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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29294_c0_g1_i5
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_geranylgeranyl_pyrophosphate_synthase_[Plutella_xylostella]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.56 TPM:0.75
ORF EntryO_BomoN4EE11214_complete:A_BomoN4EE_TR29294_c0_g1_i5
Sequence
(Nucleotide)
CCAGCTGTTCTAACTATACTTGAGACCTTACAACTCATGTCTCAAGATGCGCGACGCCAT
ATACGTTGTTGATGTCGCTTGATGTACTGTGAGATCGTCCATCCATCGCAGTTAAAAAAA
AAAGAAGAAAAAAAACGCCAACTTCTTTCAAATTTCGTTTATATAGAGATGGGAGTTGAT
TCCAGAATCGCAAGGGTCAGAATAGACTCGCCACTCATATAGGAATGAACCGTGCGTTGA
ATGTAGTTGTGTGACAGATTTAATGATCCAAAGCTTTCGGCTTATAGAAAGCTGGTTCCA
AGCAATACTTAATATATTTCAGTACACAGAGAATAAGAGTTACTGCGAGGACCTCACGGA
GGGGAAGTTCAGCTTCCCCATCATACACGCCATCAGGAGTCAGGAGGACGACAAACAAGT
CCTTCATATCCTCCGCCAAAGGACACGGGACGTTGAAGTGAAACGTTACTGCATCACGTT
GTTGGAGAAGTTGGGCAGCTTCCGGTACACGAGGGGGATCCTGAACGATCTGGACGCGCG
CGCCAGGGAGGAGGTGTCCCGTCTAGGCGGCAACCCACAGCTGGAGGCGCTGCTGGACGA
CCTGCTCACCTGGAGACAGGAAGGCGACGACGCTAACGATCAAATGAACTACGTTTGAGC
GCAACTAAAGATGAGCTTAATTTATTATAAATATAAATTATTCCAAATACAAATAGTGAG
GGTAGTTGAATTTGTTCCTTAAATTTTAGCGAAACTTTTGCTAGTGTTATAAAACAGAAA
TATATATCGAGAAGTGAAGGGTTATTTGGTATAAGGGACATCTTTGAAAAATTACTGGTG
GTAGGACCTCTGGTGAGTCCGCGCGGGTAGGTACCACCACCCTGCCTATTTCTGCCGT
(898 bp)

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