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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29170_c0_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_Ubiquitin_carboxyl-terminal_hydrolase_22_[Danaus_plexippus]
Ontology
GO:0000124 C SAGA complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008347 P glial cell migration
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021782 P glial cell development
GO:0036459 F thiol-dependent deubiquitinase
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071819 C DUBm complex
Transcript
Level		FPKM:0.34 TPM:0.46
ORF EntryO_BomoN4EE10883_complete:A_BomoN4EE_TR29170_c0_g1_i1
Sequence
(Nucleotide)
AAATTAAAATAAGACATGACTTAAAGGTCTTAGTTACCAGGTCATAAAATCCCTTAAAAG
AAAACACACACACACCCCGCGCCCCGTTCACAGCTTAGAGTCAAATAATTTCATTCAAGT
CAGCTTCAGCAGCATAGATAATATACCTCCTGATATACCGATCAGCAGTCAGATTCGATT
TCTTGGTTCAGAATTTTAAATTTTCATTTAATTGCTTGTTTTCAGTATTAATGTTTTGTT
ATTTTTATTTTGGTTACCGACCGTCATTATCTTATTATGCTTTCATTCTAATTTCTGTCA
GCGAGATATCTTTGTAACCGGTGAATTTACAAGCCAAAATAATGAATGACAATGGTTGCA
TACACCTAAATAATTTTAAGGCTGCTAAAGGCACTAACCCATATAAAATCGTACATGCAT
TTTTTGTTTCCTGTACGTCGTATGAAGCACGGAGATACAAGGCAACATCCTGTCTCTGCT
TTGCTTGTGGCCAGCCTGGACCTCGTATGCATTCATGTCTCCACTGTATCTACTTTGCAT
GCTATGCTGGTCATATTCAAGAACACTCCAAATCTAAGAAACACTTCCTGTATGTTGACC
TTAGCTATGGAAATGTCTTCTGTGCTCAATGCCAAGACTACATTTATGATAGGGAGCTTA
CTGAGATCGCTGCAATACATAAGGCAAAGGAGGCTAAGTCCCTTGGTATAAGCATACCTT
TTATGCCATGGTTACCAAACCATAATGAAGCAATGGCTCTTCGTCGCCTACGTAAACGGC
GCCTTATCAGTCCTCATACTACAATAGGTTTACGGGGCTTACAGAACCTAGGATCAACAT
GCTTCATGAACTGCATTGTTCAGACACTAATTCACACTCCACTCCTGAGAGATTATTTCT
TAGCAGAAAAACACAAATGTAAGTCGCAAAGTTCTAGCAAATGCTTGGTGTGTGAAGTTT
CCAAACTATTTCAGGAGTTTTACTCTGGAGCAAAAACACCGCTGACTTTGCATCGTCTAT
TACACTTAATATGGACTCACGCCCGTCACTTGGCTGGATATGAACAACAGGATGCTCATG
AATTCTTCATTGCCACTCTTGATGTGCTGCATAGACATTGCATGAATGGAGTAGAAGATA
CAGAAAAAAAAGGAAAATGGGCGTTGTAATTGCATTATCGATCAGATATTCACCGGCGGA
TTACAAAGCGACGTCGTGTGCACCTCCTGCTCTGGAGTCTCCACTACCATCGATCCGTTC
TGGGACATCAGTCTTGACGTGGCCGGGCCGGGTTCCCTGCAAGCTTGCTTGGAACGTTTC
ACCAGAGCCGAACACCTGGGCTCGGCGGCGAAAATAAAATGCTCCAACTGTCGCGCCTAC
CGTGAATCCACCAAGCAGCTGACTTTAGAGACTTTGCCGATCGTAGCGAGCTTCCACCTC
AAACGTTTCGAGCATTCGTCTCAGATCGATCGGAAGATATCCGCCTTCGTATCGTTCCCG
GCTGAGTTAGACATGACTCCGTTTATGTCGTCGCATCGTCGTGCCGTCGACGTGGGCGCG
GCCGAGAACAATAACACCCCGGAAGGAATGTTCGAGGACAACCGCTACTCTCTGTTCGCG
GTGGTCAATCACTTGGGTTCGCTGGACGCAGGGCACTACACCGCATACGTCAGGCAAATG
AAAGGAAGCTGGTTCAAATGCGACGACCACATGATTACTAGGGCGTCACTTCGAGAGGTT
TTAGATAGCGAAGGATATCTTCTGTTTTATCACAAGACTGTGTTGGAGTATGAATGCGAC
GTTTCTTAAAAGCTTTTGTTAGGGAGCTTATTATTACTATTATTCTAAATCATGTATCTG
TCTGATGGTTACGCAGTGTATCCATCGTTTCTTTGACGTTATTGTACGAAGGGAAACGTA
TAACTTTTTGGACATTATGTAAGAAAAAAAAGTCATATTTTCTAGTGATATTAGTACATA
GATGATAAAAAGTCTCGATAATCCTTATATTTAATTTTGCCCTGCAAAATTATTTACGAA
TTTGTTAGTTTGTAAGCTTTAATCTAAACGTACGTAATTTATGTAGTGACTGAAAATTAT
TTGCTAACAGCAAGATATTTATCTGCCGTTACGAGGAACAAATCTTTTATGAATCTTAAA
TAAATTTAGCTTCCTGTTGCGTTTAAAGCAGCTTAAAACAGTCATAGGCACCTATGGTTT
TTAAAGTAACAGTAGTAAAAACATTTTCTGCATAACCTTACCTGTTCAATAAATGTATTT
AAATGTTGTTCAATTGAAGTGTTATTAGTGATAAGGTTCATGTGTGTGTGTATTTGACGC
GGAGAGCGTATCATTCCTAATTTGTTGTGCGAACAAACAATTCAATCTACCTCGCTGTTT
TATCATTTATGGCATTTGATTGGAAGCCTGTATTGTTTTTAAATCACATGTGAGTGTTGC
TTCGTTTTAATGAAATTAATTTTACCCGTATAACATTATGATAACTTCACTATTAGTTTC
TAGTATTTGATTCATTTCCTGAATAGTAAATAATTTAAGTGTTTTATTGTGGCTCATATA
CTACGCATTATTGCTATGTTCCATAACGCCAAGAAGGCACATTAATTTTTTTTTTTTTTG
TGTATCTGGCTTAAACTGGAAATATAGTGTAATGTGAGCGCCGCTAGAACTGGTGTGATC
TTTAATCAGCTCGTGTGTAGAGCACAACGGTGTATAGAGACAAAATGTACAAAGAAGTAA
TTAAGGTCTTGCATAGATATAAGCCGCGCCAATAAAGAAACGAATCGAAAATGGCGTGTA
TGTACCTGCAGTGACAGATGGTAGGGTCAACAAATAAA
(2858 bp)

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