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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29270_c0_g1_i3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_cyclic_nucleotide-gated_cation_channel_beta-3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0005216 F ion channel activity
GO:0005221 F intracellular cyclic nucleotide activated cation channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005223 F intracellular cGMP-activated cation channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0007601 P visual perception
GO:0009187 P cyclic nucleotide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030553 F cGMP binding
GO:0042391 P regulation of membrane potential
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902495 C transmembrane transporter complex
Transcript
Level		FPKM:1.85 TPM:2.47
ORF EntryO_BomoN4EE11120_complete:A_BomoN4EE_TR29270_c0_g1_i3
Sequence
(Nucleotide)
TACTAATAAAACTGACGAGTGTCGCTGCAAAGGTTTCGGATTTCGTTTTTCTTTACATTA
CTAGAAAACTACACATATTAATAATGGTGATTTATTAAAATTTGTTGAGTGCTCTATATC
GTGCAGGTAGCTTTCAGAATACAACGAAAATGGTTTTTGACGGGCTAAAGCTTATGAAAG
GGCACACAGTTCATCCTTCAACATCAGACCGTGATGTTAAATATGGAACTAAGACCCCAT
TGGCCCGTGGGCCGTATGGTTCTTGGTGTACGCCAGAGACCTCGCCCATTCATCACCCGT
TGACGCAAACAAACTCGAACATCGAAACGAAAACTCAGCTTCAAGATCAGAAACGGTTTC
TAGAAGCAAACAGTACTGTCTTCCCGCTGCAGAAAGTCAGGCTTTTCTCTACAAGCCCTC
CTCCGGACTATATTTCGAGCATAGAAGATAAAAAGGCCATAACTGAACTCAAAGAGCTAA
AAAAAAACTACATCACCAAAACAACTTCTGGTGATAAACCACCGCCTATTCAAGAGGAAC
CGGATTGCGAACCGGAGTATCCGCAGAGTCCTATACCGGCCTCCCCTACGCGGTACACGA
AATGCAAGGGATTCCTTCTATCCACATTTTGCGATCCGTACATGCCAATCGATCCTCAAG
GTCGTCTCTACATAGGATGGCTCTGTCTAGTAACATTCTGCTACAGTTACAATGCTTGGG
GGATAGCTCTACGCTCTACATTCCCTTACCAAACACCAGAAAATACGCCCATGTGGTTGG
CAACCGACTATTTCAGTGATCTAGTGTATCTATTGGATGTCGCATTCGTGAAGCCAAGGT
TGATGTACTTACACGAAGGGTTCTGGGTCGATGACCCCGTTGAAACCAGGAAAAATTATA
AAAGGAAGGTGCAATACAAGTTCGATGTCATCTCGCTCACACCCCTGGACGTGCTATATT
TCTATTTCGGCACGCAGAAAGCGATCCTCCGGTTCCCGAGGTTGCTAAAGCTGCAAACGT
TTTGGGAATTCAATCAGGCGATGGATCGAGTGCTTGCCTCGCCCTACGTTGTCCGTATAG
GCAAGACGTTGTGCTACATATTCTACTTAATCCACTTGAACGCGTGCGCGTATTACGCGA
TGAGCGACCACATCGGGCTCGGTTCGAACGGTTGGGTTTACGACAACGAAGGCATCGCCT
ACATCAGGTGTTTCTACTTCGCAACTAAAACGGCCACGTCCATCGGGAAGAATCCGAAGC
CGGAGAACACGATCGAGTACCTGTACATGACCGCGGCTTGGCTGATGGGCGTGTTCGTGT
TCGCTCTGCTCATAGGCCAGATCCGGGACATCATAGCGACCGCAACAAGGGCCAGGACAG
AGTACCGCAAGGCGCTGGACGGGTGCGCGCGCTACCTGCGGCGACTCAACCTGCCGGCCG
CGCTGCAGCGCCGCGTCACGCTCTGGTTCAACTACACCTGGAGTCAGCAGCGATGCTTCG
ACGAGGCCAAAATACTGAACTGGCTTCCGTCGAACATGAAGCGAGACGTGGCGTTGGCCG
TGCACATGTCCACGCTCAGCAAGGTACAATTGTTTCGTGACTGCTCGGACTCTCTACTCC
GGGACTTGGTACTGCAGCTGAGACCCGTATCGTTCCTGCCCGGGGACCTGGTCGTGAGGA
GCGGAGACGTGGGGCACCAGATGTACATCATCAAGACTGGAGAGTGCTGTGTAATGTCCC
AGGACGAGACCGAAGTGCTGGCGACGTTAAGGGAAGGATCCGTCTTTGGAGAAATCAGTT
TATTGGGCATCGAGGGACTGCGACGGCGGACGGCCACAGTTCGGTCGCGTGGATATTCGT
CCCTGTTCGCGCTCTCCCGTAGCGACTTGGACGCAGCTTTAGAGTACCACAAAGAAGCAG
CCAAGGTGCTCCGCATAAGGGCGGATCAAATCATCAGGGAGAATGCAGCAAGACAAACCA
AACAGAGGCTCGCTGCGTTGGAAGCCAGGAAATCCGCTGAACTAGCGAAAAGACAGGAAT
CGGCGCTTAGAAGGAAATCTACCGTCTCTGGTCACAGCAATGCCACTGAAGGACGGAGAC
TGAGGGCTCCCAGTGCGACCTCCAAGCGAAGGTTGTCCACTGTCTCCGAGAAGAAGAATC
CTCGGGCTAGAGGTTATCGAACTTTGGCATCGACGTGCACCGGAATACGGACTCCGCTGC
CTACCATTGTATTTACAGCTGAATAAAAATATAAAATAAACGTTTCTAGTCATATAGACT
CTTCATTAGTATGTTGTGTATCCACTCTAATAATATCTAACTCTAACTATATTTATTATA
ATTGGAATAAAGTATTAATCATATTCTATGAAAATTATACGTTTTATGACATTAACATGT
CCATTAGTTCCTTCAGGGGTTATAAGAATTTCTAAAAACACATTCAGTGCCAAATATTAT
TTTTCAAATAACTGCAATTCGCTTTTTTTTTTGTTTCATTTATATCATCAAACATTTTTA
ATATGATGCCGTTAATGGAACACTTTAATTATTTAATTCATTTTCTATCAATTATTCACA
TTCACAAAAACATGTTAGTTTTGTATTCTTACAATACAAGATATAATTGATATTGTTCAA
TTAAACTATACAAGAGAAGATGATAACTTAGACGATGTTATTTCAAAAAATTAAAATAGT
GTCATTGGAATGCGTCCGTATCGGGTTCTAACTATACATAATCCAGCTCAAAATAAATGG
CAATACGTAATGTACTTTATATAAATAGGTACGGTACCTATGTAAAACTTTTTGGCGGGA
ACGGCATGTATTTCATTTTGACAGTTTAGTATTTCTTCAGATCATAGATAATAAATACGC
TTAAAATGTAATGAAGGAGGCTCATTTTTCGTTCAGTATTTGTAAATTTGGAATATTGCT
TAGCTAATTGGAACAAAATCGCGGGACATAGATTCCTATATAGTTTTATATAGAGCATGT
AGAAATAATTAGAAGAATTAACAAAGGATAAATGGTCGAGTTACGGTGGGCGAAAACAAA
ATTTTAAAAATATGTGGATCATTACTTAATTCATCTGTGAAATATACGCTATACGTAAAT
AGATGTTTATTTTTAAAAATTTTAGATTCTTATACGTAACTATAAACTGCAATTATCATT
TATGTGTGTGATGATATCGATA
(3202 bp)

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