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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29270_c0_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_cyclic_nucleotide-gated_cation_channel_beta-3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0005216 F ion channel activity
GO:0005221 F intracellular cyclic nucleotide activated cation channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005223 F intracellular cGMP-activated cation channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0007601 P visual perception
GO:0009187 P cyclic nucleotide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030553 F cGMP binding
GO:0042391 P regulation of membrane potential
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902495 C transmembrane transporter complex
Transcript
Level		FPKM:2.20 TPM:2.94
ORF EntryO_BomoN4EE11115_complete:A_BomoN4EE_TR29270_c0_g1_i1
Sequence
(Nucleotide)
GCAACATCGGTCGGACCGGGCGTGTTTGCACGCGGAAAATTCCGTACTCGAATTTTACCT
CGACATGTTAATTTTCCCGCGTCTGTTTACGTGCTGCGTAAATATTTAGGTGGCAAAATA
TGAACAATGAATGTGCGATGTTTTGAAAGAATAAAATGGAGGTAACAGTCGATGTGCACA
CAGTTCATCCTTCAACATCAGACCGTGATGTTAAATATGGAACTAAGACCCCATTGGCCC
GTGGGCCGTATGGTTCTTGGTGTACGCCAGAGACCTCGCCCATTCATCACCCGTTGACGC
AAACAAACTCGAACATCGAAACGAAAACTCAGCTTCAAGATCAGAAACGGTTTCTAGAAG
CAAACAGTACTGTCTTCCCGCTGCAGAAAGTCAGGCTTTTCTCTACAAGCCCTCCTCCGG
ACTATATTTCGAGCATAGAAGATAAAAAGGCCATAACTGAACTCAAAGAGCTAAAAAAAA
ACTACATCACCAAAACAACTTCTGGTGATAAACCACCGCCTATTCAAGAGGAACCGGATT
GCGAACCGGAGTATCCGCAGAGTCCTATACCGGCCTCCCCTACGCGGTACACGAAATGCA
AGGGATTCCTTCTATCCACATTTTGCGATCCGTACATGCCAATCGATCCTCAAGGTCGTC
TCTACATAGGATGGCTCTGTCTAGTAACATTCTGCTACAGTTACAATGCTTGGGGGATAG
CTCTACGCTCTACATTCCCTTACCAAACACCAGAAAATACGCCCATGTGGTTGGCAACCG
ACTATTTCAGTGATCTAGTGTATCTATTGGATGTCGCATTCGTGAAGCCAAGGTTGATGT
ACTTACACGAAGGGTTCTGGGTCGATGACCCCGTTGAAACCAGGAAAAATTATAAAAGGA
AGGTGCAATACAAGTTCGATGTCATCTCGCTCACACCCCTGGACGTGCTATATTTCTATT
TCGGCACGCAGAAAGCGATCCTCCGGTTCCCGAGGTTGCTAAAGCTGCAAACGTTTTGGG
AATTCAATCAGGCGATGGATCGAGTGCTTGCCTCGCCCTACGTTGTCCGTATAGGCAAGA
CGTTGTGCTACATATTCTACTTAATCCACTTGAACGCGTGCGCGTATTACGCGATGAGCG
ACCACATCGGGCTCGGTTCGAACGGTTGGGTTTACGACAACGAAGGCATCGCCTACATCA
GGTGTTTCTACTTCGCAACTAAAACGGCCACGTCCATCGGGAAGAATCCGAAGCCGGAGA
ACACGATCGAGTACCTGTACATGACCGCGGCTTGGCTGATGGGCGTGTTCGTGTTCGCTC
TGCTCATAGGCCAGATCCGGGACATCATAGCGACCGCAACAAGGGCCAGGACAGAGTACC
GCAAGGCGCTGGACGGGTGCGCGCGCTACCTGCGGCGACTCAACCTGCCGGCCGCGCTGC
AGCGCCGCGTCACGCTCTGGTTCAACTACACCTGGAGTCAGCAGCGATGCTTCGACGAGG
CCAAAATACTGAACTGGCTTCCGTCGAACATGAAGCGAGACGTGGCGTTGGCCGTGCACA
TGTCCACGCTCAGCAAGGTACAATTGTTTCGTGACTGCTCGGACTCTCTACTCCGGGACT
TGGTACTGCAGCTGAGACCCGTATCGTTCCTGCCCGGGGACCTGGTCGTGAGGAGCGGAG
ACGTGGGGCACCAGATGTACATCATCAAGACTGGAGAGTGCTGTGTAATGTCCCAGGACG
AGACCGAAGTGCTGGCGACGTTAAGGGAAGGATCCGTCTTTGGAGAAATCAGTTTATTGG
GCATCGAGGGACTGCGACGGCGGACGGCCACAGTTCGGTCGCGTGGATATTCGTCCCTGT
TCGCGCTCTCCCGTAGCGACTTGGACGCAGCTTTAGAGTACCACAAAGAAGCAGCCAAGG
TGCTCCGCATAAGGGCGGATCAAATCATCAGGGAGAATGCAGCAAGACAAACCAAACAGA
GGCTCGCTGCGTTGGAAGCCAGGAAATCCGCTGAACTAGCGAAAAGACAGGAATCGGCGC
TTAGAAGGAAATCTACCGTCTCTGGTCACAGCAATGCCACTGAAGGACGGAGACTGAGGG
CTCCCAGTGCGACCTCCAAGCGAAGGTTGTCCACTGTCTCCGAGAAGAAGAATCCTCGGG
CTAGAGGTTATCGAACTTTGGCATCGACGTGCACCGGAATACGGACTCCGCTGCCTACCA
TTGTATTTACAGCTGAATAAAAATATAAAATAAACGTTTCTAGTCATATAGACTCTTCAT
TAGTATGTTGTGTATCCACTCTAATAATATCTAACTCTAACTATATTTATTATAATTGGA
ATAAAGTATTAATCATATTCTATGAAAATTATACGTTTTATGACATTAACATGTCCATTA
GTTCCTTCAGGGGTTATAAGAATTTCTAAAAACACATTCAGTGCCAAATATTATTTTTCA
AATAACTGCAATTCGCTTTTTTTTTTGTTTCATTTATATCATCAAACATTTTTAATATGA
TGCCGTTAATGGAACACTTTAATTATTTAATTCATTTTCTATCAATTATTCACATTCACA
AAAACATGTTAGTTTTGTATTCTTACAATACAAGATATAATTGATATTGTTCAATTAAAC
TATACAAGAGAAGATGATAACTTAGACGATGTTATTTCAAAAAATTAAAATAGTGTCATT
GGAATGCGTCCGTATCGGGTTCTAACTATACATAATCCAGCTCAAAATAAATGGCAATAC
GTAATGTACTTTATATAAATAGGTACGGTACCTATGTAAAACTTTTTGGCGGGAACGGCA
TGTATTTCATTTTGACAGTTTAGTATTTCTTCAGATCATAGATAATAAATACGCTTAAAA
TGTAATGAAGGAGGCTCATTTTTCGTTCAGTATTTGTAAATTTGGAATATTGCTTAGCTA
ATTGGAACAAAATCGCGGGACATAGATTCCTATATAGTTTTATATAGAGCATGTAGAAAT
AATTAGAAGAATTAACAAAGGATAAATGGTCGAGTTACGGTGGGCGAAAACAAAATTTTA
AAAATATGTGGATCATTACTTAATTCATCTGTGAAATATACGCTATACGTAAATAGATGT
TTATTTTTAAAAATTTTAGATTCTTATACGTAACTATAAACTGCAATTATCATTTATGTG
TGTGATGATATCGATA
(3196 bp)

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