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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29246_c1_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]
Ontology
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
Transcript
Level		FPKM:3.67 TPM:4.89
ORF EntryO_BomoN4EE10992_complete:A_BomoN4EE_TR29246_c1_g1_i1
Sequence
(Nucleotide)
CTGTCTGTTCATTTTCAACGCCGCTAGGGGGCGCTGTTCCAACTGCATACAAAATTGGGT
TAACTTTTACGCTATCGAGAACGTTAAAAAACTCGCACTAAGCACACAGAGCGCAAATTC
CTGTCTGTTCATTTTCAACGCCGTGTGACTTAAAAATTAATGAAACATTAATTTTGAAAC
ATGATTTTTAGTTACATCTTCGCTTTCGGTTAGACTTCATTAAAACATTCCCTGTAAAAG
ACCTATATTATGCAAAAATGTAGCACTCTCTCCCGCTACTGTTATTCATCACAGCGACGA
CTAATACATGAGAGTCAGAAAGCCTGAGAGGAAAAGTAGTTTCCGTATCGAGAACTCGAT
ACATTTACATTACGAATTCGATAAATTTTCGGGCTTGATCTATAGTTTTTCTCTCGTAAT
GAGGTCGCATAGCATTGTCTATAAATTGTTTAAGTGGAACTTTTCCGGGCAGAACGTTCA
TGGCCGTATTCCAAACGATTAGTCAGTACTCTTACATGAAAATTACAAAAATCAAATCTC
CAATTTTTATATCAAACTAAATAAATCACATCATATCTGACGAGCTGGAAAGATACTTTG
TTTATTGACTTCGTCGACTACGATCGAATTAGTCATCGTGTGCCATAAGAATATCAACAG
TGTTCATTTTCAACAGGCATAGTTTCAGCCTTCAATATTTCCTAAGCATTTATATAAATC
GCCTTGCTGATTTGAAATAGCTTTAAATTTATGTTTCTATACAAAAGCATATAAAAAGAT
AATTACGAACCCGTCACTTATTTATACATCTTAACTGTAAACAACTGTTCATATTTACAT
GTGCAGTATATTTTACACAAACTATTAGGGCACAGACCAGTTCAGTCTATCGGAGCGACC
GATGTCCGTGACCAACCAGCTGGGGATGTATTGCAAAATCCACGTCTTGTCGAATTCAAA
CAGCCTAATTAACAAACTTGAACCTTTGACTGGACTGTCCTTATATTGACGCCTTCCCGA
AACATCCAAAGACACATGACTCGTTGTAAGCTAGGGCTGCGGAAGCGCCGGGCGGAGGCG
TGTCAACAGCACAGGGCCAGAGCGCCCGTTGGAGGACAAAATATCAATTTTTATTTCCTT
TAAATTAATTCTTATACAACACAATTGAAACTTCAAAATAAACAGTAACGAGACGTTCAT
TAATAGGCCATAAAACTTATATTTATGTGTTTCAAAGCGAGTTCAAATTTCAGAAAGAAC
AGCTTGAAACATTTTAAAATACTCCATTAAAAATTGAATTTATTGATTCAGGAAGTCGCA
CCGATCTCGTATTGAAAGGAGTTGAAATAAACGTATCCGCCGGAAATCAAAAAATAAATA
AACAGAAGTGATAAAAAATTAGAAATTGGTTTTACTAGATAAAGCATTTTTTTCACGAAT
TTTTCTAGATTTTTTTAGAAATATGTGTTTATAAATAAAATAATTGTGAGGTGAGTCTAG
TCACCCCCTTCCCTCTACAACACAACAGATTATATTAAAAACGTAATAAAATTCAAAAAC
ATTTTTAACATATTTTGCAAAGTGAATTAAATTAGCTCATTCAGTTATTTTCTCCACACT
CAGAGGTCTACTAAAACCGAGATTTATAAAAAGTTCACTGGATTTCACAAAATTCGTTTT
GATGTCTATATTACAAAAAGAAGCCTTCATAAACAAAATTTACATTCATGAATTCCAGAA
ATAACCAAAACATATTACAAATTTGCATTTCATGAAAAAAAAATCAGCTGTCATAGAATA
AGGCACATGAATAACAATTAATTGACGCTGTGACTTGTAAACATTTATAGAGAAATAAAT
TCCTAGCGAGTCATTATGAATTAGGATATTTTACAGTAACTCTAACAGCACTATACTTAA
AGATAGTTATATAAAGGTCCAGAATTCCTGACGAAATAATAGTTGTAACTTTGATGTATT
TAGAAATCCAAAAGGCAACGTGAAAGTTTATGGCCTCTGCTACGGCTATTATTTCAACTG
AAAAACGATTTTGATTACATAATTGCTTATATTGTTTTTGAGTTTTGAGTAGCATACCTG
TCTAACTAGCTTAGGTATGACCTGATATCCGATTTGGTAGTAAACTAGGATCCCATTTAT
ATAGCACACAAAGAGTCCCTCAAAACGATTATAAATACCTAACTTTGACTGCACCTAACC
TAAGCGACCCTGTACTACCTGGCACCTTTCTCGTTCTTTTCCTTAGGTTTCTCTTCCACC
ACTTCCGCTTCCGGGTTATCTTGTGGCGGCCACAGGACATCAGGGTGGTTTAGCATATAA
TACGCCATATGCTTCTCACTGCCGTAAGTCGATGCCTTCGTTCCCAGACACATCTTGAAC
TGGCTCTTCTCTAAATTTTTATCACAGTCAACCGAATGGAATATATGGACTAGAGTCTCG
TCAGCTATCCTGTATACCGTTAAATTTGATTTAATTAGCGTTTCGAAAAGCTGCACGTCT
TCTAGACCCCAACCCTTAATGTTCAAATCGAATCCCCCTATCCGTTCGAAGTCACGTTTA
TAAATAGCTAAAATACCAAAACCGTACTGCCTGAAATAGCCCGTATCATCAGTTATTTCC
CGGCTGTACTTCAAGTTCGCCAATTCTCTGTCCGTTCTCACTGTTTCTTCGTCATCAATA
AACTTCTCCAATTCAGTGTCCACAAACAGAGTTTCGCCTTTAACTTTATTATAATCATCA
CCGTTCACTACATCTGGATTGTACTCACTAAACACTATTGGGAAATAAACTTGGTTATAT
TTTATTGTGTTGATTCTGATTCTACGAAGGCTCTCGTGGTTGAACATCATGTCCACGTCA
ATGAAGAAGACAAGGTCGTCGCTATCGCAGAGCTTGAGTCCCTCGGTCAAGGCGGCTCCC
CGTGAAAACATATTCGACCCCATTTTAACTATTTGGATGTCTTTCCCGTACATCTCGATA
TAATAATTTATTAGTAATTCTGTGTTTCTATAATCTAGTGGATGTTTGCTATCTAAATAA
GCTACGACAATTAGAGAGGCAGCTTGACTGCTTTTTAAAACTATATCTTCGTAGTTCTTC
ATGAATCTACCGAATGTCTCTTGTCTACCAGATAGGGGCAGAACGAAGTGTATTTTTCTG
TCATACACCGGATACTCTTCAGAATCATCACTATTCCACTTCAACACCTTGGGTAAGTTG
TTCTGGATCTTCTGAAGACCAGTTTCGAGAGCTTCCTTGACTTTTAATTTACCGAAGTCC
AAAAAGCTGCTCTGTTGAGCACTGGACTCGTCAAAGTCCTCGTAGTCGTTCGGATATAAT
CCATTCTCAGTCTTTTCTAGTATGACTGGATCTTCAAATGGAGGCGGATCTCCCATTGGT
AACTCTCTTATCTCCATACCTGTAAATGACTGCTGCAAATAAGCATGTCGTCTAACTGCC
GCTGTCATTTTCCTTCCTCTGTATCTCCTGTACTTCAACAGCAGATCCAAGATGTGATCG
GCCCCGTGCACCGGCTGGAGCCTGGTGTATCCGTACAGAAGCTCGTTGAAGTCAATCACA
CGTCCTCGTTGACGAGACGGTGCATTAATAATCTCCATAACTTCTCTGATAACATCATCC
ATAGCTTCTTTCAGGGGTAGCTCCACTCGTCTTTTCGGGTTTGAGTGGTAGGCGGAGTAC
AGGCTCTTGCTGATGAAGTCGAATATGACGATATCGTCTAGATTGGAGGGCTTGTACCGA
TTCATGTCTATCGGGGCACCTAATATTTTATTATCCCCCAAGTATCCTGGCTCCCCAATC
TTGGCCGGGAACAGCGGGACGTCTCCGGGTAAGACAAAGTCATCGACCTCGTCCCGGGGA
ATAGAGAGCTCCCGAAGCGCCGAGGAGATGTCCCGGTGGAGATCCAGGGAACGTTCGCGA
AGTTCTTGGATACGAAAGTTCTTGAAATATGAATGTATTCTGTACATCTGGCGATGGTCT
TTCACCGGATGCAAGGTGATGGCTCGGTGCACCTCTCTGGCTTTCAACCGACCGGTGTAG
GCAGCCTCGCCGCTGCCATTGTGATGGAGAATCGTTTGCATATCATAACTCCAAGTACAG
GATACACCGGCAAACTTGGCGACACAGCGACCCAGCTCCACGTCCTCGTGAGTGGAGTAC
AGGTGCTTCAAGCAGTACTTCACGTGAGGGGCCACTCTCCGCAGGGTCTCACGAGAAATC
AGTACACCAGGACCACCCATACAGAAGTTCTCATTATAGTCCAAAGCTAGCACATCTTTT
TCATCGTTGGTTCCCCTACCAGCTTGCCCTATGAACTGAGGCTTGCGGCTGTCCACCGAA
CGCAGGAATTCCTCTAATTTATCACCTCTTACGTATACATCATCGTCCGCTCTCATGAAC
CACTCGAATTTCTCCCCATACTTTTCGTACATGTGCAACAACATGAGGAAAGATTTTTTC
TGAGGAGGATAACTGTCGTCTACGTTGCGCAGCGGCACGAGGGGCAAACCCGGGGCCCGA
GACACTTCTGAACTGAAAAACGCGATACGCCCCGGCAGGTCCTGGGCCCAGGTGTCGTAC
ACTGCCCTCGCTCTCGTCGTCAAATATTGTTCGGCCGTCATCACACCGACAAACACTAGA
GTTCTGTTTGAATTATGAACAGTCTCGTTCGGGTTGAGACCTATTAAGGCTAGCGGTTCC
GGGTCCGCATACGAGCGGGCCGACTCCGGACAAGCCTCTATGCTCGTCCGCGAGGAAGTC
CTCAAACACAGCTTGAGAAACACTCCGAACACGACGCCGGCCACGAGCCCAGTCACCATG
TGCATCCACCTACTTCTTCGAGGCATCATGGCGGTACTGCAGAATCAACACTAGCAACCA
CGATCACCCGGCGTCCACATGTGTACGTTCCAGGAATAACGTTTTTATCCCTTTTTTGTA
TCGTCCGGGAGGGGTAGACATCAGCGGGCTGCTTTTTTGTTCGGTTGTCGCTCCCGTCGG
GCGGGGAGCGCTCACATGGCCGCGCACGTCGCCGGCAGACCGTCGCGCAACTCGAAATCG
AACTCTATCGCGATATCGCCGGCCTAAATATCAGATTTTGCAGATGTTATCGGTGCGAGC
GCGGCGAGGCGCGGCGCCTGCGGTAATGCGACTCGTGCATGCTCCGCGTCGCAGCGAGTC
ACCGAGCCGGGCAGCTGTTATCGCGCGAGAGCAGTTCGACTCGTGCGCCGCTCGCGAACC
AACTGGACTGCTCCTCACAACAAAACCGAACCGTGCGGCGAGTGAGTGTCCGCCGTGCGG
AATGTGTCCCTTTCGCTCGTTCGCCGCTCCTCAATCTCCGTCCTCGTCGGGCGCGTCGTG
GGTCGCTCGATGTGAACTTGTCCCATTCATTGCGGCCAGTCTGAAGGCGTCGACAATAGA
CAATGCGGTATTCGCCTATTGTCTGCTGGGTCACCGTCTCGCGGAAACTCAATTTTTATG
ACCCATTTGGCGCGGTCCAGGAACCACGCGACAGCGGCGGAAACGGTTCCTTTACCTGTT
TCGACTCGTGAACAACCAGGTCGATTCGCGTGACGCCTCATGAAATGACCGCTTAAAAAA
AATCGTCATTTTGCACTGTTTTCCTCTGCAGGCCTCATTTGATAAGTTGACAATTAGCGA
GAGACCGCATTATCATTGTATCGATTACATTTTTTGCTCTCAAATTGATGTGCGTCTGTT
CATTGACCCATTTGACACTAGCTGAGTGCGATCGTACGATCGCTTAAGTGAGTTGAAACT
GGAGTACTTTAAACTTTAGGCAACAATCTTATAATATAAAGTATACATACGAAATATAAA
ATTATAAAAACTACGTTCCTTAAATATAACACAAAATGAACAAAACAAAATAAAATATAT
TTTTCACGACGTATCATCATTAGGTACTATCACACAGGAGTAAAACACATAATACTTTAT
CATTATTTCTTGGCATTGACCCATTACATTACATTCAAAACGATAGCCCCTGCAACATGT
AAGAAACCCTTAAATTCAAGTTTATAAGGTTGAAAGTAGGACTGGGTGTTTAAATTGAAT
ACATGTGTACAAGAACATGGATACGTAAGATAAATCAAGCCTGTCTGGGCTTCTGAAAAG
ACAAATGCGTTATTAAATGATTGAAAATGAAGATCTACGGCGATAAATCATTGATATTTT
ATTGAATAAATCGATGGTCCAATTAATTTATTGGTTTTATATCAATCTCTGGTCAGTCCA
CGCAAACTGACGGTAAATTGAAAATACGTAATTTCTAAGCGACTTCAATTGAAAACAGAA
GACCTCATATTGCATTTGTAACGGGTTTTGTATTGTTAGCATGTCAATATTTAAACATAT
TTATTATAATGCTATTAGTATTTTATAACTATATAATTGTAAACAAACTTGCTTTCTGTA
AACAATTTCAATTTGGAACTGACTTCATGTTCATAATAATAATTGTCCAAAAGTAAAAAG
TAAATAATTTTAACAAACTTCAAAATAAAGGAATTCTCAATTCGGACACTGCCTATTTAA
TGTAAAATTTTAATCTTCATCCTCACTTTTTTTTATTGCATACACGGGTAAACGAACCAC
CTGATGTTAATGTCGACATCAACCTTGTGAGATGAGATCCAAGTCTTGATCGCATTGAAT
AATATTGCATGTAGGCACCACCCTTTAAAACGCATATCGCATATCTGCGGCAGAACGCAT
ATGTGCCACGCGGCAAAAATA
(6801 bp)

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