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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28410_c1_g1_i7
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:0.22 TPM:0.30
ORF EntryO_BomoN4EE10327_complete:A_BomoN4EE_TR28410_c1_g1_i7
Sequence
(Nucleotide)
ATCACAGTGTTAATCTTTTAGGTTAGGTTATCTACACACACGCGAACAGACCTGACATTG
TTGATCGGCGCAGATATTTCCGATGGTGAGTATGCCGGTAGATTCTCTGGCCCCGCAAAA
GCGACACGTTCCAGAGGGAGCCACCGGTCCCGAAGCCACGGCCGGTCCCTCAGATGATGG
TCCGGCTTCACAGACTCCACCTTCCATTCCTCTGAACTCGGCTAAGGCTTTCAGCGTACG
CCTGTCGACCAGGAGCAATAGCCAAAACAGTTTCGCGCGTCCACAGCCTTCGTGTATGTC
GATGCGTATAGCGCTCTCCTCCTCCTTGCAGATCTGTCTGTGGTGAGTCCTGGCGGTCCT
GTTTAGGTGCAAGAATCGATCGCATTCAGCACAGAGCGGTCCACAATTGCGGCAGTCTAT
GACCGCCGCTGTGGCGCCGTCGTCGTGGTTGGCGCACAGAGGACGAGTCTCGGAGGAAGA
GTCTCGACCACGAGCTCCGCGCCCGTCTCCAGAACTGTTGACGAGATCTAGATGTGATTG
TTCACACACGCACAGGGAAGCTAGCGCCATCCAGATAGTGGGGGACGCGATGCAAAGCGC
CGGCTGTCTCTCTTTTTCGGATACTTGCGATATGGCGCATACGTAGTTGGCTAATTGGGT
ACGTGTCTCTAGGCCCCATGAACCAGCCAATTTATCCTCTGCCATGTCAGATAGAAGTTT
AGCTACCAAATGTGCGTGTTTTTTGGTAGTCTCGCCTCTCATGAACCAATTACTCGCGGA
CAAGGACACCATACTGCCCCCCATCATAACGGTAGCTGGGGCCGATCCACTTGAACCTTT
CACCTTCATTTGAACTGTGATCGCTTTGCCCAAATAGCAAACCAGATGGTCGAGTAAAGT
TACCCTGCTAATCGGATCGGAACCATAATTGACGGCCGCTAACATCTTCTGGGGCGGTAG
CTCTATGACCAATCGACGTAAGAGCGATATTACCTGTCTTTGTACGCGTTCGCTACCAGT
GTGAAGCAGAGATAACAAGTCAGATAGTAGTTCCGTGCGCTGAGCAAGATGTACTCGACC
CACTGCACTGCCGCTGAGTGCCAATAACAGCGAGAGCATTTCAAAGCAGTAGTTGTCCTG
CTGCGACCCCACGTGTTTGGCGGCTGGCGACTCCTCCCATTCACTATCCGTGGGTTCGAC
ACAAAGCAGAGTTGTCTCCCAATCATCGCGCACGCGGGCAGTCTCACATCCGATCGCACT
TACTATATGAGACATCACTTGTCGTTGCAGAGATGTAAGTTTGTGTCCAGCGAATAGGAT
GCCAACAACGTGCTCTCTGAGATCGCTGTCGTCGTTGGCAACTCCATCGTCGATTGCTAC
CGCGGCTTCGGCGCTCGCGTCGCTAGACTGCTCCCATTCCAAGAGCTTCCCGAACACCTG
AGAAGTCAACAAGCGGAAAACTCGCAGGGTGTCCGTTTCGCAGAGTCCGTGCAACACTTG
CGGCGCTGTCACGGCGGCTGAATGGAGGAGCGTCGGCGCGCTCAGGACCCGGACCTGGCG
GATTCGAACCGCCGCTTCGGGACCGCGGAGCTCGCATCGAACGCGCAGCGACGTGGTAGA
CACACGTGGTAAAGTATAGCAGAGCCAAGTAGCGACCTTCGGATCGACTTCTATGTCTTG
CATGTGGATCAACTCAGTGGATCCTGAGCTGTACAGGAACGTCATCAGCAGCGTCTTGTT
CACAGTGTCCCTTGTGTTATCGATGTGGACGCACACAATGTGCGGGCGATCATCGTGCGA
GCCTCCCGGGTAAGAGATTTGTATCCACTTTGCTTTGTTCCTGTCTTCGTCGCCTGATTC
CCAGAACGTCTCCGTGCTGCCGTCGGTTAAGGCGCCGGCCATGCCTTGACGTGAAGATAC
CGTAATATCGCACCAGCCAGTCACGTCGGAAGAGCTCCATACATGATTCTCCTTCAAATA
GCTATGGAAGCTGTCGTGTATGGCACAATGTGGGCCGTCGTCGTGGACGCCTTCCTCAGA
ACGAGATAATATCTTGCTGATTACACTGAACACTTGCGATCTGTGCAAGAAAGCCCGATC
GTGGCTGGAGTAGTGGAGCGCCCAGCATCGTATGGCCTGCAGACTCGCGGCACTGGCGTG
TGGTAGCGATGGTGCTAAAGTACTGACGGAGCCCAGGAACGAGTGGAAAGCAGCTCGGGC
GCCGCGGGCTGCTCGGCCGCCGGGGCAGATGGCGGACGTCGAAGCGGTTGGCGGGACCGT
GCGTATCGGCTCTGCTACTGCATTCTCCTTATTATCTTCAACAATGTGCGGTGGTGGTAC
GATCCTGGCAAACTTTTCCAAAGCTGTACAGAACCACCACATAACATCGTGGGCGCAGAT
TGGCTGTGTCGCTGAACGAAGCAGCCAATTGAGGGCCTCAAACGCGTATTGTCTGACAAT
GTTAATCCTGACGGCCGCGTCCATTTTCTCTCTGTGAGCGGCCAAATCGCGTTTTGCGAG
CACGAAGCTCAGCACCGGCCTTTTCATTATAATGTTGGAGTCTAGTCGAGGGGCTTCAAA
TGCGGACAAAGGACAGTCCGTGGCACTCCAATCGCCGCAGCTGAGTAGACCCTTCAGCGC
CTTGCTCGGTTGCGAGAGCAGTGACAATCCACTACCGGTGGCGGTGTCATGCGAATCGCT
ACGCAACTTGCGAGTGAGCAGAGGTCGGGCGGCTGCCGCGAGGTCTCCTCCGGCTTGTCC
CATAGACACAGAACGGTGGACTCGGGGCTGGAAACCAAGGCTGGCCTCCGGAGCGGCGAA
ATTCGACACTGTAGGAGCGATGGCAGGGGGTTGCGGACGTCCTAGCGAGTGATACTTGGC
GGCGTCGTTGTTGTCGTTCTCTTTAGGCTCAGCGCCGAGTGCTTGTAGGCATTGGAAGGG
AGGCGCCGGTTGCCATACGCTCCCCGGCGAAGTCGGGGGGCTTCGACTCAAGTTCTCGCT
CCATGGAGACACGCTTAGAGGTTCTGAATCAGTGAGTGGAGCCAAATCGAGGAGGAACAA
AGCGTTCTCTTTCATCACATTGTGATCAATTCCGGGAATCATGTCTAGTCGTTCGGTCGA
CATGTTCATGGCCGACTTCGACTTGGCTTTTAGAGTTTTCTCTCTGCACCTCTCGCAATA
GATGTACCATAGTTCGTATGCTTGGGCGAGTTGTCCACACGCCGTGACCGGGGTGTCGGC
GGTGGCGGCCTGCGGCTCGGCCTCCCTGTAGGTGCCGGCGCGGTCGTATCCATGCAGCGT
GACGGCGCGGCAGCCCGGGTGGGTGTGGCGCATGTGCGCGGCCAGCGGCGGCGGCACGTT
CGAGCCCCCGCACAGCTCGCACTGTACTACGTACGGGGTCTTGGTCGTCTGACGTCGCGC
CAGATCCCGTTTGATCTTCTCGGTGGTGGCAGATAGTTGATCTGCATCGTAGAGAGCGTC
CCACAGAGCCACCAGAGCGCGCAATGCGGGAGGCAACACGTTCACTACAGCCGGAGGGGG
AACTGGATCCGTTGAAGTGCTGCATTGCGGTTGCATATAATCTTCATTCATTTGGACGTC
CACATCAGCTTTTCGGGCTCGACTCTCGCTAGCTTCGATTCCGGAGCGAGTTAATGTCTC
CAAAGTCGAGGGATTGATGTTGAGGTACTGCCCTGCGTTGGAGACTTCAACGGAGTGCCT
CTGGTTACGAGCCAGACTGAAATCGTGAGAGGATCGCGTCACCACTCGTGTCCCTTGCTT
CGGCAGCTGCGGGTGGAACTTTAAAAATGCCGCGCATGCTATTGCGTCATGTACGATACC
TTCGTGCCATAAAAGTGCTGCGAAAATACATCGAAGAGTTTCGGCCTGCGCCGGGCTGAG
TGCGTGCTTCTTCGGCGGTGGGGGGGCGGGCACGGAGCGAGACGGCGGCGGGGGCGGGGG
GCTGGCGCGTCGATACGGACGAGACCGCGCCGGTGTTCGCTCGCGAGGCACCGGCATTGG
ACTGACACGACCATCCTTCGGTCCGGTCGCGAACAAATGCACTGGAACCAGCATATCGTC
AACGCTCTCCGGTGAAGTCTGTGTGCCGGCTTGTGCCATGCGACTGCCGCAGCGCTTGTC
TTGCTCAGAGTCATCGCCATCCGGTTCGATGTCCGTCTCGAGTATGGTATCAACATCTCT
GAAGTTGTCGCTCGATCTCTTACTGGGGGGCCACCAGTCGTCATTATTTCCATTGCTGCG
ACGCTGAATAGCCGATGACGGTGAGGAACAGAGATCTTCGCGACTTTGATTTCTCTTACA
AAGCTCCATGGCCTGTGCGATGGCACTTGACCCGCTGTCACTATCGTCGTTTAGTTCAGT
TAGAGGGAGTCTGTGATCGATCCCGCTGGGGCCATCTGCTGCAGCCCCCTCGCAGTCTTC
ATCCTGACTCCACGAGAGCGTTTCGTCTCTCATCTCACCTGCGCCCCTCCAGCCACCTTC
CTCTTCTTCCGGTATGGGACTACTAGGCTCAACTGGCTCCAGCAAAATTCGGTCGAGATG
TCTGTTGTGCTGGAGACACCAGGCCACGCCCGAACTTTCCTCGGCATATAGATTCGCGCA
ATCCAAACTCAAACGTACCCACGTTCCATCTTTGTTCACAACCTAAAAACAAATAAGTAA
TTTATTATAATGAATTTCGTATCCGATCAGAGCGAACCATTCCCAAAAACCAAGACACGT
GGCGGTGGTGGTCAAATATTGAACGGAAATCAAGGAGTCGTGTGGCGTGCAGAGAGCCGT
TGT
(4803 bp)

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