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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29246_c1_g1_i2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]
Ontology
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
Transcript
Level		FPKM:0.73 TPM:0.98
ORF EntryO_BomoN4EE10996_complete:A_BomoN4EE_TR29246_c1_g1_i2
Sequence
(Nucleotide)
CTGTCTGTTCATTTTCAACGCCGCTAGGGGGCGCTGTTCCAACTGCATACAAAATTGGGT
TAACTTTTACGCTATCGAGAACGTTAAAAAAACTCGCACTAAGCACACAGAGCGCAAATT
CCTGTCTGTTCATTTTCAACGCCGTGTGACTTAAAAATTAATGAAACATTAATTTTGAAA
CATGATTTTTAGTTACATCTTCGCTTTCGGTTAGACTTCATTAAAACATTCCCTGTAAAA
GACCTATATTATGCAAAAATGTAGCACTCTCTCCCGCTACTGTTATTCATCACAGCGACG
ACTAATACATGAGAGTCAGAAAGCCTGAGAGGAAAAGTAGTTTCCGTATCGAGAACTCGA
TACATTTACATTACGAATTCGATAAATTTTCGGGCTTGATCTATAGTTTTTCTCTCGTAA
TGAGGTCGCATAGCATTGTCTATAAATTGTTTAAGTGGAACTTTTCCGGGCAGAACGTTC
ATGGCCGTATTCCAAACGATTAGTCAGTACTCTTACATGAAAATTACAAAAATCAAATCT
CCAATTTTTATATCAAACTAAATAAATCACATCATATCTGACGAGCTGGAAAGATACTTT
GTTTATTGACTTCGTCGACTACGATCGAATTAGTCATCGTGTGCCATAAGAATATCAACA
GTGTTCATTTTCAACAGGCATAGTTTCAGCCTTCAATATTTCCTAAGCATTTATATAAAT
CGCCTTGCTGATTTGAAATAGCTTTAAATTTATGTTTCTATACAAAAGCATATAAAAAGA
TAATTACGAACCCGTCACTTATTTATACATCTTAACTGTAAACAACTGTTCATATTTACA
TGTGCAGTATATTTTACACAAACTATTAGGGCACAGACCAGTTCAGTCTATCGGAGCGAC
CGATGTCCGTGACCAACCAGCTGGGGATGTATTGCAAAATCCACGTCTTGTCGAATTCAA
ACAGCCTAATTAACAAACTTGAACCTTTGACTGGACTGTCCTTATATTGACGCCTTCCCG
AAACATCCAAAGACACATGACTCGTTGTAAGCTAGGGCTGCGGAAGCGCCGGGCGGAGGC
GTGTCAACAGCACAGGGCCAGAGCGCCCGTTGGAGGACAAAATATCAATTTTTATTTCCT
TTAAATTAATTCTTATACAACACAATTGAAACTTCAAAATAAACAGTAACGAGACGTTCA
TTAATAGGCCATAAAACTTATATTTATGTGTTTCAAAGCGAGTTCAAATTTCAGAAAGAA
CAGCTTGAAACATTTTAAAATACTCCATTAAAAATTGAATTTATTGATTCAGGAAGTCGC
ACCGATCTCGTATTGAAAGGAGTTGAAATAAACGTATCCGCCGGAAATCAAAAAATAAAT
AAACAGAAGTGATAAAAAATTAGAAATTGGTTTTACTAGATAAAGCATTTTTTTCACGAA
TTTTTCTAGATTTTTTTAGAAATATGTGTTTATAAATAAAATAATTGTGAGGTGAGTCTA
GTCACCCCCTTCCCTCTACAACACAACAGATTATATTAAAAACGTAATAAAATTCAAAAA
CATTTTTAACATATTTTGCAAAGTGAATTAAATTAGCTCATTCAGTTATTTTCTCCACAC
TCAGAGGTCTACTAAAACCGAGATTTATAAAAAGTTCACTGGATTTCACAAAATTCGTTT
TGATGTCTATATTACAAAAAGAAGCCTTCATAAACAAAATTTACATTCATGAATTCCAGA
AATAACCAAAACATATTACAAATTTGCATTTCATGAAAAAAAAATCAGCTGTCATAGAAT
AAGGCACATGAATAACAATTAATTGACGCTGTGACTTGTAAACATTTATAGAGAAATAAA
TTCCTAGCGAGTCATTATGAATTAGGATATTTTACAGTAACTCTAACAGCACTATACTTA
AAGATAGTTATATAAAGGTCCAGAATTCCTGACGAAATAATAGTTGTAACTTTGATGTAT
TTAGAAATCCAAAAGGCAACGTGAAAGTTTATGGCCTCTGCTACGGCTATTATTTCAACT
GAAAAACGATTTTGATTACATAATTGCTTATATTGTTTTTGAGTTTTGAGTAGCATACCT
GTCTAACTAGCTTAGGTATGACCTGATATCCGATTTGGTAGTAAACTAGGATCCCATTTA
TATAGCACACAAAGAGTCCCTCAAAACGATTATAAATACCTAACTTTGACTGCACCTAAC
CTAAGCGACCCTGTACTACCTGGCACCTTTCTCGTTCTTTTCCTTAGGTTTCTCTTCCAC
CACTTCCGCTTCCGGGTTATCTTGTGGCGGCCACAGGACATCAGGGTGGTTTAGCATATA
ATACGCCATATGCTTCTCACTGCCGTAAGTCGATGCCTTCGTTCCCAGACACATCTTGAA
CTGGCTCTTCTCTAAATTTTTATCACAGTCAACCGAATGGAATATATGGACTAGAGTCTC
GTCAGCTATCCTGTATACCGTTAAATTTGATTTAATTAGCGTTTCGAAAAGCTGCACGTC
TTCTAGACCCCAACCCTTAATGTTCAAATCGAATCCCCCTATCCGTTCGAAGTCACGTTT
ATAAATAGCTAAAATACCAAAACCGTACTGCCTGAAATAGCCCGTATCATCAGTTATTTC
CCGGCTGTACTTCAAGTTCGCCAATTCTCTGTCCGTTCTCACTGTTTCTTCGTCATCAAT
AAACTTCTCCAATTCAGTGTCCACAAACAGAGTTTCGCCTTTAACTTTATTATAATCATC
ACCGTTCACTACATCTGGATTGTACTCACTAAACACTATTGGGAAATAAACTTGGTTATA
TTTTATTGTGTTGATTCTGATTCTACGAAGGCTCTCGTGGTTGAACATCATGTCCACGTC
AATGAAGAAGACAAGGTCGTCGCTATCGCAGAGCTTGAGTCCCTCGGTCAAGGCGGCTCC
CCGTGAAAACATATTCGACCCCATTTTAACTATTTGGATGTCTTTCCCGTACATCTCGAT
ATAATAATTTATTAGTAATTCTGTGTTTCTATAATCTAGTGGATGTTTGCTATCTAAATA
AGCTACGACAATTAGAGAGGCAGCTTGACTGCTTTTTAAAACTATATCTTCGTAGTTCTT
CATGAATCTACCGAATGTCTCTTGTCTACCAGATAGGGGCAGAACGAAGTGTATTTTTCT
GTCATACACCGGATACTCTTCAGAATCATCACTATTCCACTTCAACACCTTGGGTAAGTT
GTTCTGGATCTTCTGAAGACCAGTTTCGAGAGCTTCCTTGACTTTTAATTTACCGAAGTC
CAAAAAGCTGCTCTGTTGAGCACTGGACTCGTCAAAGTCCTCGTAGTCGTTCGGATATAA
TCCATTCTCAGTCTTTTCTAGTATGACTGGATCTTCAAATGGAGGCGGATCTCCCATTGG
TAACTCTCTTATCTCCATACCTGTAAATGACTGCTGCAAATAAGCATGTCGTCTAACTGC
CGCTGTCATTTTCCTTCCTCTGTATCTCCTGTACTTCAACAGCAGATCCAAGATGTGATC
GGCCCCGTGCACCGGCTGGAGCCTGGTGTATCCGTACAGAAGCTCGTTGAAGTCAATCAC
ACGTCCTCGTTGACGAGACGGTGCATTAATAATCTCCATAACTTCTCTGATAACATCATC
CATAGCTTCTTTCAGGGGTAGCTCCACTCGTCTTTTCGGGTTTGAGTGGTAGGCGGAGTA
CAGGCTCTTGCTGATGAAGTCGAATATGACGATATCGTCTAGATTGGAGGGCTTGTACCG
ATTCATGTCTATCGGGGCACCTAATATTTTATTATCCCCCAAGTATCCTGGCTCCCCAAT
CTTGGCCGGGAACAGCGGGACGTCTCCGGGTAAGACAAAGTCATCGACCTCGTCCCGGGG
AATAGAGAGCTCCCGAAGCGCCGAGGAGATGTCCCGGTGGAGATCCAGGGAACGTTCGCG
AAGTTCTTGGATACGAAAGTTCTTGAAATATGAATGTATTCTGTACATCTGGCGATGGTC
TTTCACCGGATGCAAGGTGATGGCTCGGTGCACCTCTCTGGCTTTCAACCGACCGGTGTA
GGCAGCCTCGCCGCTGCCATTGTGATGGAGAATCGTTTGCATATCATAACTCCAAGTACA
GGATACACCGGCAAACTTGGCGACACAGCGACCCAGCTCCACGTCCTCGTGAGTGGAGTA
CAGGTGCTTCAAGCAGTACTTCACGTGAGGGGCCACTCTCCGCAGGGTCTCACGAGAAAT
CAGTACACCAGGACCACCCATACAGAAGTTCTCATTATAGTCCAAAGCTAGCACATCTTT
TTCATCGTTGGTTCCCCTACCAGCTTGCCCTATGAACTGAGGCTTGCGGCTGTCCACCGA
ACGCAGGAATTCCTCTAATTTATCACCTCTTACGTATACATCATCGTCCGCTCTCATGAA
CCACTCGAATTTCTCCCCATACTTTTCGTACATGTGCAACAACATGAGGAAAGATTTTTT
CTGAGGAGGATAACTGTCGTCTACGTTGCGCAGCGGCACGAGGGGCAAACCCGGGGCCCG
AGACACTTCTGAACTGAAAAACGCGATACGCCCCGGCAGGTCCTGGGCCCAGGTGTCGTA
CACTGCCCTCGCTCTCGTCGTCAAATATTGTTCGGCCGTCATCACACCGACAAACACTAG
AGTTCTGTTTGAATTATGAACAGTCTCGTTCGGGTTGAGACCTATTAAGGCTAGCGGTTC
CGGGTCCGCATACGAGCGGGCCGACTCCGGACAAGCCTCTATGCTCGTCCGCGAGGAAGT
CCTCAAACACAGCTTGAGAAACACTCCGAACACGACGCCGGCCACGAGCCCAGTCACCAT
GTGCATCCACCTACTTCTTCGAGGCATCATGGCGGTACTGCAGAATCAACACTAGCAACC
ACGATCACCCGGCGTCCACATGTGTACGTTCCAGGAATAACGTTTTTATCCCTTTTTTGT
ATCGTCCGGGAGGGGTAGACATCAGCGGGCTGCTTTTTTGTTCGGTTGTCGCTCCCGTCG
GGCGGGGAGCGCTCACATGGCCGCGCACGTCGCCGGCAGACCGTCGCGCAACTCGAAATC
GAACTCTATCGCGATATCGCCGGCCTAAATATCAGATTTTGCAGATGTTATCGGTGCGAG
CGCGGCGAGGCGCGGCGCCTGCGGTAATGCGACTCGTGCATGCTCCGCGTCGCAGCGAGT
CACCGAGCCGGGCAGCTGTTATCGCGCGAGAGCAGTTCGACTCGTGCGCCGCTCGCGAAC
CAACTGGACTGCTCCTCACAACAAAACCGAACCGTGCGGCGAGTGAGTGTCCGCCGTGCG
GAATGTGTCCCTTTCGCTCGTTCGCCGCTCCTCAATCTCCGTCCTCGTCGGGCGCGTCGT
GGGTCGCTCGATGTGAACTTGTCCCATTCATTGCGGCCAGTCTGAAGGCGTCGACAATAG
ACAATGCGGTATTCGCCTATTGTCTGCTGGGTCACCGTCTCGCGGAAACTCAATTTTTAT
GACCCATTTGGCGCGGTCCAGGAACCACGCGACAGCGGCGGAAACGGTTCCTTTACCTGT
TTCGACTCGTGAACAACCAGGTCGATTCGCGTGACGCCTCATGAAATGACCGCTTAAAAA
AATCGTCATTTTGCACTGTTTTCCTCTGCAGGCCTCATTTGATAAGTTGACAATTAGCGA
GAGACCGCATTATCATTGTATCGATTACATTTTTTGCTCTCAAATTGATGTGCGTCTGTT
CATTGACCCATTTGACACTAGCTGAGTGCGATCGTACGATCGCTTAAGTGAGTTGAAACT
GGAGTACTTTAAACTTTAGGCAACAATCTTATAATATAAAGTATACATACGAAATATAAA
ATTATAAAAACTACGTTCCTTAAATATAACACAAAATGAACAAAACAAAATAAAATATAT
TTTTCACGACGTATCATCATTAGGTACTATCACACAGGAGTAAAACACATAATACTTTAT
CATTATTTCTTGGCATTGACCCATTACATTACATTCAAAACGATAGCCCCTGCAACATGT
AAGAAACCCTTAAATTCAAGTTTATAAGGTTGAAAGTAGGACTGGGTGTTTAAATTGAAT
ACATGTGTACAAGAACATGGATACGTAAGATAAATCAAGCCTGTCTGGGCTTCTGAAAAG
ACAAATGCGTTATTAAATGATTGAAAATGAAGATCTACGGCGATAAATCATTGATATTTT
ATTGAATAAATCGATGGTCCAATTAATTTATTGGTTTTATATCAATCTCTGGTCAGTCCA
CGCAAACTGACGGTAAATTGAAAATACGTAATTTCTAAGCGACTTCAATTGAAAACAGAA
GACCTCATATTGCATTTGTAACGGGTTTTGTATTGTTAGCATGTCAATATTTAAACATAT
TTATTATAATGCTATTAGTATTTTATAACTATATAATTGTAAACAAACTTGCTTTCTGTA
AACAATTTCAATTTGGAACTGACTTCATGTTCATAATAATAATTGTCCAAAAGTAAAAAG
TAAATAATTTTAACAAACTTCAAAATAAAGGAATTCTCAATTCGGACACTGCCTATTTAA
TGTAAAATTTTAATCTTCATCCTCACTTTTTTTTATTGCATACACGGGTAAACGAACCAC
CTGATGTTAATGTCGACATCAACCTTGTGAGATGAGATCCAAGTCTTGATCGCATTGAAT
AATATTGCATGTAGGCACCACCCTTTAAAACGCATATCGCATATCTGCGGCAGAACGCAT
ATGTGCCACGCGGCAAAAATA
(6801 bp)

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