SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29237_c1_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_neural-cadherin_isoform_X2_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0007413 P axonal fasciculation
GO:0008013 F beta-catenin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016318 P ommatidial rotation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0019233 P sensory perception of pain
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031290 P retinal ganglion cell axon guidance
GO:0042803 F protein homodimerization activity
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045296 F cadherin binding
GO:0045463 P R8 cell development
GO:0045467 P R7 cell development
GO:0046872 F metal ion binding
GO:0048675 P axon extension
GO:0048814 P regulation of dendrite morphogenesis
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0048846 P axon extension involved in axon guidance
GO:0050774 P negative regulation of dendrite morphogenesis
GO:0050839 F cell adhesion molecule binding
Transcript
Level		FPKM:15.01 TPM:19.99
ORF EntryO_BomoN4EE10963_complete:A_BomoN4EE_TR29237_c1_g1_i1
Sequence
(Nucleotide)
CAGGGTTTTACTTTCTTTGCCCCTTGGCGAGTTTCAATTTTAAAGTATCTCGTCCGGGCG
GGCCGAGGCGGCGACGACTGCGCGCTCGCCTATCGAAGGAACCGCCTTTGTTACGGCATC
GACAAAGTTTTGTACAGCTTTTCTCGAGATAAATAATTTAATCTTTAATATCCATTTAAA
CGAGCCGCTGTAGTTGCTACAGGAGGCTATACCGCCAACACACTGCAAAATTCCCACGAA
GATTTTATGAATGTAAGCCGGCTTACTTTGATGCACTCGTTTGCCTTTAAATGTTGTGGT
TTCACGAAGTAAATATATTGTTATGCGTTAAGATGTAAATAACAGTCTTCGAAAGAGAAA
ATCGTTGAATAGGTAAGCTAGAAATTTGAATTTTTCGCGCTTACTCCATTCTCAACGTCT
TATGTGACATTTCTCGAAGTCTCCGTGTTTAAATCTGTGTATTTATCGAACATCTGCAAG
TTCGTGAAGAAGCCGTTCGTTTTTTCGGATCTTAAATTTGGATGAGGTACAAATTCGGTT
ACTTTTTTTTTCAGTAGTGCAGAACAGGTAATGGCCTATCTCGTTTGAAATTGGTACCGA
AGCCCACAAACAAAAAAGTGAATGCGGCTGTCAGTGTTGAGATATAACTCTCTATTACAA
TAGAGAAACAGTTTTCTTACCCTTCAAACTAGAACACATTATTGCTTCACAGCAGGAACG
GGTAGGCCCCGGCCGTAGCTACTCTTCGTACGGGCTCTTAACCAAATAAACAATTACTCT
GAACAGAACTAATAAAAACGTATATATAAAGCGAAGTCATTTACACGAACAATAACAACG
GAAAGTTATTTAAAAAATTTGATTAGTCACTAATGAAATTCTCTGGTCACTGCGCCACGG
TTTTCGTAGAGTACATATAAGAAATGTCAATCATTGTTCGAAGTATGTCGAGGATCTAAT
GAAAATTGCAACATCCAACACCAAACTTGTATAATATGCGTGAGATGACTTTTGTAACAA
ACATTCTCCGCCCGACTGAGGAAATTACCGAGCGACACTGACAGATGACACCAATAACTC
CGTCGGGTCGCAAGCACGCTCACTCTATTTTCGAAGCCAAGTGTGGACTTGTGCCCAAAG
TTACGTTACGGATGGATTTATTTGCGGGTCGCTTAAGTAGTTCTTTTATCGCTAATGAAG
CAAGTTACTAAATAAACAACGAAACTCCCTTTCAGGACCGGAGATTAGGAGTTAAACGAT
GATTTAAAAATTGTTTTAGCACATCTTGCTTTTTGTGGGTGAGCAGAAGCGACGCCGCAC
CTTCTCGTAAAAGTGAAAAGTGAAAAATAGAACAAAAATCTTTTTGAAAATCTAAATTAC
AATTCGTGACTTTGCTAAATCGGTTTTGCTAAATTATTGCGAATGCTGAATTACTCGTCT
TTTATGAAATACTGAAAAGTATTTAATTCATTGAAACTTTAAATTTTTAACGGAATTTGT
AGATTACAGTATTAAGCACTTTATTTTTGGGTAAACACTCGATTCCTGAGAAACCTATCA
TCGATTCTTAACGTCTTGCCAAATTGTTTGGGTCCACAATAGTACGAGCTGAAGTTAGCG
GCGTCCGACAACCTAAAGGAAAACTACACAACGGTGGTGATTCACGTGAAAGACGTCAAT
GACAACCCTCCAGTTTTCGAGCGACCTACGTACCGCACACAGATCACCGAGGAAGATGAC
CGCAATCTTCCAAAACGCGTTCTTCAGGTAACTGCAACCGACGGCGATAAAGATAGGCAG
CAAAACATTGTCTATTTTCTGACTGGTCAAGGCATCGACCCAGACAATCCTGCAAACAGT
AAATTCGACATTAATCGCACTACGGGAGAGATATTCGTATTAAAATCCTTGGATCGTGAT
CAACCAAATGGGCGACCGCAGTGGAGATTCACTGTATTTGCACAAGACGAAGGCGGTGAA
GGACTCGTGGGCTACGCAGACGTTCAAGTTAATCTAAAAGATATTAATGATAATGCGCCT
ATTTTCCCTCAAGGCGTATACTTTGGTAATGTTACGGAAAATGGTACAGCTGGGATGGTT
GTTATGACGATGACGGCTATAGATTACGATGATCCAGCTGAAAGTAATAATGCGAAGCTT
TGGTACTCTATAGAAAAAAATGTTATTGAAGAAGAGACAGGATCGCCTATATTTGAGATC
GAGCCAGAAACTGGTGTAATAAAAACTGCTGTCTGTTGTCTAGATCGAGAAAGAACCCCA
GATTATTCAATTCAAATAGTAGCATCAGATGGAGGCGGTCTAAAAGGAACTGGTACAGCA
TCAATTAGAGTTAAGGACATAAATGATATGCCGCCTCAGTTTACTAAAGATGAATGGTTT
ACAGAAGTAGATGAAACAGACGGAACTAATTTACCAGAAATGCCCATCTTAACTGTGACC
GTTCACGATGAAGATGAAACTAATAAATTTCAGTATAAAGTTATTGAAAATAGCGGTTAT
GGTGCTGATAAGTTTACTATGGTTAGGAATAATGACGGGACAGGTTCATTAAAAATTGTA
CAGCCTTTAGATTATGAAGACCAGTTACAGAGTAATGGTTTCAGGTTTAGAATACAAGTT
AACGATAAAGGAGAAGATAATGACAATGATAAATATCATGTAGCTTATTCATGGGTTGTG
GTTAAACTTAGAGATATAAACGACAATAAACCTCAATTTGAAAGAGCCAATATTGAAGTA
TCTGTGTACGAAAATGCAGAGGTGGGTAAAAGCTTAGAAACCTTTAAAGCAACTGATCCT
GATCAAGGAGGAAAAAGCAAAGTATCTTACGCGATTGACAGATCGTCTGATAGGAAAAGA
CAATTTTCAATCAACCAAGAAGGAACTGTCAGTATACAAAGATCATTAGATAGGGAAGAT
ACACCTCGACATCAAGTAAAAATTTTAGCTATAGACGATGGTGTTCCTCCACGAACAGCA
ACTGCTACTCTCACAGTTATTGTACAGGACATTAATGATAACGCACCGACATTTTTGAAA
GATTATAGACCTGTTTTAACGGAACATATTACACCAAAAAAAGTAGCCGAGATTTTAGCT
ACAGATGACGATGACAGATCTAAAAGCAACGGTCCACCATTTCAATTTCGTCTAGATCCC
GGTGCTGACGACATAATAAGAGCTTCTTTTAAAGTTGAACAAGATCAAAAAGGAGCAAAT
GGAGATGGCATGGCGATTGTTTCTTCACTACGTTCTTTTGATCGAGAGCAACAGAAGGAA
TATTTAATTCCCATAATCATCAAAGATCATGGGAATCCTGCTATGACTGGAACTAGTACT
TTAACTGTAGTTATTGGAGATGTAAATGATAACAAGATGCAACCAGGTTCCAAAGACATC
TTAGTGTATAGTTATCAAGGTCTGTCACCTGATACTGAAATTGGGCGTGTCTATGTATAC
GATTTAGATGATTGGGATTTGCCAGATAAAAAATTCTTCTGGGAAAATACTGAAAATCCG
AATTTCACTTTAAACGAAGAAACTGGTATGATTACAATGAAACAAAAAACAAGAGAAGGA
AGATACCATTTGAAATTCAAAGTATATGATAGAAAGCACACACAAACAGATGTGCCTGCA
AACGTAACTGTTTACGTTAAGGAAATATCACATGAAGCCATAATAAACTCAGGTTCTATT
AGAATATCTGGAATATCTGATGAAGATTTTATAAGAGTGTGGAATTATAAAACTCTCAGC
GTTTCAAGAAGTAAATTAGACATATTCAAAGATAAATTAGCGGATCTTTTGAATACGGAA
AGAGAAAATATAGATATATTTAGTGTTCAACTCAGGAAAAAACATCCACCCGTAACTGAT
ATTCGATACGCTGCCCACGGAGCACATTATTATAAACCAGTAAGATTAAATGGTATTGTA
TTGATGCACAGAGAAGAGATTGAAAGGGCGGTCGGAATAAATATAACCATGGTCGGAATC
GATGAATGTCTCTATGAAAATCAAATGTGCGAAGGTTCATGCACTAATACATTGGACATA
AGCAGCTTACCCTACATGGTAAATGCAAATAAGACCGCTCTTGTTGGTGTGCGCGTTGAT
GTCATAGGACAGTGTACATGCGGTGCACGTAATTTTACTCAAGCTGAAACATGTCGCAAT
TCACCATGCTATAACGGCGGTAGGTGTATTGACGGAAAATATGGACTAACTTGTTCATGT
CCACCTGGTTATACTGGGCCGCGATGTCAGCAAACGTCAAGGAGTTTCAGAGGAACGGGG
TGGGCTTGGTACCCATCTCTAGAAATGTGTGATGATTCACATCTAAGTTTTGAATTTATA
ACAAGAAAGTCCGAAGGTGTTTTAATCTACAACGGACCCATTGTTCCACCTGAGTCCGAA
GAAATCATGGTATCCGATTTCATATCTATAGAATTAGAAAGAGGCAATCCAAGATTGTTG
ATTGATTTCGGATCGGGTACCTTAGAATTAAGAGTGAAAGCAAAGAAATCTTTGGATGAT
GGAGAATGGCATCGAATCGATATATTTTGGGACACTGAAAACGTAAGAATGATTGTAGAC
TATTGTAAATCAGCTGATATCCAAGAAATGGAAGATGGCACTCCACCCGAATTCGACGAT
TCTACATGTCAAGCAACTGGGACGATTCCTCCATTCAATGAATATTTAAATGTAAATGCT
CCACTTCAAGTCGGTGGTTTATATATAGAACACTTTGACCCTACACATTATCACTGGCAG
TATATGCCAATCGGCAAAGGATTTGACGGATGTATTCGTAATTTGATCCATAACAGTAAA
CTGTATGATTTAGCTCATCCGGGTCTTTCTCGAAATTCAGTAGCAGGATGCCCACAGACA
GAGGAAGTGTGTAATCAAGCTGATACAACATCTAGATGCTGGGAGCACGGAACTTGTGTT
GGGAGTTTTTCGGAAGCGAGATGTCAATGTCAGCCAGGTTGGACTGGTCCTTCGTGCAAT
TTACCAACAACGCCCACCAGTTTCAGACCCCAAAGCTATGTAAAATTTGCTTTAAGTTTC
GAACCGGACCGATTTAGTACACAGATTCAGTTGCGTTTTAGAACACGGGAGCCTCACGGT
GAATTATTCAGAGTGAGCGATCAACACAACCGCGAATATGGAATATTGGAAGTAAAAGAC
GCTCGTCTACATTTCCGATATAACCTTAATTCCTTGAGAACCGAAGAACGTGATGTGTGG
TTAAATTCTGTCGCTGTCGATGATGGCCAATGGCACATTGCTCGGGTCAGTAGATATGGA
AGTGCTGCGACACTAGAGATAGATGGCGGTGAGGGACGACGGTACAACGAAACATTTACA
TTTGAAGGTCATCAGTGGCTTCTTGTAGATAAACAAGAAGGTGTTTACGCTGGCGGAAAA
GCCGAATACACTGGAGTGAGAACCTTTGAAGTATATGCCGATTTCCAAAAAGGTTGCTTG
GATGATATAAGATTGGAAGGAAAACATTTACCTTTGCCGCCGGCTATGAATGGAACGCAG
TGGGGTCAAGCAACAATGGCCCGTAATCTCGACCGCAATTGTCCTTCAAACAGTCCTTGC
ATTAACGTGCACTGTACGGAACCCTTTGTATGCGTCGATCTGTGGAACGAATACGAATGC
ACGTGTCCGGGAGGGTCCGTCCGTGCTGGCAGTACTTGTATGAACGTCAACGAGTGTTTG
GAGCGGCCTTGTTTAAACGGAGGCACGTGCGTAGATCGAGAGCCTACCAGAAGATATGAC
TGCATATGCAGTTTCGGCTACGCCGGTCACGACTGCGAACTCGAACTTCTTGCTTCAGGA
ATAATTACACCCTCGAGAGACTTCATTATAGCTATTATAGTTTGTTTGTTCATGCTTTTA
GTATTGGTGTTGGTATTCGTGGTGTATAATCGACGTCGCGAGGCACATATCAAGTACCCC
GGTCCTGATGATGACGTTCGCGAGAACATCATTAACTACGATGACGAAGGTGGCGGTGAA
GACGATATGACCGCTTTCGATATCACCCCTCTGCAGATACCGATTGGAGGACCTCTGCCC
GATCACGCACCCGCTAAACTACCATATCCATTGATAGGCGTTGGCTTAGGCGTTGGTCCA
ATTGGCGTTGGAGTGGGGGTGCCTCCCGGTGTTGGGATGCCGATGCCCGGCGAAACCAAC
GTTGGTCTGTTCATCGAGGAACACAAACGGCGCGCTGACAGTGACCCTAACGCACCGCCC
TTCGACGATCTGCGTAACTACGCTTACGAAGGCGGCGGCAGCACTGCTGGATCATTATCC
TCGCTCGCTTCTGGCACCGACGACGAGGCCCACGACTACGACTACCTGGGGGCCTGGGGT
CCGAGGTTCGACAAACTCGCCGATCTGTACGGGCCCGACCTCGACGAGCAACTGTAAAAA
CGTACCGACAAACGCGCGACTGCGCGCTCATTTAGTCAATTGTCTCCCACTATCGTACCC
CCTAAATAACTCTAACATGCTGTCTCGGGAGCCCACTCCTCATCGACGCGTCTTCATCCT
GTAAATAAAAAGCTCCCGTGTTAAAATGAGCACGGGCCGCTTTGACTTCGTTCGTAATCT
CAACAATTTTATACGACCTTATTTACAAGACATACTTAGCTTTACAATTGATTTTATTAT
TATAGATAACTTAATTGCGTCGTTTTGTAAGGTAAAATATTTCACCAAATATTCGTTGTA
AGTTTATTATTTGTATTAGCCATATTATGAGTCAGTATTTTATTGGATTTAACGTATGTC
GGCTTATTTCTGAGGGAGGATCGCGCTTGAATTTCAGAACGGATGTAGATAGTGTGTGTT
ATAAGGAGAGTGAATAATTTATACGAATATTTTGTAAGCGTGCAAATTTACGTAATATCA
GTTGGATCGTCGACCTTCCCTCGTGAAACAGCAACTAGTGTTTAATAAATATAATACGTT
TATATGTATTTTAACATAGCAATTATTGAATATCACGAAATTACATTAGAGTCAACAATG
CATGATGCTCATACGAAACGAAAAACTTATTAAGGGAGCTGTATATATATAGTAAAGATA
TTGAAGCTCCTACTTTTAAATAAAAATATAAAATATTGGATACGCTAATTGATACGCGTA
ACTGTACAGTAATTGGTGTTCCTCTCCTAAAGTCTCCACGTAGTGCTAGTTATATAGAAT
ATTCGGGAACGACTAAAGTCTACTCGTGCAGTAGGTTAATATGATATAATATTATGATAA
TAGGTAATGGGTCGCTGAACTTCTCACTCTGTGTGCGTATGTGTTATGCGAGTATGAATG
AGCATGAGTACCTCGTGTACCTATGTGCGTGTAAGAGAATGTGTGCGTCGGATGTGTGTA
CAAAGGCACGGCGACGGGCGCGTCCTAATGAATGGGATTGTGCCAATACTAAGAATCCCC
TGAGCGGCTATGACAGTAGATTTAAATCTCAGCACATTATTTATTCGTATGATAACAATG
TTAAATTTAGTCGCACCTAGAAAAATATCAATAACTTATTAAGAGTGTTGTGCTAGAATA
TTTCGATTCAATTTTGACGTGAGACGCGCCTTTAGAAACGTAGAAGTCATTATTTATAAA
ATTATTTTTAAGGTTTAATAGTAAAATTATTAATCTACGTGCCGTTTCACGTCAAGATCG
GTGTACAATCACTGTACGTCTAGAGTATAATGTTGCGTTAAAATGACTGATTTTTATTAC
ATATGCGTTTGAAGTCTAAGATTTTTTTAAGTCCTTGTTCAAATAGATTTCTAATTACAG
GCCTCATTATAAATTCACCTTCTAGTTTGCACCGATGACAAATAATAGTTAATATTGTTC
ATGATCAAATGTTAAAATCAGTAATAAAGCATTTCTCGTTAATTAATGTAATTATAAGTA
GAATTTCATAGATGTTACATAACTATTTATTTTTATGTCATTACACTGCCAGTTACATAC
ATATAGATGAGTAACGATAGCGGCTTGGGTCCGGTTTTATATTTTGTCTTATACAACAAT
GTATTGTAAGTTTTTTAAACTGTTTTTATAACGTTTTTTTTCACGACACAGTTTCGATAC
GAAGCACGCGATTTTTATGCTCTGCAGATTTCGATGTGTTTTATTTTGTAATTTTATAAT
AGTAAAACGATTCCGTAGTTACCCCATTGAAATAGATCAAAATTGTATGCGCACAACTCA
GAAATTTGATTTTAGTGGAACACCAAAGTTAATGAAATATTTGTAAAGAAGTAATAGGAT
GAGGACTAATCTCGGAAATGGTGAAATTCATTATAATTCAATTTTCTTTCTCCCTTTGAT
TATTAAATATCAAAATACGTAAGTAGTAAGGAAAGTGCTGAATCTATATTTTATTCAAAT
CATCTCCTCGCTGTGAACTCGCGAAATATGCAGTTTTACAAACAAAGCTTCGCAATATTG
TGAGTTTTAAAGTGCAATACAAATGTTAATCTCTTTATTTTTCAGGCTAGAGATATTATT
TTAAAACATTTTAACAATGTTCAAAATTATTTAAAGAAATATATATATACTATCGGGTAT
GCTTACAGTGAATTTATGAAAACCTAATTAAGGAAAAGGCTGACGCACACTTTCGAGAAA
TAGATTTTATCTGCGCGTCGCACGAATTTTCAAATATTAAAATAAATTTAAGTAGTTTCC
GTTGAGAGTAATCTCATTAAGAATTCTGGTAACAAACATTTGCGCATTTGTTGATGAAAT
TCGATCACAATCACTCACAACTCAATAATTTAATTTTATGGAAAACAAATTCTCTTTTAT
TTCCATTTGTTCTTGTAATGGTGAGATAGAATACTTTTTTCAATACACAATTTTATTAAT
AAAACTTAGACCTGTCAATACAAAACCGATCGACAGACATAGCAGAAAAAGATACTGAGT
TTTTTTTTTGTTTTGTCTCCATGTATAAATATAGCGAGGAATCAATCGAATTCTCTAGAA
AAAATTTAATCTTAAAGGATTTTTGTTTCATTACTGTATTGAAAACGAAATTGATGGGGA
TAGTTTTTATTCATTTCACATAATATTATGTATACAAAAATTAGACTGCAGAGCACGAAA
TCTCGATACGTAGAAATACTTGAAGACGCTGTAACACGTCTATTGATCAGATTTATATTA
TGATTTTAGTAATAATTTTGATATTGTACCGCGTGGTTATGTTTTGTTTCAACTGTGATT
ATTTAGTTGTACAACTCTGATGACGATTACATAAAAGAATGAATAAAAAATATGGAAAAA
AAAA
(9364 bp)

- SilkBase 1999-2023 -