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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29280_c0_g1_i3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_thrombospondin_type-1_domain-containing_protein_4-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001527 C microfibril
GO:0004222 F metalloendopeptidase activity
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0031012 C extracellular matrix
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.28 TPM:0.37
ORF EntryO_BomoN4EE11151_complete:A_BomoN4EE_TR29280_c0_g1_i3
Sequence
(Nucleotide)
GAATATAATCACATTTATATAAGATATCAGGATTTCGAAAATAATACACATACTAATACT
AAATTTATTTTATTAAAATAACGAATAAAAATCACGGTCGAGTCAATTTATATTTTCAAT
TAAATTTTCTACACTACAAAATATTTATGAAACATATTCAATCGCGTTATATTCTAAAAA
TGATTATGAAACTACTGATGAACGACGAATACCTTATTATGACAGGTAATGCTATGAAGT
GCAGGAACAGTACGATGCTGCCCGCTTTTATTGTGAAATTCATTCATAAAGTTGCAATAC
CGTTCATTTACTTCATCGTAGAATGAACAGTACTTTCACAGTCCTTTGCAGGAATTACAG
CAGTTCTGCACGTAGAAGTTATAATGACAAAGGCGAGCTTGAACCGCCAGGAAACAGTTG
TTCAGTTTATCTTCGCATTCTCTAGGTCCGGTTTCTCTAATAATGGGAGGCCGATTACTC
GAAGTAACGACTTTTTGAGATTCGATAGTCAAATCTGGCGGTAGAGTAGAAATGGTAGGA
CAGCGCATTTCGCAAGATTTCTGCTCATGAGGTCTCACAGTCTTGCAATCAGCTTCACCG
CCCGTGCCGTTGGTTTCAGGGTGAGCACAGATTACTGATCGCGTTTGTAAACCTACTTCA
GATGTACAGTTTCCTGTGCACTTGCCCCAATCGCTGAAGTACCAAGTGGGAGGGCAGTCG
GCGCCGCATTCCCTTACGTGATCAGGCTTAGGGTCCTTGCATGCCGAATCACGAAGATGC
CTACCGGTGCCACCGATGCACAGAACTCCGCGAATCTGTCTTCCTTTGCACTTTGAAGTG
CAACGCGACCAGTCACCAGTAAACCATTGCCCCTCCGAAGACTCGCATGACAGGGCAGGC
GAGCAGCTTCTGCTTGTTTGAGGTTCCTTTCTTGGAGCACATCCTGAAGGATCAGTACAA
CGCACACCTCTTGTTTGCACGCCACCACCTACACACCACCCGATACACTCCGACCATTCG
GTGTAAAGCCAGCCAGCTGCCGCATTAAAACTATATTCTGGGCCGATTTCGGATTCAGTA
GTATTGATGGATACGGTATAGACGGGGCCTTCGCGGAATGCGTCGGTTATTTCCTTGCTT
CGAGTTCTTTTTGATTCAATACGTCTAACCGGGCCCAAACTTAGGTCATCGCAGCTTGGG
ATGTTACACATTTCTGTTGTGGGTGGCTTTGGAGGTGGACATTTGTGGTCACTTATCTTG
GTAATTCCTTTAGAATGATCCTGTACACATCCTACTATCCTTGTCCGAGTGGCAGGTCCA
CATCGGGGACAAGGAGACCAGGAGGCTGCCCTCCATCTTGGTGGACAGGGCACATTACCA
CATCGTCGTCTCCGACCGACTGGAGGTGAACCAGTACAATGGACCGATGATACCTCTCGA
TCTCCAGTGTTTGTTGATTCTACACACTTATACTTTCCTAACTGAATTCCGCCACCACAG
CTTCTTGTGCATTGGGTGAATGACAAAATTCTCCACATGAATTTTCTGTTGCCAATTACA
TTTGCCTCGATGCCAGTTTCAACACTCGTCTGTTCATTGGAAGTGCTCGGATGATCTAAA
TGTCTAGGTATATTCCCTGTTGCCCTGGGATAAGCATCAAAACTGTGATGTCTCCTTGTA
TGTTTAGTAACAATAGCTGGTACGATATCTGGTATTTCTGGCCTAGCTTCATCACCTTCA
TCAATCGGAGAATCCGTAAAGTATTCATATTTAATGTTCGGCTTTGGTTGAGTATAAAGA
ATCATAATATCAATAGGATGATATATGGGGCCATTTGCATGCACATTGTCCAGTCCAGCG
GTACGGGTATAAAGAAATCTGGCTCCAGCCGCCTCATACATTCCTGGAGCACTCACGGCA
AACTCTCCATTTAATATATACGAGCTATTCGACAGCCTCAGGGCGATATAATTTTCGCTT
GAAGCTAATTCTGTCACATTAATCCGGCATGCTCCCCTTGGGACGGTCGCTACAAAAGTG
TAGCCCAGTGGCAGTCGAGGTTTCGAGAACAATCCTGAAACGAGCCTTCTTCCACATCTC
AGCTCCCGAGAATTGCTGCCTGCTAATACAGACTCCCGTCCGATTACCTTACAGGTGCCC
TGCACACAAATAGCAGGGAGTCCGTCTTGAGTACAAGGGGTGCCGTCGTCAACTATGGAC
AGAGTTGCGTAGAATTGTTGACCCATAGGCCTACAATTCAAAGCACATGGCGCATTACCG
TCAACATATGGAATCCATGTGTAAAACCTTCCTCTAAACGGTCTTCTATCAAAGGAACTA
CATTGTTCTGCGCGTGTATTTAGAACGCCTCCTGCACAAGGCTGTGTGTTGCACTCGTGG
TATCTTCTGTCGACCCCAAGGCATCCTTTGTTGATTTGTCTTGTAACTCGAACTGTTAGG
ACAGGTGTCGTTTCGTTACTGTTCACTTGAAGATTACGAGATCTTGGCAGGCACTGTCGC
TCTTGTACTGACACACCACCGCCGCAGGTCCTAGAGCAAGGACTCCATCGACCCCAAACG
CTCCACGCGTAACCTGAACTTGGAGGTTCCGCTGTTGTCATCTGTGTCGGTGCCATAGTT
GTTGTGTTATTTGTTGTTGAATCTGTCATCACGATTTGCAATAGAGCAGCTATCCAAAAC
AAATCCCACAGAAACTGCCCGTTCTCCATTTTAATACACTATAAACTTTTACTGACATTA
AATTTGAACTTGTCTCTAATCATTTTAATATACGTTAAATAAAAATGTTTATAGTTTCTG
AAACGTCGTGTTTTAAAAATATGCCACTTTTTATGTCCATAGTTTATGGCGTCACGTTAC
ACCTTGGCTGATAATTTTCACCATATCGTTGAGAACGATAATTTTTCATGTTTCCTTAAT
TAACGTGTGCCTTAAATAAAAACATTAAAACAGCACTTCGAAATTTAAAAAAGGTTTATA
ACTAAATGAATTAATATACTGTTTTTTTTTCCACTAAAACTCGGAATGCACGAACACGTG
ACAACGCTTACTCATAAAG
(3079 bp)

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