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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29294_c0_g1_i3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		geranylgeranyl_diphosphate_synthase_[Choristoneura_fumiferana]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.46 TPM:0.61
ORF EntryO_BomoN4EE11212_complete:A_BomoN4EE_TR29294_c0_g1_i3
Sequence
(Nucleotide)
GAAAAAAATAAAAAAATGCAAAACTAATAATTTTGTGTAAACTACACCTCGTATGCACAT
AAATATGTATACATAGACCTACTGCTGTGCATTTACTGTCAGCTCATTTGGAATAGTGCA
TTGCGTTTGCTCAATTTCATCCATAACATTGTACGCTTCATATTCGTTTAATATAATTCA
TGAAATTGGGCTGTAAAGTGTGAAATCATCGCCTATCCAGTTGGAAAATTGGAACTACTG
ACTGACACTTGACAGTTTTTCACGGCGAGAAAATTCTCATGCCTTACACATACATTCAGC
AAGTACCAGGGAAACAGATAAGAACGAAGCTAGCTTCCGCATTCAACTACTGGCTCAAGA
TATCTGAAGAGAAACTGAGACTAGTCGGTGATATTGTACAAATGCTACACAATGCCAGTT
TATTGATCGACGACATTCAAGACAACAGCATCTTACGGCGCGGAATACCGGTAGCCCACT
CCATCTATGGTGTCGCGAGCACCATCAACGCTGCGAACTATGCTATGATCATAGCCCTCG
AGAAGACTTTGGAGCTTGGCCATCCATTGGCAACGACTGTATACACCGAACAGCTGTTGG
AATTGCATCGAGGTCAGGGCATGGAGATTTACTGGCGGGACAACTTCCAGTGTCCCTCTG
AAGACGAATACAAACAGATGACCATCAAAAAAACCGGTGGACTGTTCATGCTAGCGATAC
GACTGATGCAGTTGTTTAGCGAGAACAAATCGGACTTCACCAATCTGTCCGCCGTGTTGG
GGCTGTATTTCCAGATCCGCGACGATTACTGCAACCTGTCGATGAGGGAGTACACAGAGA
ATAAGAGTTACTGCGAGGACCTCACGGAGGGGAAGTTCAGCTTCCCCATCATACACGCCA
TCAGGAGTCAGGAGGACGACAAACAAGTCCTTCATATCCTCCGCCAAAGGACACGGGACG
TTGAAGTGAAACGTTACTGCATCACGTTGTTGGAGAAGTTGGGCAGCTTCCGGTACACGA
GGGGGATCCTGAACGATCTGGACGCGCGCGCCAGGGAGGAGGTGTCCCGTCTAGGCGGCA
ACCCACAGCTGGAGGCGCTGCTGGACGACCTGCTCACCTGGAGACAGGAAGGCGACGACG
CTAACGATCAAATGAACTACGTTTGAGCGCAACTAAAGATGAGCTTAATTTATTATAAAT
ATAAATTATTCCAAATACAAATAGTGAGGGTAGTTGAATTTGTTCCTTAAATTTTAGCGA
AACTTTTGCTAGTGTTATAAAACAGAAATATATATCGAGAAGTGAAGGGTTATTTGGTAT
AAGGGACATCTTTGAAAAATTACTGGTGGTAGGACCTCTGGTGAGTCCGCGCGGGTAGGT
ACCACCACCCTGCCTATTTCTGCCGT
(1406 bp)

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