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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28410_c1_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:0.42 TPM:0.55
ORF EntryO_BomoN4EE10305_complete:A_BomoN4EE_TR28410_c1_g1_i2
Sequence
(Nucleotide)
GTTATTGCCTATCATTTATGTATAAAGCAGTCATTGCCGCTTAGTCACGTTTGCCTTTCA
AGCGTCGATATGCTAGATAGCCGATAGAGCAAAATCACAGATGTGGTACAAAAAGCAGTT
TCGCGGCGGAGGCGTGTTATAGGGGCGCGAGTGTGACCACGTTGCGTTTAGAAGCCTTGC
GCGTGCCGACACACGCCGCAGCCGAGCGCGAACTCCTCGCCGGTCGCCGGATGTTGCACG
TGCAGAGGACACTCGTCCGATGTACCCGGCAGCTGTTCACCTTTAGGACCTGCTGGACAT
TGAGGCAACAGATGTCGCGGTATGTGTGTGACGCGCTGGAAGTCGTCGTGGCAGGCGTTG
CAGAAGTGCGACGTGCCGAAGCAGAAGAACACTGCAACCGAACAGCAATACCGGCATTTG
TACTCGAGAAAGTCGGCTCCGTGTTTCGGGCAAGTCCTAGCGCCGGTGACGTCACTGCAA
GCGCCGCACACGAGCTCAGCCGGCTCCCACCAGCCATTCGACTCGGCCTCACAACGAGCC
AGCCCGCCGAAATAGGCCTTGCCACATTTATGACAGACGTAATAAGCATATCTGTCCATG
GCGTAGGAAGCCGGATCGGAAACATTGCGTCCTTTGGTCCCGCCCGGAGCAGACAGGCCC
TCGTACTCGAGTCTCATTAGTGCCTTGCGTTTCACTTCATCACGCAGTTGCCTGATAGGT
GTTAACAACTCTTCAAGGGTCCAGTGGTTTATGTCCTCCTTGCAAATTGGGCACTGCGAG
AACGAGAAACTAATCCTGGGACCGTTCCACTTATTGACGAGCACCTTCCTGCAGCAGTGC
AGATGGAACACATGCCCGCAAGTTAGCTGTATCGCAGGGGCGGCCTGCAAGGGGTCAGTG
AAGCAAATCATGCACATATCGTCCGCGTCCTGTCTCAGTGGCGCTGCCTCACCAGCTGAG
ACGCCCGCGCACCCATGTAGGCACGGCAGACAGGTTTGCTCTCCCCGAACTCCACCGCAC
AGGTGACCGCAAGCGAGGATGACATTACATGCTTCCCGACCATGGTCCTGACATTGTTGA
TCGGCGCAGATATTTCCGATGGTGAGTATGCCGGTAGATTCTCTGGCCCCGCAAAAGCGA
CACGTTCCAGAGGGAGCCACCGGTCCCGAAGCCACGGCCGGTCCCTCAGATGATGGTCCG
GCTTCACAGACTCCACCTTCCATTCCTCTGAACTCGGCTAAGGCTTTCAGCGTACGCCTG
TCGACCAGGAGCAATAGCCAAAACAGTTTCGCGCGTCCACAGCCTTCGTGTATGTCGATG
CGTATAGCGCTCTCCTCCTCCTTGCAGATCTGTCTGTGGTGAGTCCTGGCGGTCCTGTTT
AGGTGCAAGAATCGATCGCATTCAGCACAGAGCGGTCCACAATTGCGGCAGTCTATGACC
GCCGCTGTGGCGCCGTCGTCGTGGTTGGCGCACAGAGGACGAGTCTCGGAGGAAGAGTCT
CGACCACGAGCTCCGCGCCCGTCTCCAGAACTGTTGACGAGATCTAGATGTGATTGTTCA
CACACGCACAGGGAAGCTAGCGCCATCCAGATAGTGGGGGACGCGATGCAAAGCGCCGGC
TGTCTCTCTTTTTCGGATACTTGCGATATGGCGCATACGTAGTTGGCTAATTGGGTACGT
GTCTCTAGGCCCCATGAACCAGCCAATTTATCCTCTGCCATGTCAGATAGAAGTTTAGCT
ACCAAATGTGCGTGTTTTTTGGTAGTCTCGCCTCTCATGAACCAATTACTCGCGGACAAG
GACACCATACTGCCCCCCATCATAACGGTAGCTGGGGCCGATCCACTTGAACCTTTCACC
TTCATTTGAACTGTGATCGCTTTGCCCAAATAGCAAACCAGATGGTCGAGTAAAGTTACC
CTGCTAATCGGATCGGAACCATAATTGACGGCCGCTAACATCTTCTGGGGCGGTAGCTCT
ATGACCAATCGACGTAAGAGCGATATTACCTGTCTTTGTACGCGTTCGCTACCAGTGTGA
AGCAGAGATAACAAGTCAGATAGTAGTTCCGTGCGCTGAGCAAGATGTACTCGACCCACT
GCACTGCCGCTGAGTGCCAATAACAGCGAGAGCATTTCAAAGCAGTAGTTGTCCTGCTGC
GACCCCACGTGTTTGGCGGCTGGCGACTCCTCCCATTCACTATCCGTGGGTTCGACACAA
AGCAGAGTTGTCTCCCAATCATCGCGCACGCGGGCAGTCTCACATCCGATCGCACTTACT
ATATGAGACATCACTTGTCGTTGCAGAGATGTAAGTTTGTGTCCAGCGAATAGGATGCCA
ACAACGTGCTCTCTGAGATCGCTGTCGTCGTTGGCAACTCCATCGTCGATTGCTACCGCG
GCTTCGGCGCTCGCGTCGCTAGACTGCTCCCATTCCAAGAGCTTCCCGAACACCTGAGAA
GTCAACAAGCGGAAAACTCGCAGGGTGTCCGTTTCGCAGAGTCCGTGCAACACTTGCGGC
GCTGTCACGGCGGCTGAATGGAGGAGCGTCGGCGCGCTCAGGACCCGGACCTGGCGGATT
CGAACCGCCGCTTCGGGACCGCGGAGCTCGCATCGAACGCGCAGCGACGTGGTAGACACA
CGTGGTAAAGTATAGCAGAGCCAAGTAGCGACCTTCGGATCGACTTCTATGTCTTGCATG
TGGATCAACTCAGTGGATCCTGAGCTGTACAGGAACGTCATCAGCAGCGTCTTGTTCACA
GTGTCCCTTGTGTTATCGATGTGGACGCACACAATGTGCGGGCGATCATCGTGCGAGCCT
CCCGGGTAAGAGATTTGTATCCACTTTGCTTTGTTCCTGTCTTCGTCGCCTGATTCCCAG
AACGTCTCCGTGCTGCCGTCGGTTAAGGCGCCGGCCATGCCTTGACGTGAAGATACCGTA
ATATCGCACCAGCCAGTCACGTCGGAAGAGCTCCATACATGATTCTCCTTCAAATAGCTA
TGGAAGCTGTCGTGTATGGCACAATGTGGGCCGTCGTCGTGGACGCCTTCCTCAGAACGA
GATAATATCTTGCTGATTACACTGAACACTTGCGATCTGTGCAAGAAAGCCCGATCGTGG
CTGGAGTAGTGGAGCGCCCAGCATCGTATGGCCTGCAGACTCGCGGCACTGGCGTGTGGT
AGCGATGGTGCTAAAGTACTGACGGAGCCCAGGAACGAGTGGAAAGCAGCTCGGGCGCCG
CGGGCTGCTCGGCCGCCGGGGCAGATGGCGGACGTCGAAGCGGTTGGCGGGACCGTGCGT
ATCGGCTCTGCTACTGCATTCTCCTTATTATCTTCAACAATGTGCGGTGGTGGTACGATC
CTGGCAAACTTTTCCAAAGCTGTACAGAACCACCACATAACATCGTGGGCGCAGATTGGC
TGTGTCGCTGAACGAAGCAGCCAATTGAGGGCCTCAAACGCGTATTGTCTGACAATGTTA
ATCCTGACGGCCGCGTCCATTTTCTCTCTGTGAGCGGCCAAATCGCGTTTTGCGAGCACG
AAGCTCAGCACCGGCCTTTTCATTATAATGTTGGAGTCTAGTCGAGGGGCTTCAAATGCG
GACAAAGGACAGTCCGTGGCACTCCAATCGCCGCAGCTGAGTAGACCCTTCAGCGCCTTG
CTCGGTTGCGAGAGCAGTGACAATCCACTACCGGTGGCGGTGTCATGCGAATCGCTACGC
AACTTGCGAGTGAGCAGAGGTCGGGCGGCTGCCGCGAGGTCTCCTCCGGCTTGTCCCATA
GACACAGAACGGTGGACTCGGGGCTGGAAACCAAGGCTGGCCTCCGGAGCGGCGAAATTC
GACACTGTAGGAGCGATGGCAGGGGGTTGCGGACGTCCTAGCGAGTGATACTTGGCGGCG
TCGTTGTTGTCGTTCTCTTTAGGCTCAGCGCCGAGTGCTTGTAGGCATTGGAAGGGAGGC
GCCGGTTGCCATACGCTCCCCGGCGAAGTCGGGGGGCTTCGACTCAAGTTCTCGCTCCAT
GGAGACACGCTTAGAGGTTCTGAATCAGTGAGTGGAGCCAAATCGAGGAGGAACAAAGCG
TTCTCTTTCATCACATTGTGATCAATTCCGGGAATCATGTCTAGTCGTTCGGTCGACATG
TTCATGGCCGACTTCGACTTGGCTTTTAGAGTTTTCTCTCTGCACCTCTCGCAATAGATG
TACCATAGTTCGTATGCTTGGGCGAGTTGTCCACACGCCGTGACCGGGGTGTCGGCGGTG
GCGGCCTGCGGCTCGGCCTCCCTGTAGGTGCCGGCGCGGTCGTATCCATGCAGCGTGACG
GCGCGGCAGCCCGGGTGGGTGTGGCGCATGTGCGCGGCCAGCGGCGGCGGCACGTTCGAG
CCCCCGCACAGCTCGCACTGTACTACGTACGGGGTCTTGGTCGTCTGACGTCGCGCCAGA
TCCCGTTTGATCTTCTCGGTGGTGGCAGATAGTTGATCTGCATCGTAGAGAGCGTCCCAC
AGAGCCACCAGAGCGCGCAATGCGGGAGGCAACACGTTCACTACAGCCGGAGGGGGAACT
GGATCCGTTGAAGTGCTGCATTGCGGTTGCATATAATCTTCATTCATTTGGACGTCCACA
TCAGCTTTTCGGGCTCGACTCTCGCTAGCTTCGATTCCGGAGCGAGTTAATGTCTCCAAA
GTCGAGGGATTGATGTTGAGGTACTGCCCTGCGTTGGAGACTTCAACGGAGTGCCTCTGG
TTACGAGCCAGACTGAAATCGTGAGAGGATCGCGTCACCACTCGTGTCCCTTGCTTCGGC
AGCTGCGGGTGGAACTTTAAAAATGCCGCGCATGCTATTGCGTCATGTACGATACCTTCG
TGCCATAAAAGTGCTGCGAAAATACATCGAAGAGTTTCGGCCTGCGCCGGGCTGAGTGCG
TGCTTCTTCGGCGGTGGGGGGGCGGGCACGGAGCGAGACGGCGGCGGGGGCGGGGGGCTG
GCGCGTCGATACGGACGAGACCGCGCCGGTGTTCGCTCGCGAGGCACCGGCATTGGACTG
ACACGACCATCCTTCGGTCCGGTCGCGAACAAATGCACTGGAACCAGCATATCGTCAACG
CTCTCCGGTGAAGTCTGTGTGCCGGCTTGTGCCATGCGACTGCCGCAGCGCTTGTCTTGC
TCAGAGTCATCGCCATCCGGTTCGATGTCCGTCTCGAGTATGGTATCAACATCTCTGAAG
TTGTCGCTCGATCTCTTACTGGGGGGCCACCAGTCGTCATTATTTCCATTGCTGCGACGC
TGAATAGCCGATGACGGTGAGGAACAGAGATCTTCGCGACTTTGATTTCTCTTACAAAGC
TCCATGGCCTGTGCGATGGCACTTGACCCGCTGTCACTATCGTCGTTTAGTTCAGTTAGA
GGGAGTCTGTGATCGATCCCGCTGGGGCCATCTGCTGCAGCCCCCTCGCAGTCTTCATCC
TGACTCCACGAGAGCGTTTCGTCTCTCATCTCACCTGCGCCCCTCCAGCCACCTTCCTCT
TCTTCCGGTATGGGACTACTAGGCTCAACTGGCTCCAGCAAAATTCGGTCGAGATGTCTG
TTGTGCTGGAGACACCAGGCCACGCCCGAACTTTCCTCGGCATATAGATTCGCGCAATCC
AAACTCAAACGTACCCACGTTCCATCTTTGTTCACAACCTAAAAACAAATAAGTAATTTA
TTATAATGAATTTCGTATCCGATCAGAGCGAACCATTCCCAAAAACCAAGACACGTGGCG
GTGGTGGTCAAATATTGAACGGAAATCAAGGAGTCGTGTGGCGTGCAGAGAGCCGTTGT
(5819 bp)

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