SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29294_c0_g1_i6
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_geranylgeranyl_pyrophosphate_synthase_[Papilio_polytes]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.09 TPM:9.44
ORF EntryO_BomoN4EE11215_complete:A_BomoN4EE_TR29294_c0_g1_i6
Sequence
(Nucleotide)
GAAAAAAATAAAAAAATGCAAAACTAATAATTTTGTGTAAACTACACCTCGTATGCACAT
AAATATGTATACATAGACCTACTGCTGTGCATTTACTGTCAGCTCATTTGGAATAGTGCA
TTGCGTTTGCTCAATTTCATCCATAACATTGTACGCTTCATATTCGTTTAATATAATTCA
TGAAATTGGGCTGTAAAGTGTGAAATCATCGCCTATCCAGTTGGAAAATTGGAACTACTG
ACTGACACTTGACAGTTTTTCACGGCGAGGTAAATATCTTGAAGCGGAAAATCAATACAC
TGAATATCATTTTTTAGTGTTATATATTTTCATCAATAGATCTACAACAATGTCGCAAGC
TATCACAAGAAGTGGTGATAAAAATCAAGATGAGAAAATTCTCATGCCTTACACATACAT
TCAGCAAGTACCAGGGAAACAGATAAGAACGAAGCTAGCTTCCGCATTCAACTACTGGCT
CAAGATATCTGAAGAGAAACTGAGACTAGTCGGTGATATTGTACAAATGCTACACAATGC
CAGTTTATTGATCGACGACATTCAAGACAACAGCATCTTACGGCGCGGAATACCGGTAGC
CCACTCCATCTATGGTGTCGCGAGCACCATCAACGCTGCGAACTATGCTATGATCATAGC
CCTCGAGAAGACTTTGGAGCTTGGCCATCCATTGGCAACGACTGTATACACCGAACAGCT
GTTGGAATTGCATCGAGGTCAGGGCATGGAGATTTACTGGCGGGACAACTTCCAGTGTCC
CTCTGAAGACGAATACAAACAGATGACCATCAAAAAAACCGGTGGACTGTTCATGCTAGC
GATACGACTGATGCAGTTGTTTAGCGAGAACAAATCGGACTTCACCAATCTGTCCGCCGT
GTTGGGGCTGTATTTCCAGATCCGCGACGATTACTGCAACCTGTCGATGAGGGAGTACAC
AGAGAATAAGAGTTACTGCGAGGACCTCACGGAGGGGAAGTTCAGCTTCCCCATCATACA
CGCCATCAGGAGTCAGGAGGACGACAAACAAGTCCTTCATATCCTCCGCCAAAGGACACG
GGACGTTGAAGTGAAACGTTACTGCATCACGTTGTTGGAGAAGTTGGGCAGCTTCCGGTA
CACGAGGGGGATCCTGAACGATCTGGACGCGCGCGCCAGGGAGGAGGTGTCCCGTCTAGG
CGGCAACCCACAGCTGGAGGCGCTGCTGGACGACCTGCTCACCTGGAGACAGGAAGGCGA
CGACGCTAACGATCAAATGAACTACGTTTGAGCGCAACTAAAGATGAGCTTAATTTATTA
TAAATATAAATTATTCCAAATACAAATAGTGAGGGTAGTTGAATTTGTTCCTTAAATTTT
AGCGAAACTTTTGCTAGTGTTATAAAACAGAAATATATATCGAGAAGTGAAGGGTTATTT
GGTATAAGGGACATCTTTGAAAAATTACTGGTGGTAGGACCTCTGGTGAGTCCGCGCGGG
TAGGTACCACCACCCTGCCTATTTCTGCCGT
(1531 bp)

- SilkBase 1999-2023 -