTTAAAGCTTCCTGCGTTTTCTAT
CTAACATGAATATCTGAAATTATAAAAAAAATAATGAAGCAATGTATACATACATCCTTC
ATTGTTCGTTCAATGTAGAAAATGATTAATCGTGTCTAGTCAATGTTGAAAAATGAGTAC
GAGTAATTGTCGTCCTCCTTTCACTTTTCTCGTTCATTTAATTTTTTATATTATGTATCG
CACACCACACGCCAAAATCTATAAAAAGCATAAATATATATAAAAAGATTAATTTTAATC
GACTATTGTTTTAGTCCGTTTACAATTCGTAATTTTGCTAACTTTGGTATGGTGGCATGG
ATAATTTTAAATAACAATGGAAATCAATAATTGAAACCACAATTGCACAGGCTGCATAAT
TATGAACAGTTTTTTTACTAGTCCGTCAAATTGCTCATTTTGAACCCAAAACTTGCCTTT
ATATTAGTAACGTGGGTTTTTATCGATATTAAAGGAAAATTGGCAATAAATTTGTTTCTC
AAAGGTGTGATTCTCAGCTAATTAGATTCTCGTTTATTCTGCCCCTTTTAAAACCGATTG
ATATTATAATTTATAACAATCGAACCAAAATAAGAGTCGTACATATTTGTATGAAATATT
GTCTTAGGCGCGCTTTAGATGTATTGTAATGAAGGTATATTTAATATAATTGTGTTATAG
TAAGTCAGTATTATAATGTTTAAGAGAATCAAATACAAATTATATTATTATATTTGTTTA
ATACTATCACGATCTCAGTGAATTTTTATAAAATGTTATTAAATTGTATTATTTTTGAAG
AATAAATAAAATTGTGATATAATTTTAGTTCAAACGTATTTCTATACCATGAATTATTTT
CCTATTAAGTTCGATGAGTGAATTTAATTATGATTGATTGCTAGTCCTACTTTATATTAA
GAAATTGTAATGCAAAAAAAAACCTATGCAACTTTTATTGTTCTGTGAATACAGGCCTTT
TCGGTTCATTAGATCCTATCAATTCAAAACACCCTATTTGCATTTAGAATCAACATTCCC
TGAAAGCTATTTTTTACATTTTGCTGTAATGTCGTTATATTGGTTTTTTACTCCATATAC
ATTTCACTCCCATTTTACGTTAAACATATAATATTTATTATACCCCTTGATGTGCGGCTT
TTTGTTGTTTCTGTAGTAAATTAATCAATAAAAAATAATCGATTATAAAATGTTTCAAAG
ATTAAAGTCGTAATTTTTTAATACATTCTAAAGAAACTTTTATGCAAAATTTTCTATATT
TGTAAACATCGCATAGGAACTTGAATATATATTGATGTAACAAAGTAGAATTTAGAAAGT
TGCTTATAATTATTGTTTAATGTGGATATAAATAAGGAAAAGTGGATTATAAAATTATAT
AATACGTAAGTCGAATGTTTCTTAGTCACCCAGCATTAGTGTATAGATGAATTATTTACA
GACAATATAATGTTGTTTAGGTAGTTTGTAGGCACTGAAATTTTATGCCGTTGACTAATG
TATTCTTGATATGTACCTATAACAATAAATATATTGGTGCAGATAAAAAAA
(2871 bp)

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