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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28426_c0_g1_i1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		cadherin-like_membrane_protein_precursor_[Bombyx_mori]
Ontology
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001822 P kidney development
GO:0003007 P heart morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0007009 P plasma membrane organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0022008 P neurogenesis
GO:0035329 P hippo signaling
GO:0043931 P ossification involved in bone maturation
GO:0045177 C apical part of cell
GO:0048565 P digestive tract development
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0070062 C extracellular exosome
GO:0072307 P regulation of metanephric nephron tubule epithelial cell differentiation
Transcript
Level		FPKM:0.60 TPM:0.80
ORF EntryO_BomoN4EE10422_complete:A_BomoN4EE_TR28426_c0_g1_i1
Sequence
(Nucleotide)
TTGTATAAATATTTACAAATAAATTGAGTAACAAAAGTATCACTTTGTAAGTTGGCATAT
CTCTTTTTTGTAAAGTGAGTAGGTATACATTTGTAGAATCCGTAAAAAAAACTTTAGTAC
AAACTGAATTTCAGTTTCATTATTTAAATTTATTTCTGGAATTGATTTGCAAATTCCGGA
CTGAAGGGTGTTGACTTGAAGCCGAAATTGTTGTTGTGTGTTGCCACTATGTCTTCGGGC
TTATCTGTTTTAAATTCATCGACGTCACGAGGAAAATAATTATTTTCGCCGAAGTGTGGC
AGATCTTCAATGCCGATTAGATCAGAGTCGTTCGATGCATCGCTCATAGAATCGAAGTCC
GGGGCTTTAATGGTCTCGTTCCAGATCGGATTGGAGCCTTCCACGGCATGTTTATTGGTG
CCCGGCGCCGCGATACCGACGCGGTTCAAACCTGAATCCACCGATCCGTACTTCTTAACC
GTCAGGGCTTCCAAACGACGGTTAAGTTTTTTAGTCCTGATGATGAAGATGACTAGCAGT
AGGAGACAGAGCGCAGCCAGCAGGGCTGAGAGGACCGCCAGCGCGTACAGCACCGCGGCC
GAGCCCGCGTCCGGCGCCGGACTGGTGTCCGTGAAGAGGTCGCGCAGCACTAGCAGCCGC
GTCGCCAGCGTGGACTGGATGGCAGTCAGCAGCACCATGTCCCCTCGGAGAGTCTCGATC
TCGTCGGCAGGTACGGGCACATTATCGCGGATGAAGTGTCCCCTCACTTCGGTGATGCCG
TTCATGATGACCCCGCTGGCGTCAGTGGCCGGCACGACTTGGTCGATGTTACACGTCATC
TCGAAGCCGGCGGAAAACGTTTGTGCTATGAAGTCAGTGTTCTGCTCGACTTGTTCTAAA
GTGTTAACAAACAAGAAGAAGACGCGGTTCCTTGTGGAGATCAAGTAGATCTTGACATTT
GCTCTATCACTGTAGCCAGCTGGATCCGTAGCCACGACTTGGAATTCGAACATTCCGTGC
ATGGACGCAGTGGGCTGGATGTTAAGAGTCAGTACACCGGTATGTGGGTTAAGTATGAAG
GCTGTCTCCCTGACGGAGGCCAGGGTAGGATCAGTTACCATCGTCGACCAGTCTATCGTG
TAGATTATCGGTGCATTTTCTGAATGTGTCGCCTGTAAAATCAACAGTTCTCTTTTGATT
GAATCCGAAGTGGAAATGCCAGCCGTGTACAAATCTCTGACGAAGTACGGCTGGGGATCT
GCCTCTCTCACATTAACGGTGATGGTTATTGTAGAGGTTAGAGCGATTCCGCCTGTCGGT
GAGTTGCTGGCAGCGATCGTCAATGTATACGTTTCGCTGACACTCCGATCCAATTCCTTT
ACCAGGAATAGAACGTTCGTAGTTTCGTCGAGTCCAAAGTGGCCGTCATTATTTCCATCA
ATAATCCTGTAGTAGATATTGTGACAATCATCACTGCAAAGATGGTTTTTCCGATCCTCA
GCACGCGGCAGCTCATGACGTTCCAAAAGGCCCGCTTCTTTTTCAATGAAAGCAACAGTG
TGAGTCGACGTGGGGAAGATAGGTTCTCCTTGTATCGGCACGAACACCACACTGAAGGTG
CAGTCCGTGGAGAGCGGTCTTGGTTCTGTCCCGCCGTCAGTAGCACGTATCGTCACCTCA
AATTCTCTTATGTCCTCGGGGAAGAGTTGTTTCAGCATCACAGTGCCACTGTTCTCCCCG
TCGTTGACAATGTGGAAATAATCGACGGCTTCAGTATCACCAACCACTTCGAAGGCAACT
TGTCCAGCATGTAGCCCGTCTTCATCGGTAGCGACGATGCGGTTAAGGAATTCACCATCC
ACTGTTGCCAGCAAACCGTTGACGACAGCCCTCTCCCTGGCCAGTCGAAGAGTAGCTCCG
TGTTTAGGAAACACAAAAACAGGAGCGTGGAAGTTGTAAGGACGAATCACGAGCTCGTAC
GTTTCATTGGACATCTGTTGCGGGATGCCGTGGTCGTAGGCTTTAATATGAATAGCATAA
GTTCCCCAATAGCCTCTCAAGTCCATGGCGGTTTCCAGTTCTCCTGTGACGTTTTGTATC
TGTATCATGGTGAAAAGCTCTGGGACTTCGATTTCCCTGTTGGCGATCGTGAGGCTGATG
ATGGCGTATCCGACCCGAGAGTTGTCCGTGTCAGGTTCGTCTCTATCAGGTGCGTATATG
TGTGGCTGGAGACGCGTACCCTTAGTTAAACTTTCAGACACCGACCATGACAGTTCATCG
GGTTCTGGAAGCTCTGGAGCATTGTCGTTCACATCAAGAAGTACGACCAGTACTTCGGCA
TCATTTTGGTTTCTGTTGCCGTCTCCTTGCTGGAAGAAGTTATCGATGAGGTTAAAGAAG
ATCCTGTGTTGAGGTTCGTCCCCGTCCCGGTCGAGGACCTCGTCGGTGGTGTAGTAGACG
TACACTCTTCCCGTATCCGGATCAACAGCGAAGAAGTCGCGCAGACGAGGATTCACGGCG
TAGTTGATTTGGTAACGAATTGTGTGGTAAATATCATCTCTATCCAAATCGCTACCAATA
ACTTTGACAACCTCATCTCCAGACACAGCATCTTCGTAAATATACACGACCGCCTTAAAT
TGGTCTGTTTCAGGTTGAGGTATTTTGTTGTTGGTATCTATGATTTGTATCACGACTTGG
CCGGGAGTTTCCCAATAAGTCGGGTCGTCAGGGCAATCGTCTGGGTCTTCAGCGTAGCAC
CGATCAGTGGCCACCACAGTGTAGTATAGGTTGTATCTCCGTGGAACATCAGCATCTATT
GCGCCGCTTGTTTTCACCGTGATCTGACCAGTGTAGAAGTCGATCATCAATAGATTCTCT
GGTGTGCCTTCGTTTGCCTTCATAGTGTATCGCACTTGATTGTAGAGTGGTCCGTCGATG
TCAGTGGCCGTCAGAGTCCCAATCACGACACCGGCGTCTGACATTTCCCGAACACGCAGC
GACTGCTCCAGTGTTCCCGGGACCCATATCGGAGGATTATCGTTCATATCGATGATTGTG
ATGGTGAAGGTTGATTCATCATAATCATCCCCGATAACAGTGTTAAGGTCCCGCACTCTG
ACCGTCAGATACAACATCTCGAACTCTTCGTAGTCAATTGTGACGTTCTCCCTGATTTTT
TTGACGACGAGGCGTCCTATAGCCGAGCCACGGTTGTTGATCGCAGGATATATTGTTTCG
ATCTCGACACAATTGTGAAATTCAATAGGATTAGCTTCCCTGCCTTGTTTGGTTGCGTAG
GAAGTGGTCCAGTCGATTTCGAAGCGCAGTTCAGCCGTAGTGTCAGGATCGGTGGCTCGG
ATCTCACTTGTGATGATGTAGCCTTCGGGGACATTCTCTTCGACATTAGGACTGCCGCGC
GGCAATCTCAGAGTAGGAGGGGTGTTGTTTATATCTTCCAGATGGATCAGCAGCTGAGAA
GTCGCCGTGTGAAATGGTTCCCCCAGGGTGTCGTCAGCTCTGACCTGAACAAAAAGTTCG
CTTTGTCGGTGATAGTCAAAGAAGTCGTCCTGCGTGACATGAATGTCCCCTGTGTCCTTA
TCTATCGAGAGATAATTATTCGCGTTTCCCATTAATGTGTGTTCAACTCTGTCATCAATG
TCTCTGTCGTGGGCTCTTACATTAGCCACGAAAAATCCCTTCCCTTCAGTTTCCTTGAAG
GAAACGTTTTGTACGCTATGTTCAAAAATAGGCTCTTCATCATTCCAGTTAATAAGATTG
ATGTACACATACGCAACCCCGACGTGTTCTTCATTGTCCATGTCTGTTGCTATTACCCGC
AACCTGATCCGTTGAAATTCTGGAACTTCATAATCGAGCATTTTATGGTTAGCTGTCCCC
ATGATGAAGGTCTGTCGCTGATAGCCAACTTCGGGTGCTATGTAAAAGGCTTTCGCCACG
TCTGGTGGATAATCGCTCTCTAGCCTCACGGTGTATTGTGCGTTTTGACCCAGATCTCTA
TCATGGAATCCGAATTCCTGATCGAAGTTCAACGTCAAAGCTGTCTCTTCCATTATGTTC
AAACGATACTCTTTGAACAAAGGTTCTGGTCTTTGGTCGTTTATATCGTTGACTATTATG
ACAACGTTGGCTGCCGTAGCTGAAGATTCGTTGTCGTATTTATACGCGATTATGGATAAT
TGAAACACTTCTCTTTGTAATGTGTCCCTGTCTATTGGATCTACGTATAATATGGCGCCG
CTACGACCCCCCTCGATGGTGCGAATGTGAAAAAACGTATCTTCTTCTGCTGTTTCCAGT
CTGTAGTGGATAGGTTTGTTGATGCCTGTATCTCCGTCGATAGCTCTTACAGGGAAGCTC
TGAGCAGTTTTCTCATCGAATTGTTGTACAGCGAAGATCTCTACCCATCGAGGCGGCCGA
TGTTCCACATTCTCTACTTGGACCATAAGCGTCACAGTGTGAGTGTTTGGGAGAGAGTCC
AAAGCGGTCACAGAGAATATATGTAGTGGATTAGTCTCGAAATTTAACGGTTCATTGATG
CCAACGGTCATTGTCATTCGGATCCATTCGCCCGGAATGTTTGCCCCTTGGATGTAGAAG
ATCTTGTCGTCTCCTCGATCGCTGTCGATCCTAAACTGCATGAACTGGGTGCTGATGCGG
CCATCGGCATCAGTTACGACGTACACACACTCAGTCAGACGAGCTTCCCCTAGTTCGTCA
ACTTGACACGGTTCAAGTGCTTGAATAATCGGTGCATTGTCGTCAATATTGACAATCAGC
AGTGAAACACCCGCAACCAATGTCTCCCCATCTATCCTGATGTTGAACACATACTGCTGC
ATTCCAGGAGTTTCGTAATCTTGTCTCTGAGTAATAATAAGGTGCCATTCTCCATTACTA
TCTGGTATCCTGCGGATAACGGGCACGAGTAGATTGAAAGAACCAGACAGAAATGCTGGC
TCAATGTATGGTACATTTGGACCGCGGTAATTGAGTTTGGCGATGGGTACTTCTCCTTCT
ATCTCTTCTTCCATGTAAATAATCTGAGTTCCGTAGGTAGGTGTAATCGCGTGGTAACCG
TCCATGCAGACATCTTCGCGGTCTGCCGCCGGTATTAGTGGTCTTTGACTCCAGGTTTGA
CCTTCGAAGTCTAGTTCAGGCAGATCCGGCCTTGGTGGTCTGGGTATGGCAACCATGAAG
CCGCATCTTTCTGGAATTTTATCAGTACAAGATAATAGGAGTCCGGGTGATTCCGTGCTC
GGTAATGCAGATGATGTTTCGGCCTATTCAAGTCACCCCTGTTATGTGCGTGTACTGATT
TGATGATTGTAATATTTATGTGACGTACGTCCATTTATTAATCTATATACTAATATATAA
ATCTACAGTGATTTTTACGGAAGTTCCGTTATAACTACTGAACCGTGCATCCG
(5453 bp)

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