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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28434_c2_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_patj_homolog_[Papilio_machaon]
Ontology
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
Transcript
Level		FPKM:5.06 TPM:6.74
ORF EntryO_BomoN4EE10482_complete:A_BomoN4EE_TR28434_c2_g1_i1
Sequence
(Nucleotide)
CTCCGATTCAGCAAGTATGTAAATGTCATTTTATTTATAAATTTAAATTGTTATTTTTCG
TTACAAACAACGTGAGCTAATTTTTCTCACGTTCGGCTTCGAGATTTAAGTAAATTAGAT
TTAGAACCCAAACGGTATGCGTTCCCCGGAGTTTTATAACCTCAGCGGGAGAGCTGTGTG
TATCACGTAACATCGCGGGCGTGTAGTGTGATGGTGAGGCGAACCGCGATGGTTCTAAGT
ACCGAATGGGCACAAGTTGAAGTTGTCGAGCTCACTAATGATGGCAACGGCTTGGGTTTC
AACCTAGTCGGCGGCAGGAGTACCGGCGTCGTGATAAAATACGTACTGCCAGGAGGTGTG
GCTGACAAGGACAGGCGACTGCAAAGCGGTGATCACGTGCTGCAGGTGGGCTCCGTAAAC
CTGCGCGGCTTCACATCGGAGCAGGTGGCTGCTGTATTGAGGCAGGCGGGACCAGTAGTC
CGTTTGTTAGTCGCGCGCCCAGCGGATCCTGCGACCGCTCTCCGTGCCCCGCAACCCGGC
ACAGCGCTCGTGCCGACCAAAATCCTTGCTGATCCGGAGCTTCTCGACCGTCATCTCATC
GAAACTGGTTACGGTGCAGTGTATGACTTATCTCAATGTTACAGTGACTATAATATCAAT
GGGCAAAATGGCGAAACGGAAACTAGTATAGTGGCAGCAGCGGTTAGTGTTATTGGTGAC
AATCCACAGAAAATACCTGATCATCCCATTGTATGTGATTCTGTGTCACCAACCATCACT
ATCACTGTTCCAGTAGAGTTACCTGAAATTGAAATTATTCATGTGGATTTAAATAAGAAT
GTGTATGGACTAGGTATCACGGTAGCGGGGTATGTGTGTGAAAAAGAGGAGCTCTCTGGA
ATATTTGTTAAAAGTATAATCGAGGGTAGCAGTGCTGAACAAAGTGGTAAAATTAAAATT
AATGATAGAATTATTGAAGTGGATGGTATATCATTAGCCGATAAGAGTAATCCCCAGTCT
GTGGAGATATTGAGGAACACAGGTATTTCTGTTCACTTAGTTTTAGAGAGATATCTTCGA
GGTCCAAAATTTGAACATCTACAACTAGCTATATTTAACGAGGAGCGGCCAACTTCACCA
TCACCCTCCACCACTACACTTTCTTGGTTCCCAGTGCCTTCTCAACTCGAAAATAGTATA
ACAGAAATAGAACCTGAACCAGAATCAAATACTACAATTGATTCCAGCGTCTTAGAGGTG
GGAGATCTTCAGGAGCCCACACAAGAAGAGCTGGACCAAAGATTTGATGAAATACTTGCT
GTTGACAAAGAGGACATTGTAAAGAAGTGGAAAGAAGAAATTGGATCTGACAAAGAAATA
TTAGTGGCTGAAATAAAAAAGTTAGAAGGACTAGGGATCAGCCTTGAAGGAACTGTGGAT
GTGGAAGGAGGGCAAGAGTTGAGACCTCATCACTACATTAGGTCTGTGCTTCCAGATGGG
CCTGTTGGACTGCAGGGTGTACTAAATGCTGGTGATGAACTGCTCGAAGTCAATGAATAT
AGATTACATGGCTTAACACATTCGGAAGTTGTAAACATTCTAAAGCAACTACCAGACAGA
GTAAGATTGGTATGTGCACGTAACAGCGTCGACAGTGGACCACGCCCTGTTGTAAACTTA
GCATCAGATCGAGAAGGGTTTGAAGCGAGGAAAATTATATCCGGAAGCCTAAACAACCTC
ACAACATTAGTAAAAGCACAATCAGATACATCTATAAACACATCAAGTACAGCAACACTG
ACTAATCACTCAGAGCAGTCTAAGAAATCCCGATCTCTTGAGTGTGTGTCTGGTTTAGCC
ATGTGGCAGAGCAAAGAGGATATTGTGATGCTTGTCAAAGCTGATCAGGGACTCGGCTTT
TCAATATTAGATTACCAAGATCCAGTAGATCCAAATGGAACAGTCATTGTCGTTAGGAGT
TTAGTACCCGGCGGAGTTGCAGAGAAGAATGGTGAAATATCACCAGGAGACAGGGTAATG
TCCGTGAACGGAGTCAGCATACAAAATGCGACATTAGACCAAGCTGTTCAGGCTCTCAAA
GGTGCTCCGAGGGGGACAGTCAAAGTAGGAATTGCGAGACCCTTGCCACCTCAAGACTCC
TCAAAGTCCAAGGGTACAATTAATGTTAACAAAGCAAGCTGAATCTGAGAGTAACAATAT
AAAAACTATGCTAGTCAAATATTGAGTCATATCTGTACTATTAAGATAAACAGTCCATAA
TATTCAGAACAGCAAGGAAAAAATTCTTTGAACTGAGAAAACTATATTAAAAATAATTTA
ATTTAGCTAAAACATTACTTAGAAGTGATTGTTCCTTCACATTCTAATAATTATATAACT
TGCAGAAAGACAGCAAACATGCATGTAGCAGGTACCATTTATTCTTCTATTATGAATTAT
GTTTTCTTTTCATTTGTTTCTGTTAGAAGTTAAACATAATTTTAACAAAGTAAAAAACTA
TTATTGACCGGATTCATGCAGGTTTGTATTACAGGTATTTTACCCAGCAGAGGGTTGGCA
AGTTTAGCTTTAAAAATTTAGTGAGATATTGTCTGTTCGAAGAATCAATGTTCTCAATTT
CACAATCAAAATGTTAAGTAACATATAACTAATTAAATATGAACATTCACATTCTGTAGT
GAATTCACATTTCCTGAAACTACTCTTCCACCTTGTACTGTATGTAGAGGGAACTATAGT
AGAAACCTTCCTTCGACTGTCAGTATCAACTACACTAAGTTTCATCACAATCACATGAGT
GCCCTAAGAATGTACCGAGAACAAACACATAAATTTTTACTATGTATCAATAGCTTGCTT
CTCGTAAAACAAATTAGATTGGATCCAGAGTAAGTTAACAAAGTATTTGAGTGAAAAGAA
CGAATAATGGAAATGTTTTAGCTAAATTTTTAAGAAAAATTAAGGCACATTAGTTTTAGT
ATAGTACACTCACAGTGCGGAATGAGCTCAAAGTATTTTATAAACAATAAAAACTACGCT
TTACTAGTTAAATATAAGGTTATATTTTATATAAGGAACAAACAACACATCACTTTTTAC
TGCACAGTTTAAAAGAATAAGAAAATAAAAATAATTTTTGTACAAATTTTTCAATTTACA
TTTTTTTTTTGGTCTTGTTTTATGTACAAATCAAAATGATTAATTGTAAGACTTGATGGA
ACAGAGAGAGATTGTATATTGTTGCAGTAATAGTAAGAAGTAAAAGTGCCGACAGTAACA
AAAAAAACTCTTGTAATAGATATAATAAAAGTTTATATCGCACAGTTGGTGATCTCTGAT
TCTTTAGTCAGGAGGAATTCGCCGGTCTTACGCGTAGGGATTGAGGGCGATAGGCGAGGC
ATGATTCAATCAACTAAAACCCTTTTCATCATTCAGCTTATTGATCGATCTGCGCTCGAG
CATCCGAGAAGCCATAGCAAGGTAGAGGCGTCCCTGTTAAAGAGAACGGTTTTTGGTAGA
CATTTCAGTTGCTATCCTTCTTCAAGATATCTATGAGGAACCATTTGGCTTGTAGGCAGA
TTTAGGCAGTATTTAGGCAGTAGGCAGATTTCACTCCAAGGGTCCTTAAATATGACGACA
AAACCGTTATGAAAACGTCTAAAGTCTATCTCCGTTGTTGATCGTAACGATAACGTCGAA
TGAAGAATTTTATGTTGCATGTCAATAATGGTACTTGAAAAAATCAAAATCGTCTATCTA
TTTAACGAGTTCGAACGAAGCACGTTGCTCGCGAATAGAAGTCCATCATAAGACGTGCTC
GAAGAACCTTCAATCCGGACTGGGCAGGAAATTGGAAGGTCGCAAAAAACATTGGCCAAG
GGTTGTTTCAAATTGCAAAATTTAATAAACTCTAATAGGACCTAACCAAATGTAATAATT
ACGACGCTTGACATGAATTTGCTGAGTTATTTATTCCAGTGGAAAGGCGCTGCAGCGACT
AGCTATCGTTGAAATTACGTCAAATTTCTCTTTTTATTTATTTAGAGATGGGTGGACAAG
ATCACCACCTGGTGTTAAGTGGTTATCGGAGTCCATAGACATCTACAACGTAAATGCCGC
CTCCACCTTGAATTCTAAGGTCTCAGTATAGTTAGAATTCGAATGACAATTCTATTTTTT
TTTAAAATCAGTATTGGACAAGAAACGAAGTTTCACTGTTGGCACTTTATTCTTTGCTTC
ATTGCCGTTCCGTGTTCATTATATACCTACCAGATAAACTCAAATTTACCTAGGTAACTT
GTTCAGCCTCACGGTATTAGTTTTTTTGCCGTGCGTGCGCGCGCCCAGCAAGAAGCTCTC
CCCGTATAATGTTTTGACGACAGAGAAAGCTTTAACAGTTTTAAGTTGGAGGAAGCTTCG
CGAAAATGCTGCCCCGTTATCGCACGACAACTGGACAAACAAATAAATACTAAGAAAAAC
AGCATTTTTAGTTTTGTTATATCTAAAACGTTGCTTCCCCATTAAGATATAGAGAAAACC
GAAGGGAACAAATTATACAAAAAAGAAAAAACAATTTGGGATTTGATCGTAATATGAATT
GAATTTGCATTCGTTTACCTGGAAGTGAATCGTCTGTGTTGTGTTTCATATAAACTGGTG
CTATAATTTTGTTATATATCTTGTGTTTTTTATATACGTACTTATTGTAAAAATAATTTC
ATTGACATAAAACGGTCTTTCCACATCGATCACGAAAGCTTAAAAAGAGCTTTTTAGCAA
CTTCCAAAAGGTTTAATTATGTTGAATAACCTCCTGTAAACTTTCCGCGGATTGTACCAG
AAATATCCAATGAACATTCTGTATTGTGATAATTTTCCATAATTCAAATAGGCATTGTTG
AATCTCGATTTGTATTTTTTTTTTAATTCATCGAATGATCTGTCAATTTGTATTGTACAA
TTTTATTATAAATTATCTAGTATTAGTAAAACTAAACTAGGTCTATGATGAAAGCAGAAA
TGTGTCGATGAGTCTATAGATGCTATTTAGAGTCCGATGATTTATTCTCCAATGCGTAAG
TGTAAATCGAGAGAAATACCATCTTTAGTCTAAAATATCAAAATTCATTTATCAAAACTG
GCTGTGGCGTTATAAAAATAAATGTACATAAAATATAAATTAATATAGATACGTAGAACA
TTCTTGATGACCAAAAAACTTAGTAGTTCACGAATCACGACCTTATCTCGATCGACACAA
GGTCGTCGATGCACCCTAATGTACCTTATGGCCTTTTAGAATTAAAAGTTATTGTAAAAA
TATTGGCTTATTTTTTACATAAACTAAGCGATCTTTTAGTATCTTTTACATTAGAAAAAA
AGATGAAAAATATACACAAACGAATGTTCAAATATCGGGCGCCTTTTTTTTCAATTCGGA
AACAAAATATTTTTCGTTGGTCATTTAATCCGATCCGCCATTTTGCATGAAAAGTTCTCA
ACAAGGGGGCGGGAAAACGAAAACGTCAAAATTTTAACTCGTTTAGGTATTCCCGAAAGA
TAAAACTTTCAGCAAAAGTTGAATATATTTAAGTCGGTTTTGTTCGTCCCCGTGTATGTA
CATTTATTATAAATGACATTCTCGCTTTATTCAACACTTACGTTTTTCATACCGTTAATA
TACAGAACATATTAATGGCGCAAAATCGATCAAAAAGTATCTTGTTGAGAATATTTCAAG
TATTCATAAAATCTTCCTTTCTCCATAGACTGAAATGTAACTAAATTAATAATCAATCGG
AAATGTGTGCTGCAAGATTTCCTTTATATGTTGTATTTTTTATTTATTTATTTATTGATT
TAGTTGCACCAACAAACATGACAGATGTCACCTCA
(5915 bp)

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