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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28422_c4_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0044822 F RNA binding
Transcript
Level		FPKM:23.82 TPM:31.72
ORF EntryO_BomoN4EE10396_complete:A_BomoN4EE_TR28422_c4_g1_i1
Sequence
(Nucleotide)
AATCAACCAAAACATAATGGAAAAAAATAATCTTAGTAGACATTTACACGGATTTGAAAA
AGATAAATGAAGAATACATAAGAATTGGCTTTTTGGCCTTGAAATTTACTGAATGATGCA
TGTTAATGAATGAATGAAATAGATAAAAATTAAACATAATGAAATATATGAAAATATAAA
ACCTAAGAATTGTCTGAATGGCTTAGTTCCATTGCCTTTTTCTCCGAGAAAAACCCTACT
ATACGAAGTTAACAACTAAGATGAAGTTTGTGACTTTTGTGAGGTTGTAATTTCATTGAA
TTTTCGAATTTCATGCCTTTTAAATTTACGCTGTGAAAAGTATTTACCAAATCAAAGTCC
CTATTAAATGAACACTAGTAGTCAGAATTAGATAATTGTTCGTAATGAGTATTAAAGAAA
AAATCTTAATTTCACGGTATCGTAAATGACCGCAAAGAGTTAACAAACTTTGAAAAGCTA
CAATACATTAATACAAAATGAGTCTTAGAGGTCTATCTAAAAGGGAGTTGGAGGAACTTC
GAAAGAAAGAAGAAGAAGAAGCCGCTGCACATGTATTCAAAGAATTTGTGGAAACTTTCC
AAGAAGCTCCGAGCAGTACCAGTAAAGTTTGGGTCAAAGCAGGAACCTATGATGCAGGAG
CTCGAAGGGAAGATACAAGTGAAAAAGGTAAACTGTATAAGCCTGTTTCTCGTTTAGATG
AGAAACGTGGTGGGAATGACTCTGACATGCTTAGGAATCTTACGTTGAAGCAAGAATCAG
GCAAACCGCGATCCAAGCAAAAAGGCCAAGATAAGAAGAAAAGCAACTTAGAATTATTTA
AAGAAGAGCTAAGACAAATACAAGAGGAGCGTTCAGAACGACACAAGTACAAAAATGTAC
TCAGAGACAAAGGAGCCATTGAACAAACCTGTGATATGATCCCTGATGTGGGCTCATATG
ATACCGGAGATCCAAATACAACTAATCTGTACTTAGGAAATCTAAACCCAAAGATAACAG
AACACCAGTTAATGGAGATCTTTGGTCGTTACGGGCCATTAGCAAGTATCAAGATAATGT
GGCCACGTTCGGATGAAGAGAAGGCACGGGGCCGGAACTGTGGCTTTGTAGCCTTCATGT
CTCGTAAGGATGGTGAACGAGCCCTGCGGTGTATTAATGGCAAAGAGATAATGAATTACG
AGATGAAGTTAGGGTGGGGCAAGGCGGTCGTGATACCCCCGGTCCCCATCTACATCCCGC
CGGCGCTGCAGCAGCCCTGCAAGCCGCCGCCGCCCTCCGGCCTGCCCTTCAACGCGCAGC
CGCCCAGACACCTCATGCACAAGATACCACGACTACGACCCGGCGAATACAGTCCCAGTG
ATCCCGATGACAAGGAACTCTACGACAAGATCCTGTCCCAGTCCATAGTTAAAGTTGTGG
TACCCACAGAAAGAAACATCCTAATGTTAATACATCGAATGGTCGAGTTCGTCATCCGCG
AGGGTCCGATGTTCGAGGCCATCATCATGAACAAGGAGATGCACAACCCCTACTTCCGGT
TTCTGTTCGAGAACCAGTCGCCGGCCCACGTTTACTATAGGTGGAAGCTGTACTCCATGC
TGCAGGGAGACTCGCCTAAACAGTGGAGGCTGGACGACTTCAGAATGTTTAAAGGTGGTT
CAGTCTGGCGGCCGCCGGTGATGAATATGTACACGGCGGGCATGCCCGACGAGCTGGTGG
AGGAGGAGGACGCCAAGGACTCCATGAGAGGAACGCTCTCCGTCAATCAGCGCGACCGGC
TGGAGGAGCTGATCCGCTCGCTGTCCCCGACGCGCGGCAGCGTGGGCGCGGCCATGGCGT
GGTGCCTGGAGCACGCGGAGGCGGCGGGCGAGGTGGCGCAGTGCGTGTGCGAGGCGCTGG
GCGGCGCCGACACCGCGCCGCACCGCCGCGTGGCGCGCCTCTACCTGCTCTCCGACATCC
TGCACAACGCCGGCGCCAAGCTCACCAACGCCAGCGCCTACCGCGCCGCATTCCAGCAGC
GGCTGGCTGAGATCATGCGCAACTGCCAGCAGGCCTGGGCCCGCATGCCGTCCCGCCTGC
AGCAGGAGGGCTTCCGGGCCCGGGTCACGCGCATCCTGCAGGCCTGGGCCGACTGGGCAG
TCTATCCCACTGACTTCCTACTACATATTAACGACATCTTCCTGGGACAAGATAAGGAGC
GTCGTCCCTCGACCGAGGCGGGTGCGGGCGGCGCCGGCGCGGTGGAGGAGGCGGTGTCCC
CGCGCTCCGACGCGTCCTCCTCGTCGTGGGAGGGCGGCGCCCGGGGCCCGCTGGACGGCG
CCGCCCTGCGCCGCCTCGCCGCCGGCCGGGAGCCGCACGCGCCCGCGCTGCCGCCGCCGG
ACATCGACGGCGTGCCCGTGGATGAAGATATTGACGGCGTGCCGCTGGAGCCGGACAGCG
AGGAGGGCGCGGGGCAGGGCGGGTTCGTGCCGTCCCGCTGGGAGAGCGTGGAGCCCGCCG
CGCCGCACACCCCGCCCCCGCCCGCACTGGACGAGCGCGCCGCCCCGCCCCCCGCGCCCG
CGCCCGCACCCGACACGTCGGAGGAGCAGACGCTGAAGCGCGAGACGCTGCGCGAGATCG
AGGTGCGCGTGCTGAAGTACGCCGACGAGCTGGAGGGCGGAGCCCGCGCGCCGCGCCCCG
GCCTCGCGCCCGCGCAGCAGATACAGCACTACCGACGGAAACTCATCAAGAAGGCGCTGC
GCGAGGTGCGGGAGGCGAGTGCTAGAGAGTCGCCCGAACAGAGACGAGTCACTGAGGATG
ATGCGTACTCAACTTCATCTAAGAAATCAAAGAAGTCCAGAGAGCCTACGTTATCGCCGC
CGCCGAAACGGTCGCGTCACAGTGATCGCCGTTCCCGATCCAGGTCTAAGTCTCGCGAGA
AGGACAGAGATCGAGAGAGGAGCCGCGACCACGAGAGAGAGCGAGACAGGGATAGGCGAC
GTCGTTCGCCGGCCACGCCCCCCTCGCACCGCAAGCATCACACCAAACACGCCAAGTACA
AGTACTGACAGTCGGTCTAGCAACACCACCCCACTTGGTGTGACCAACGGATGGACTATT
GATAACTTATCCTGTGCTACTGCAAACATTTTCATTGCATATTTTTATACAGATTGACTG
GTTGAACACTTTACATACTCAAGGACATGATAATTCATGGTCACGTGTAACGTTTAAAAA
TATAAAATTAAAAATATACAAATGAAATACAAAGAAAACCTTCATTAAACGAATTTGCTA
AAACTTGAAATTTGTGGACACCGTATCAAATATCGTTTGCGAAAAGACCGGCGCCCGCGC
GTGTTTTGTTTCGTCACTGAATGGGTGTGCCGCAGGGCGGGGGTGAAGCGCCGCCCGGGG
GTAAGAACAGGGTTGCATCTAATCAGCGCGCCGCGTTCAAACGATACCGCGATCATCGAC
CGGTGTAAACAAACCAGTACATAGGTACCTTCCTACCTTGCCGCATGACCGGCCAATTCT
GTACTTCGCGCGAGTGACCACGCTTATTGTTTCGAGTAGATAATTAAAGATAAATTAGAC
AAATATTAGGAACCTATTTTTTTTTTGCTTAATGAATATATAATATGTGAATAATAAATA
TGTGAAGTGTTCAACCATTCAGCCTGTATAAAGGAAATTAAAATGAGACAGATTATTGGT
AAACTGTTCCGTAAGTGAAAATGGGTATGAATAGAATGCCGTTGCAATTTATTTACATGG
ATTTATATATTATATGGATAAAGTGATCAGTGATCAGTAGGGAAAACTAATTCAACATTA
ACATGTTTATAATAGAATCATAAATAAATGCAATGATGATTTAATTAAAAAAAACGAAGC
TTCAAACATGATCTTTCATGGAAAAAAATACACTTTCACACTAGGCATATAGTACTAGCA
AGTAACAAAGACATTCTATATTATCATTACTATATTGCATGGTTTTGGTGACTAGTGTAC
CCGAGATAAATATAGAATTATGTTCGTTCGTCGTGAGTGCCTGATGATGCTCCCATATCG
TCCTCAGCTTTTGAACGTTCCATCGCGTTTGACATGTAAATATTAGATCGTAATAAGAAT
GATTAAATGTATGATTGAAGAGCTGATGTTTTATTGCTTTTTTTTATAAACCTCAATAAA
AGACCGA
(4207 bp)

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