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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29306_c1_g1_i5
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_BRCA1-associated_protein_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007265 P Ras protein signal transduction
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0009968 P negative regulation of signal transduction
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031965 C nuclear membrane
GO:0042802 F identical protein binding
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.51 TPM:2.02
ORF EntryO_BomoN4EE11273_complete:A_BomoN4EE_TR29306_c1_g1_i5
Sequence
(Nucleotide)
ATACTAATGTTCAAGATTACAAAGGAAGGTGTTGGAGCTCGCGGCGGGGCGGGGCGGGGC
GCGACGCGGCGGGGCGCGACGACGGCTGCGTGGCCCTACCGGCGGCGGCGGCGCGGCGCG
GCGTGGCGGGGCGGCACGGTCAGCGTGGCGGCGGCCAGCTCGTCGCGCGACACGGCGTCG
GACCGCTCCAGCTGCGCTCGCGCCTCCACAAAGAACATCACGTCGCGGAGTTGCTCCTTC
AGATCGCTGACCTCTTTGGTGAAATTCTCCTCCTTTTCTTTAGCCCTGGCCTGCCACTCC
GACTGGCTGCTGGCCATGGCCGCCGCCAAGCCCCTCTCTTCCGTCAACTCGTTTTGGAGA
ACCGATAATCTGAAAATTCATTTACGATATCACATGGAAACGTACTAGAGTTGTGCGAGT
GTCCACTGGAGTCGAATGCGGAACTGTTAATTTATACAAAGTTGTAAGTAATTCGTAGCG
TTTGCAGTAGAATATTTATGTTGAAACAGCTGTAAATAAGTGTCATGTTCATAAAATATT
TTGTTTTAAAGTGTAAGTAACAATAGGTACCGGAGTTAATGAACGTGTCAACATTCATGC
CGAACTATGTTATTGGCCTTCAAACCGTTATTTTCTTTTTTAGAGACAATTTTTTAAAAT
TTGTATATTTCAATTCTAATGATTTATAAATAACTAGAGAACCACATATATTTAATATTC
CTTTCAATGAGTTTAAAATGTGACTGTGTAGACCCTAACTCGGGTGCGGAGGCTGCTCTG
GTGTGTAGTGTGCTACAGTACGGAGACTGGTTACTTGTTGGTGAGCTGCTGCAGTTTCCG
GTCGAGTTGTTTGTTGCGGGCCGTGAGGTCGTCGACCTGCGCGGCGAGGTCAGCGGCCCG
GGCCTCGGCGGCGCGCGCCCGCCCCTGCAGCGCCGCCCGCTCCGCCTCCCGCTCCCCCTC
CAGCTTGGCGATTTTCTCCTCGTAGTGAGTGCGCTGCGTGTCCAGTTGCTCGGTGAGTAT
GTAGGTGAACTCGTGGTCGTGCTTGCCCCCGCAGGCGCCCTCGGACGCCACCAGCTTGCC
GTCAGACTTGTTCTGCACCAGTCGGTGTACGAAGTTGTCTCCTGCGTAGTCCCAGACCCT
GTTGGAGCCGAGCTGCAGCGCGTACGTGTGGTTGGACTGCAGGAAGTGCTTCGCGGCGTG
GCCCCCTTCGTACCTCCCACATCCCACGTGTCCACAGATGAGGCATATCCAGAGCGTGCC
CTCCTCCAGCCCGTCCACGAGCCCCTCGGCGACTCCGCTGAGGTTCTCGCGGGTGTCGTC
GCCTTCCTCGTCTCGGTGGGGCGCGTCGCAGAGCTGGCAGCGTGCGCTCGCCCTCGGCTC
GGGGGTCTGCGCGCAGCGGCACACGGGGCAGCGCAGGTCGCGACTGCGCGCCAGACACTC
CGCGTGGAAGGCGTGCGCGCACTGCACGCTCAGCACGCCCGCCACGCTCTCGTCCATGCG
CTCCAAACAAACAGGACAAGTAGGGAGCTCAGTGTGTGATGGTGGTGGGGAACCATCCTT
TGCCCATTCAACCCTTGACACCCAGGCTGTATGACACAGTGCATTTGGTTCCAAACTACT
ATATGGAACCCCATCAAAAGCCCCATGGAATTCTCGAGCTGCTTGACTAGTGCGAAATGT
TAATAGTGCCATGTAATGATCAGGTGAACCATCTCTGAGAACCCTCACATGTGCAATATC
CTGTTGACAAGCTGCAGCAAATGCAAGCAGGTCGGGTGCACCTAAAGCACCAGGAACTGC
GAGTAGGCAAAGTGTCTTGGCTTCTTCTGCTTCTTTCATTTCATTTTCCTTGTACAAGTG
TAATATGCCCTTAGTAATTTCAACTAGTGGATTTCCACAGAAAAAACTAATAGTGTTATC
GTCTTCAGATATACTGCTGGACTCTGGAGGTGAGCGGCGGGAACTTGTAGGTAGTATGCC
TGGGTCAGTGTTGGGTCCACTAAGAACACTAGCATATGTTTCAACTGTTATGGTTTTGGA
TTCCCTTGCTCCTCGGTCCTTTCTTTTCTGGTCCTTAGAGGCCTCATTGTTAACACCGTC
TGCCATTTCGGACAGTTCTTCGTCTATTTCAATACGTAGTACACACAAAGAGACGGCCAT
TTAAAAAGTTATTTATAATCGCAAATCTTCGTAAACTCTTGGAGCACAACTAAGAATGAA
ACTCAACTCAAAAATACTATTTGTCCATTAAGAAAACTTTGTTTTTTAAAAAATTCGTTC
AAACGAATTTCATATAAAGGGTATTCAAATTAGAAAAACTTCCAATTATAACTAGTTACA
CGTAATAACTTGTAAATTCAATGGAATCGAAACTGTTTTGCGGATTGTGAACGTTTGTCG
TTGTTGTGAAACTGAAATAAATGTGTTTGTGTTGAGTGTTGACCATAGATA
(2451 bp)

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