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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR29028_c0_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_116_kDa_U5_small_nuclear_ribonucleoprotein_component_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006412 P translation
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:49.80 TPM:66.33
ORF EntryO_BomoN4EE10840_complete:A_BomoN4EE_TR29028_c0_g1_i1
Sequence
(Nucleotide)
ATTATGTTATTGTTCAGTAATTTTATCAAAACTTTGCACGTAAAATGAAAAACAAATACC
AAAATAATTGTTTGGTAAATTTTATTAAATCAGAAATATAATTAATGAAGTTGTACGTCT
TGTCTTGCCAGCTCCAACAACATAGGATCGTCGAAAAACTTATTGATGGACACGTCCTCA
CTGAGCCCCTTGCGTCGACGGGTCTTGATCATGAACTCTCTGGCTAAATGCGTCGCTGGC
TGTGGTTCCAATGGCCTGATAACAATACTCTTGTCGAGCGGGTCGCCGGGCACGATCTGC
CAGTGATGGAAGACCTGCAGACAGAAGGCCTGGCCCTGCGTGTGCGTGCGCAGGTCGGTC
TCGAAGCCGAACGAGTCTATGGCCGGGACGAACGCTTTGATGGTGTAGAGCGGCGACCCG
GGGACCGGAGCGTCCTGGGTCACGTGACCTCTCCTCTTAGCCAGCACCGTGTAGACGGCG
GATACGCAGTCGGCCGGCGCTTGCACCTCAACAAACAGATACGGCTCCATCAGACGAGGG
GTCGCCATTAGAAATGCTGAATACGCCACGCGTCGCGCCGTGGGGATGATCTGTCCGCCG
CCCCGGTGCAGCGGCTCCTGCGCGATGACAGCATCCAGGATCTTGAATTTCACGTTCCTG
ATGGGCTCCTCACAGAGCGGCCCTTCCCGCGTACCCCACTGGAAGCCTTGAACAATGCTA
TCCTTGACCGAAGCCAGGAGATGCTTGTCCACTTCGGAGGGTAGAGTGTCATCGACTAGA
ATGTTGGGTCCCATCGTGTCGGGACCGAAGGCCCAAATCGAACGGGCAGCCAGAAGATCC
CAATCGTATTTCGTCTGGAAGAATTCTCCTAGCCTCTTCCTGTCCCAGGACACGCAGACC
GCGCCCGTCTCTATGTCCTCGGCGAGACCCCGCTCCAGAGGTTCGGCGATCATCGTCAGT
TTGTTCCTCTTGTTCGGAGTCTCGGCGAAGCATTTCAACGACGACGTCTCGACTACAGTT
TCGCAGAACGACACGACTGGATCAGCAACTTTGATATCAATCTCGGAGTACATATTCCTC
AGATCGTGCATCACGCAGTCCAAATATAGTTCACCGGTTCCCAATATCACGTGTTCCCCT
GACTCCTCCACCCGGGTCGACAGTAGTGGATACGACTTATTTACCTTTCTCAGCCCATCC
AGCATCTTGGGTAGCTCCGAGGGGTTGACCGGCTCGACGGCTATCTTGACGACGGCTTGA
GTGTTGAACCGGAGCGGAGTGAACGTGTGCAGCTCGCAGTCCTCCTCCGCCGACACGACG
GTGCACGTCTTCACTATCGGCTGGTCGATGCCTTCTATGAGGGCCCAGCACCCGGCAGGT
ACGCGGTTCAGTTCCACTTTATATCTAGCCTCATATATCCAGAGCCTTCCGACGTTCATG
ATCCTGGAGTCCTCTTCATCCTGGGAGCTGTAGTTTTCACCCAGGACTCGCACGGTCTGT
CCGGCGTACAGCGTCCCGCTCATGATACGCGCCAGTACCAGGAAGAAGCCGCAGTCGTCG
GTGGGGTACATCTTGGTGGTGTGCGCCACGAGCCGCGCGGACTGGTCGCAGTGCAGCATG
TCTTGACGCAGCTCCCCGCCGGCGCCGCGGTAGCAGTGCGCCACCTTGCGCGCCGCCGCG
TCCAGTGGGGACGGCACGTGCCGGACCGCCATCTCCACGAACCCGCAGAAGTCGCCGAAG
AACCTGCTGCACACGAGGCGGAGTAGCGGACGCACGTTCAGTTTGGCTTCCTGCTTCGTT
AACTTTATACCGAGTTCTGTGAGCACAGCTGGCAGGGTGTCGTCCACGTCTCCCACCACT
TGAGCAAAAATCTTGTACAGCGGCTCCAATATGAACTCCACGAAGCTTCTCTGAGCAGAG
GCATGAGGTTGTTTCTTCGTGAAGCGTCTAGTCTTCGCGTTGAAGTAGACATCGCCCCAC
AGCCAGCCCGCCATGTCGGATGCCCGCAGTCCGCACGCAGGGTACGAGGCAGCGTACATC
GCCGCAAACGATTCCAGAGAGAAACACACGTCGTACAATGTTGACGCGAAGCAGACATTA
CCCAGAAGTGGTGAAAATACAATTGGAGGCTCATCAGGATTATCCTGAGGTTGATTGGTC
TCCAGCATAGAATTCAGCTCATCAATAATATGCCTGAGCTTATAATAGGCATCTGCAGGA
GGTAATTTTAGCTCAAGCATTAGCCTGTCTATTTTGTTGATGCAAAGAGTTAAATGAATT
CTTTCTTGTACTGCATGACGTAACATTCGCTCCGTGTTGAGCATTATACCTTCAGCAGCG
TCCACAAAGAGTACCGCTCCATCCGATATCCGCAAAGCAGCAGTCACCTCATCACTGAAG
TTCACGTGACCTGGAGTATCCATGATATTCAATAAATGTGACTTTCCCTTTATATCCTTC
AATAGCAATGTTACCGGCATGGACTTTATCGACACTCCTCGCTCTTGCTCCACAAACAGA
GTATCTGTATACCTTATAGGTATTGTTGTCTCATTGTTAATTGTTCCAGGATGTGTCTGT
CTCATGAGACAGTCTACAAAAGATGTTTTTCCATTGTGCAAGTGGCCCATTAACGTAATA
TTTCTGATTAAGTTAGTATTATCTAACATGTCAGCCATGTACTCCATGTCGTAGGTGGTC
TCTGGTAGCTGCTGTTCTTGAACCTGGAACTTCTTGTGTTTCACAGGCTCTACCAGGGGT
TTGTCGAGAGCCTGTGTATCTTCTTCTTGGACGACTGTCTCTACGTCGGGTCCATACACT
TCTACAGCTTGAGGATAGTAACGTTTGTCCTCATGAAGAACGACGGACATAGGCGCAACT
TCGGGCTCCGCGTCTGCGTCCTCGTCCTCCTCCATTGCTTCCTCATCACCTTCACGATTA
TCCTGACCATATACACTCTGTTCGTCTTCAGAATCAGACTCCAAGTCTGGCCCGATGTAG
TTTCCAAATTCGTCATATAAATCTCCGTCCATTTTTAATATTGATAACTATATTTTGAAA
ATATTTCCGAAAAATAATTATCCAAAACAACTGCCGATGCTCTAAAGATTGTTTTGAACA
AGTTTTGACTTTGACAGCAAGATAACCTTAAAATCTGGTTTCATTTCTAAACGAAAATAA
ACGAA
(3185 bp)

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