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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28456_c0_g5_i6
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_arf-GAP_with_coiled-coil,_ANK_repeat_and_PH_domain-containing_protein_2_[Bombyx_mori]
Ontology
GO:0005096 F GTPase activator activity
GO:0005768 C endosome
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0036010 P protein localization to endosome
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
GO:1990090 P cellular response to nerve growth factor stimulus
Transcript
Level		FPKM:0.39 TPM:0.52
ORF EntryO_BomoN4EE10753_complete:A_BomoN4EE_TR28456_c0_g5_i6
Sequence
(Nucleotide)
TATCGACGTACGTCAAACCTATTCATGATCCTTTTGCATCGTGCATCGTGCATGGCCTTG
GCGGGACGTACAGCAAGATGGATCGTGAATAAGGCGCTTTACATCCAGCACCGCGGCCTT
GAGCTGACGTACAGCCGTGATGGATCGTGAATAAAGCGCTTAAGCCGGAACGCACGAGAG
GTGGGAAATAGAAAATAGTCTGTGACACGGGACTTTTTTAACGCCGAAAACCCCAAAGTA
ATAAACATTTTCCAAATAATATATGACCTAAATGGTCTATGTTACCAGGTCTTATAATTA
AAAAAAACAACTTAGTGCATAGATTAAACACATATTATTAGTGTTTAACTCAAATCAGTT
GCACAACTGATTAATTGAAATCTGAGGAGAAATATTGTGAATACTTAGCGCTATTTAATG
TGAAATATATAAAAAAAGAACGACAAATTATTGATAAAATGAAACCGTTGATTGATTTTG
ATGAGTGCCTTAGGGACTCTCCAAAGTTCAGAGAGCAATTAGAAACCGAAGAAGCAAATA
TTGATGGGCTGGAACAAAAGCTAGATAAGGTACTGAAAGCTTGCAGCATAATGATAGAAA
CGGGAAAGACTTATATGAATCACAGAGGTACCTTCACAAATGCACTATGGGATTTGACCG
GAAGTTTCTCAGAAGACCCAACAGTTATGGCACCACTGAACCGTATGGCACATGCTCTGC
AGGAGATGACCAAGTTTCATTCAATACTGCTGGACCAGGTTTCCCGAACTGTGATAAAGA
ATCTCACTGCATTTATAAGGGTGGATATCAAAGGAGTGAAGGAGAGCAAACATCATTTTG
ATAAAATCTCGAATGATCTTGATTTAGCTTTAATTAGAAATTCTCAGGTATCTCGTCATA
AGTCCGCCGATGTAGAGGAGGTAGTGAATCTCTTGCTCGCGACAAGGTCGTGCTTCCGTC
ACACAGCACTCGATCATGTACAGAAGATCACAATGTTGCAGGCCAGAAAACGACACGAGA
TATTGGCGACGTTTCTGTCGTATTTACAAGCGTGCTGCACTTACTATCACCAAGGCGCCG
ATCTGACAGAGGACCTGGAGCCGTTTCTCAAGTCAACGGCAGATGAGATAACAACAATGC
GTAACGATACAAAAATATTAGACAAAGAGATGGAGAATCGTCATACGATTGTAAACAGTA
AAGACACAGTGTTGCCAAGCTGTAAAACAAATTCCGAAGGCGATTCAAAAGAGGGTTTGT
TGAGTACGCCTTGCCTCAAAAATCTGCCTAGGATGCAAGGCTACTTGTTCAAGCGGACAT
CGAACGCTTTCAAGACTTGGAACAGAAGATGGTTTTATCTATATGACAACAGACTTGTTT
ACAGAAAAAGAACGGGCGAATTGAATGTAACGGTGATGGAAGAAGACCTAAGGTTATGTA
CTGTGAAGCCGGTTCACGACGGCGAACGAAGATTCTGTTTCGAAGTATTGTCGCCATCTA
AAAGTCACATGCTCCAAGCGGACTCCGAGGAGATGTTGAGCTGCTGGATAGCGGCGCTGC
AGAGCGGCATCCGCTCGGCGATACAGCAGGGCCAGAGCCGAGAGAACCCGGAGTCGCAGC
TAGTACTCGTGCCGGACGACACGAGGCTCAGCGACACCAGACGGAACACGACCAGTGTCG
CCATGAAGAAAGTTAGGATTTGGGAGCAACTTCTGAGCATTCCCGGGAACAATTATTGTT
GCGATTGCGGTAGTCCGAACCCGCGGTGGGCGAGCATTAACCTCGGCATTACACTATGTA
TAGAATGTTCGGGCATACATCGGTCGCTGGGCGTGCACGTCAGTAAAGTCAGGTCTCTGA
CGCTCGATGACTGGGAACCGGAAATTATAAAGGTAATGGCCGAACTAGGGAACAAATTAG
TGAATTTAATATATGAAGCTAACACAGAGGGCGCGACTGTTGCCAGAGCGACGCCGGATT
GTGAAACTTGTGTTCGCGAAGCGTGGATCCGTGCTAAGTACGTCTCGCTGATGTTTGTAC
GAGAGCTCGTGAACTTTGATGCCCTCGAACAGTCTCCTCTCAAGTCCGGCAGACGCTGGT
CCGTTAGAAGAGCTCGACGAAGAGTGCGTGTCCCGCCTTCCGTCCCAGATACAATTAGCG
ATGAGAAAAGCGATGTTAACAGCGATATGAGCGTATCAGAAAGTTCAACGAAATCAGACG
GAAGTCCAGTGCTGTTGATCGGGAAGGAGTTGGCGAGCGAACGCGACGTGGATCTCAGTT
TGCCCTCGGATCACGATTCTACAGAGGGAGAGGACGGAGAGCTCGACGCGGAGGGCATGG
AGCGGCTGAGCCCGGCGGCGGTGCTGTGCCGCGCGGCGCGTGCGCACAACGTGCCCGTGC
TGCGCGCCGCGCTGCTCGCCGCCGACGTCAACGTGGCCGCGCACGACGGCCGCACGCCGC
TGCACCACGCCGTGCTCAGCGGCTCGGTGATGGCGTGCTCGTTCCTGTTGCTGAACGGAA
GCAAGCTGAACGTGCAAGATGAAGATGGGAAGACTCCCTTGCATCTCGCCACGGAAGCAG
GACACACCGGACAGGTTTGCCTTCTCCTGCGGTATCGCGCCGACCAATCGATACGTGACA
AGGACGGACGATCACCGCTCGACATCGCCGTGGAACACGCCAACGCCGATATTGTTACTC
TGCTACGGCTGACGAAGCTGAACGAGGAGATGCGCGAGAGCGAGATGAGCTCTAACGACG
ACACGTACAACGAGGTGTTCCGCGACTACACGCAGCTCGCGCACTCGCACCCCGAGCGGC
TCGTGCGCGCCCGCAACAACAACTGCGAACACAACAGTGAGCAGTCGACTGAATGACGTC
ACCCGAACATCGCTCGGCGACGGTGGCTGCTGTGGCCTCACAAGCACTGAAAGGTTTTTC
CGATCGTAGGCGAATTCTTTGTTGACAACCCTAGGACCGTTGCTCACCAAAGGAATCGTA
GTGGGGATGAGTTAAATGAAAAACATATATAAACATACATGTACGTGAATACCTACATGC
TGCGTATACACACGTTTAGTTATTAGCTATCTTATCTTATCTTAGTTTATTTGCTATCGT
GATTGATTGAGTTACCTAGAGAAAAAAAAACTGATGACGTCAAAATATGTCTCCCAGCGC
TGTGTTGTGAATTTTGAATGTTTTTAAACAGATTTTAAGGCCTAATTGTTTTATTAAATA
AAATAAAAAAAAACATAATTGGTAATTGATAATATTTTATTGGGCAGGTTTTATAAAATC
GTAATCTATTAAAATTTTGAAAATAAATTTTTTACATGTGTTTTGTTGCTTCTTAAAAAT
CAATACGATATCAATATAGAATAATTTAGTAAAAACATTTTTTCAACAGAATCGGCGCAT
TTGAAAAGCTTTTGATTAGGAACTTTTTAGGAATAAAATTTTTGATACGGCTTTACAATA
AAAATTTAAAGAATACAAATTTTATACATTCTTTTTTAATTTAAACGACTGCGGCTTAGT
TTCCTTTGCGTCGTAACAAACAAAAAAAATTTTTTTTTTAATGTTACCACTTGAGACAGT
CGGACAAACAAGTTTTTAATCTCACATACTCATGGTCCACCGCCACGGTCAAAATCTCTA
(3660 bp)

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