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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29305_c0_g2_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_sphingomyelin_phosphodiesterase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.61 TPM:0.82
ORF EntryO_BomoN4EE11242_complete:A_BomoN4EE_TR29305_c0_g2_i1
Sequence
(Nucleotide)
TTAATTTTAATTTTATAGGGACATCTAAAATTAATATTTACATATAGTATATACAAACTA
CATTGGTACTTTTAAATTGATCCACCGATGTTATGACTAAGGCGCTGAATTATATAAATT
ATATGTAAAAATCTCAAAAAACATATTGTTTTATTACTATACATAACAAATACTTAGTGA
CATTTGAATAAGGCACTTTATTATATTAAAAGTGAATTTGTTTTTAAATCAGAATATAAT
GTGTCATGAGATAACCGGTGGTATAATTCATCATTTCCAAAGCTGAAAGATTTTGCATTC
AGCCGAGTCCCAGCACGAACTTTGGTATTTGATAGGCAACTTGAGGTAATTGCATTATCA
TAGACATCCTTAAAATAAGACCTGGAATCAATAAGCAAATCCACCACCATTATACTTGTT
GTACGCTAGGTTCATCTCTGTACATAAAGAAATATATTACAAAAGGTTGAAGTAAGAAGA
TACTTGGCACAAGAGATTCCAAGAAGTGTCAATTGAGTGTGCCCGACACTGTATTCCAAG
TTCCTCAAGAATAAGGACCGGATACTTTAGCATTTAAAATTTATTGATATAGATTAGGTG
ATCTTGTTGCATTGTAGGGGAGCCCAATAAACTAGAATTAATATTTAAGCACTCTGTAGC
AGGCTGTGCATGTTAGAATTATCTATCATTTATTAATTTTATGAGGGAACTTTGTGCATT
CCATCGATTTGTTAACGTCAATTGTTAGCTACAAGCCCCATCTTTGAGAAGATATTCAAA
CGAAACGCATAGCTTTATGGAAAGATTTTCCACTTTCTTGTCCGTTCTTGCCCTGTCGAT
TATTTTTTTTCATATAAAATCTTCGCCTTTCATCTCATATTTAAGGCGCAATCAACTTCA
ACGTCTGAGATTTATTAATATCCCACCCGCCTGAGTTCCAGGCGCCTACGCCAGATAAAG
GAAATAGTATAGCAGTGCATTAAATAGAACAAGCAAGATCTTTTGAAGTAAGCCCATTAA
TTCATCAGTTTTGTACACAAATAGGTAGGTACTATTGTCGAGTTAGTGTGTGAAAAAAAT
GTATTAAAATATTATAGTACATTAAAGTAGTTATTCAAAGAGGAGAGTAAACTTTATTAA
AGTCGTAAAAGCTAGATCGGAACTCACGAAACAGACAAGCCATTATATAGCCAAGCTCTC
CAAGTCTGTGGAGTGGGTGCGGCGCCGTCGATGCGTGCTTCGATGTGCACGCAGAGGGCC
CTTCGGTCGTGTGATCGTCCCGACCGCGCGTCGCAAATCAATCGCTTACGACATTCACTG
TCGCACATACCTCTGCGGGGACTGTTCTTCCAATAGTGTTTGTAATACAAATTGAAAACT
TCTTCTTTCGCGGTCATGTCGTCAATAAACTTGTCCCAGTCTTGCGGTCGCAACGCCGGC
ATCAGGTACGCAGACCTGGCCGAGTACAACTTATACCATATCGGATATCCAAACAGATTT
GCTTCTTTCAAATTCATAATCCACGTTTCGTGGTCAACCACTTGCCTAGTAGTATCCTCG
TGGTCACCGTCTACATAGTAGATTCTGTATCCCAAATTTAAATCGTAATATGGTGATACA
GAAGGCCCAACGTATGCTATACTTGTTGCTCTACCGAGGTCATTTGGATCATAGAATACT
TCAAACTCATCAAAATGTGTGTGTCCGAAAAATTGAGCCGTTATCGTTAATTCGTATCGG
TTAATGATCGCGTAGTAATTTCGACTCCACACTTTCAAACAATCGGAATGTCCGGGGGGT
ATGTGACCTATGATGTGGACTTTTTCTGCGCTGAACTCTGCCGACTGCAATTCGTAAATC
AGCCACTGCAGCTCCGTGGCGGGGTCTGTGCTGTTCATCAATAGCCACCAGTTTTTATTA
TTGCAGTAGTTCATATTAAGCGATATTATACGGAAGCCAGGCCTCACTAGTACCGAGTAG
AATGCGCCCCGGCGTACGGTGTGCGACACGCCAGCAGGAAGCCAACGTCGCCATTGCGTG
TCAAGTTCGTCATATAGCCAAGCGATGTTTTGGTCCGGCGAAGATATGTAGGGCGGTGGA
AAACTATTTACCGGAGAAGACTCGTGATTTCCTAGAGCTGGGAAAATTGGTACTCCAGGA
AACATATCAGACATTTGGGCAACAGTCTCTTGTAAAACCTTGAGATTTTCTTCCTTCGTT
TGATTCCAAACGTCATGTGGTGGTAAATCTCCGGTCCACAATATATAGTCTATGTCTGTA
TGTGTGTCAGCGATGTGCTTCAACATGTGATCAATAGTGCGCTTCGGTGTGTCACATTTT
CTATAGTCTCCCCAACGTCCTGCTCCGCCACCCGGGGTCAGTGCGGGTCCGTTAGACGCA
CGACAACAAAGTGGTTCATTACACTCGGCATTAGCACCTTCTGCATAATAAGGATCGAAG
TGCGTATCTGAAATCTGCAATACTTTGAATGTGGGCGCCTTTTCTAACGGTGATTCGAGA
GGTCGTACAGTCGGCTTGGGCACCGGAGGGAAAGCCACTTCCCATTCGTGATATGGATTA
TAAACATCGCCACAAGCGTCACCAATCACAAAACTGCATATTTCGTCCGGGCCAATTGTT
ATTCTTTTCAAAACATATACCACTTCGCTCCCGAATAATCTCGTTATTCCTTCACAAACT
CGAGCGGATTGAATCTTTAAAGAAACGCAAAATTGAAAAATCATTTTGTTGATCTCATCT
TTACTTTTACCGAGCCTTATATAGTGCTGCAGCAGTCCTGCGCCTGCCTTACATGCGGTA
CACGACACTTTGGACATCACCGAATGCTCGACTTCGTAATAAACCTGTTTCAAGTTGAGT
AGTTTTAACGCTTTTTCAACGAACATAGGTAAATTCGTGCCTTTATCGTTATCCCAGAGG
AGCCGCGAATAGTTACGTTTCAAAGCTGCCATGTGAGCTATGAGTTCGGTTTCATTGGCC
GATGGTGGCAATTTATGCGTAAAATTTGACGGTACAAAAAACGGTTCCTCGTTTCGGGGA
TTCGTAGTCCAGTTCCACGTGTCCGTTGGAGGATTCCATTTTATCACAGGTCTGTTTGGC
TTACCAGGCTTCTGTAGGAATATTGGGTTACCTAATGTCCAGGGGCTTACTGAAACAATC
ACTAGTAGTAGAAGCCATAATATTCTAATAATCATAACGAGATGAAGAACGCAGACACTT
ATTAAATAAAATCCGAAGCGGTCAGTTCCTCATGAAGAGTATCCAGGAGCTAGGCCGATG
CGGTATGGTCAGTGAACGAATAACATTTCACTCGTTGCGTGTTGAACTATGAAAAACGTC
GCATTCACATGCTACTTATTTTACGAAAGGAAACTCGATGAGCGATATAACGCGTTAACA
GATCGCTATTTGACAGAGCACTGAGCGTGTATCCAAGCCGTAGTGGGAACGTACGAACAA
AGCAGGGAGGTGGGCGTGTGACGACAACCGCATGCGGCGCGCGCAGTGAGAGTTGTGTCT
CCATCCGGTTGCACATCACAACGGATGGCGACGCGAAGGCCTCGG
(3585 bp)

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