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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28675_c0_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SINA-like_10_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:19.76 TPM:26.32
ORF EntryO_BomoN4EE10782_complete:A_BomoN4EE_TR28675_c0_g1_i1
Sequence
(Nucleotide)
TTTTTAACCTTATCAAAATAACATTTATTTGTCTTACTTTGTTACTAGTTAAAACATCTT
AAATATATTTAATACTAATTTAATGTACATCAGTCATAGTAGGCCAATGCCAAATATTTC
TAAATGGGCTATATTATATTCATTGTAAAAATATGTAACCATTTTAAAAAAAAACTACAC
GGAATGAGACCATCATTAGTCTAATGAGACCGTTTTCTAAGAACACAAAGTTTAGATTAA
AACAATTACAATACGTAACCAATTTTCTGTAGACTGTAGTAATGTTATGTAACAAAGGAA
ATTAATTGAATTTACATTTTAATGTGAACTCAAATATTACAAAGAGCTGGATAATATGGA
GTTAGCAAAGTTTATTGGATAAGTTTTTATTGGATAGATACGGCTATATCAAGGATTGAA
TTCAATACTGTGGATGTTTGATTTAATAGGATCAGAGTTAAAGTTAAACATTACTCGTAT
GATCCGAAATTTTTGAGTCATCGTTGGTATATCTGAAAAATTTTTCACCTAAATTATTGG
CTTATATTCTAAATCTACAAATAATTCGCTACGTCGATTCACGACAATCTTTCCTTAGCA
TATCTGTATCTGATTTTCCGATGTTTACGTGTATCGTGATAGCTTCATCGTTTTCAGCTT
TCATGATCACATCGCTCCATTGCACTTCAGCTTTTTTCCCGTAAGCCTCGTTTTCTATTA
AAATGGCCGATTTAGTACTCAGCGCTTTACTTTGGAATTCTACTAAAGCGCAGTATTCGC
TTTTTTTCGTTTCCGATTTAACATCGGCAATATAACCTAGCTTCCTCCTCATAACTTCAA
CTTTGACGTGGTAATTGTAAATGCATACTTTGATTACGAAAGCGCTTTTCTGATGCAGCA
GTATTATTTTATATTTCGTTCGACAGCAAGCTGTCTTCTTCAGTTTCGTTTGGAAGTTTT
CTATTAATATTTTTATCTTCTGCGAGTATACCGCAATGATGTTGTGCGTGGACTGAAGGT
GACTGGAGAGTTCTTCGAATGGAACCGAGCAACAGTTCGCGGTGATGGGACACATCATCG
TATCAAACTTACACTCTTCTTCGTGTTTGACTCTTGTGATTGCTGTCAGTAGTTCTGTGC
AACCGCGTCTGTAATTCCTGCACGGTAACATCAGATCGTTGACGAGCCTTTGAAGTGCTA
GACAGGGCGCTGCCGGTGCCCTCAAAGAACCTCGGCACCATGCACACCTTGACATGCGTC
GTGAGCACCGCGCGCACCACACACCCCCGCACCACGGGCAAACGCACGGCCCACAGCACT
GTAAGGGTTCTAAACAAATACTGCATTCAGAGAATCTGGATAGAAGTTCATCGCAGTTCG
GACAAGTGCACTGGGCTGCGTGACCTTCTTCTGAAGTTACTAATGCTGGAGGTCCTACGA
TGGGCAGGGTTTTGTCTTCAATTTCGACATTCTCTCCACTGGACGAATCTGAGCCGTCGT
CTTCAATTTTCTTTTCTGTTACTATCGTGACGCTGTTCTCGCCACAATCATTGTTCTGAG
ATCTCTTCTCCGTCACAGAGTGGAACAGTCCTTGTATTCTCGGAAACATTGTCAACAAAA
ATACTTCACTGAACACCGAAACAAAATAATCATTCACTTGAAAACACGTTTTATGTAAAC
ACATACACTTGCATCACAAATGGGGAACTGTCATTTTATTATGAAATAACTCGCAGCTGT
ACAAGGCTTAGTTTGATACGTGCGCTTGCGTCGGTCTGTCGGAGTCTTGTGAGGTTGTGG
CGACGGCGCATCGCTCTGAGGGACCTACATACGCCTGAACTATGGTGATTCACCTACCTG
AGTGGGCGTCAGGGGGTATGCCTTCG
(1886 bp)

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