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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28412_c2_g2_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_DNA_repair_protein_complementing_XP-A_cells_homolog_[Papilio_machaon]
Ontology
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
Transcript
Level		FPKM:16.38 TPM:21.82
ORF EntryO_BomoN4EE10338_complete:A_BomoN4EE_TR28412_c2_g2_i2
Sequence
(Nucleotide)
GTCAAAACGGCCATTATAGCGCGTACCATAGATTATACACTTAATTGGCGCGTACCGATA
TTGTATTATTCCAAAAACATTAATATGAAAAACATAGTTCCTAATATGGAAATGTAAACA
CTAACTAATAAAATAGACGAGTAGGATAAAATAAAAACTCCAAATTAAAACAAAGTCTCA
TCAACATGGACAGCGATGAAGTAAACATATCCCAAGAGAAAAAAAACAAATTAACTGCCA
CACAGCTTGCCCGCATCGAACGGCAACGTCTACGGGCCAGAGCACTGCGTGACTCTCGAC
CCTTGCTGAGAAATGAAGATAAACCCGCACCAGTACCCACTCTTGGATGCGGAGGTGGAT
TCCTGCCAGAAGAGACACACGAGCTGAATGCAGTGGTTGCGCCTTGCGCTCCCCTCGTGC
ACCCCGGCCACCAACCCCATTGTCTTCATTGCGGACGACCCTTTCCACAATCTTTCCTCT
ATGACAACTTTGACTATTCAATTTGTGACGAGTGTAGGGATACTGAAGGAGAACACGCTC
TCATGACACGCACAGAGGCCAAGAACGAGTACCTTTTGAAGGATTGCGACTTGGACAGTC
GAGAACCCCCTTTGCGATGTTTGCGACGCCGCAACCCGCACAGCGCTCGGTTCGGCGACA
TGCGGTTGTACCTGCGCGCGCAGCTGCAGGAGCGCGCGCTGCAGGTGTGGGGCTCGCACG
CGGCGCTGGACGAGGAGCGGGCGCGGCGGGAGGGCGCGCGGGCGGCGGGGGCGGGGCGGC
GCGCAGTCCGCCGCCTGCGCGCGCTGCGGATGGACGTGCGCTCGAGTCTGTACACGCCCC
AGCGCGCCGCACACGAGCACGAGTTCGGTCCCGAGACGCACGATGCCCGCGCCGACGTCT
ACTCCCGCTCCTGCCTCTCCTGCGGACACACCCAGTCCTATGAGAAGATGTGACATTTTA
AATTGAAAAAAAAGTATGGAAAAACAAGTGCTACCTTTTAAAATTATGTATTGTACAAAT
TGTGATAGCTGTGAACATAACATTGATTAGTCAAAAATGGAATTCAAAAAAAAAAAACAA
AAAAAAAAAATTAAAATATTTTGTGAAAATGGAGCAAATTACCTGAGTAAAAGATAATCT
ACCCAGGTTTAAGCTATTATTATTCACAGCTCTAAAATGCATTCTAGGTTCAAATCAGGA
GATCTAATTTGATTTGACACAGATACCTAACCACCAGCCTGCTTATTACTGCCATAAAGT
AGTCATTCATTTCGGTTTGGAGGGTGGCCACTTAACAACAGGCTGTTGGATTGTCCACCG
ATCTAATATATTTAGAATTGTTTTGCCTACCTAATTGCTGGTCACCTAAAGAAGCTATTT
CAGCCATGCACGGTTTGGTAGGTGAGCTTACAGGCCTCAACCTGGAAGAACTTGCTAATT
AGCTCTAGCCAGAATTCCTCTGGCTTTGCTGAATCTACCACCATATCGGAATCGCAAAAA
AAATTCGGCGAATATCTCATCATCGAGTTCCAGAAAACACCTAAAACGGACTAGAAAGGA
GAGTGGTAGATAAGATTTTTCTGCTTCTAAAATCCTCCCCACAGTCTCCGACCTACCTGT
GATCATGTCGTATGTAACAGCGCCGAAATATCAGGAAGCCATTAGATGTGTTGCATTTAG
GTTAATTCGCCCCATCTAAAACAAAAGTTTGCACGCACACTAGAATAGCACCGCACTTCC
GTGAAGTATCTACTTCATTTGACTCCACACAGAATACGGCCGTTCGATTTGTCGGTAAAC
CGGTCTCGCAGGTAGTTCTCTGTTTTTTGTACCGTACGTTGTTGCCATCAGGCCATCGGG
CTACTCTAAGGAATTGTTTAAGATTATCTCATCGTCTCTATTTTATCATAGAACGACGTC
GGTAGTGGCGGGAAGCAGCTGAAGCAAAGTACCTATGTCCCGCACGTACCAGCTGAAACT
CCTGTGATCTTGTTCAATTAATCCTAGAAGTTAAAATTGAAACCAACCAAAAAAACGACT
ATCGCGCAACAACCCGCGTTCAAGCTTCAAATGATACAGAAGTTAACGGCAGAAAGCGTG
TAGGTCAATGTGCTTAGTGCGAGTTTTTTAACGTTCTCGTTAGCTTAAAACTTAACTCAT
ATTAAAATTTGAATGGAATGGGATCGTTTGCCGCT
(2195 bp)

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