SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28410_c1_g1_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.17 TPM:0.23
ORF EntryO_BomoN4EE10298_complete:A_BomoN4EE_TR28410_c1_g1_i1
Sequence
(Nucleotide)
GTTATTGCCTATCATTTATGTATAAAGCAGTCATTGCCGCTTAGTCACGTTTGCCTTTCA
AGCGTCGATATGCTAGATAGCCGATAGAGCAAAATCACAGATGTGGTACAAAAAGCAGTT
TCGCGGCGGAGGCGTGTTATAGGGGCGCGAGTGTGACCACGTTGCGTTTAGAAGCCTTGC
GCGTGCCGACACACGCCGCAGCCGAGCGCGAACTCCTCGCCGGTCGCCGGATGTTGCACG
TGCAGAGGACACTCGTCCGATGTACCCGGCAGCTGTTCACCTTTAGGACCTGCTGGACAT
TGAGGCAACAGATGTCGCGGTATGTGTGTGACGCGCTGGAAGTCGTCGTGGCAGGCGTTG
CAGAAGTGCGACGTGCCGAAGCAGAAGAACACTGCAACCGAACAGCAATACCGGCATTTG
TACTCGAGAAAGTCGGCTCCGTGTTTCGGGCAAGTCCTAGCGCCGGTGACGTCACTGCAA
GCGCCGCACACGAGCTCAGCCGGCTCCCACCAGCCATTCGACTCGGCCTCACAACGAGCC
AGCCCGCCGAAATAGGCCTTGCCACATTTATGACAGACGTAATAAGCATATCTGTCCATG
GCGTAGGAAGCCGGATCGGAAACATTGCGTCCTTTGGTCCCGCCCGGAGCAGACAGGCCC
TCGTACTCGAGTCTCATTAGTGCCTTGCGTTTCACTTCATCACGCAGTTGCCTGATAGGT
GTTAACAACTCTTCAAGGGTCCAGTGGTTTATGTCCTCCTTGCAAATTGGGCACTGCGAG
AACGAGAAACTAATCCTGGGACCGTTCCACTTATTGACGAGCACCTTCCTGCAGCAGTGC
AGATGGAACACATGCCCGCAAGTTAGCTGTATCGCAGGGGCGGCCTGCAAGGGGTCAGTG
AAGCAAATCATGCACATATCGTCCGCGTCCTGTCTCAGTGGCGCTGCCTCACCAGCTGAG
ACGCCCGCGCACCCATGTAGGCACGGCAGACAGGTTTGCTCTCCCCGAACTCCACCGCAC
AGGTGACCGCAAGCGAGGATGACATTACATGCTTCCCGACCATGGTCCTGACATTGTTGA
TCGGCGCAGATATTTCCGATGGTGAGTATGCCGGTAGATTCTCTGGCCCCGCAAAAGCGA
CACGTTCCAGAGGGAGCCACCGGTCCCGAAGCCACGGCCGGTCCCTCAGATGATGGTCCG
GCTTCACAGACTCCACCTTCCATTCCTCTGAACTCGGCTAAGGCTTTCAGCGTACGCCTG
TCGACCAGGAGCAATAGCCAAAACAGTTTCGCGCGTCCACAGCCTTCGTGTATGTCGATG
CGTATAGCGCTCTCCTCCTCCTTGCAGATCTGTCTGTGGTGAGTCCTGGCGGTCCTGTTT
AGGTGCAAGAATCGATCGCATTCAGCACAGAGCGGTCCACAATTGCGGCAGTCTATGACC
GCCGCTGTGGCGCCGTCGTCGTGGTTGGCGCACAGAGGACGAGTCTCGGAGGAAGAGTCT
CGACCACGAGCTCCGCGCCCGTCTCCAGAACTGTTGACGAGATCTAGATGTGATTGTTCA
CACACGCACAGGGAAGCTAGCGCCATCCAGATAGTGGGGGACGCGATGCAAAGCGCCGGC
TGTCTCTCTTTTTCGGATACTTGCGATATGGCGCATACGTAGTTGGCTAATTGGGTACGT
GTCTCTAGGCCCCATGAACCAGCCAATTTATCCTCTGCCATGTCAGATAGAAGTTTAGCT
ACCAAATGTGCGTGTTTTTTGGTAGTCTCGCCTCTCATGAACCAATTACTCGCGGACAAG
GACACCATACTGCCCCCCATCATAACGGTAGCTGGGGCCGATCCACTTGAACCTTTCACC
TTCATTTGAACTGTGATCGCTTTGCCCAAATAGCAAACCAGATGGTCGAGTAAAGTTACC
CTGCTAATCGGATCGGAACCATAATTGACGGCCGCTAACATCTTCTGGGGCGGTAGCTCT
ATGACCAATCGACGTAAGAGCGATATTACCTGTCTTTGTACGCGTTCGCTACCAGTGTGA
AGCAGAGATAACAAGTCAGATAGTAGTTCCGTGCGCTGAGCAAGATGTACTCGACCCACT
GCACTGCCGCTGAGTGCCAATAACAGCGAGAGCATTTCAAAGCAGTAGTTGTCCTGCTGC
GACCCCACGTGTTTGGCGGCTGGCGACTCCTCCCATTCACTATCCGTGGGTTCGACACAA
AGCAGAGTTGTCTCCCAATCATCGCGCACGCGGGCAGTCTCACATCCGATCGCACTTACT
ATATGAGACATCACTTGTCGTTGCAGAGATGTAAGTTTGTGTCCAGCGAATAGGATGCCA
ACAACGTGCTCTCTGAGATCGCTGTCGTCGTTGGCAACTCCATCGTCGATTGCTACCGCG
GCTTCGGCGCTCGCGTCGCTAGACTGCTCCCATTCCAAGAGCTTCCCGAACACCTGAGAA
GTCAACAAGCGGAAAACTCGCAGGGTGTCCGTTTCGCAGAGTCCGTGCAACACTTGCGGC
GCTGTCACGGCGGCTGAATGGAGGAGCGTCGGCGCGCTCAGGACCCGGACCTGGCGGATT
CGAACCGCCGCTTCGGGACCGCGGAGCTCGCATCGAACGCGCAGCGACGTGGTAGACACA
CGTGGTAAAGTATAGCAGAGCCAAGTAGCGACCTTCGGATCGACTTCTATGTCTTGCATG
TGGATCAACTCAGTGGATCCTGAGCTGTACAGGAACGTCATCAGCAGCGTCTTGTTCACA
GTGTCCCTTGTGTTATCGATGTGGACGCACACAATGTGCGGGCGATCATCGTGCGAGCCT
CCCGGGTAAGAGATTTGTATCCACTTTGCTTTGTTCCTGTCTTCGTCGCCTGATTCCCAG
AACGTCTCCGTGCTGCCGTCGGTTAAGGCGCCGGCCATGCCTTGACGTGAAGATACCGTA
ATATCGCACCAGCCAGTCACGTCGGAAGAGCTCCATACATGATTCTCCTGTGCAAGAAAG
CCCGATCGTGGCTGGAGTAGTGGAGCGCCCAGCATCGTATGGCCTGCAGACTCGCGGCAC
TGGCGTGTGGTAGCGATGGTGCTAAAGTACTGACGGAGCCCAGGAACGAGTGGAAAGCAG
CTCGGGCGCCGCGGGCTGCTCGGCCGCCGGGGCAGATGGCGGACGTCGAAGCGGTTGGCG
GGACCGTGCGTATCGGCTCTGCTACTGCATTCTCCTTATTATCTTCAACAATGTGCGGTG
GTGGTACGATCCTGGCAAACTTTTCCAAAGCTGTACAGAACCACCACATAACATCGTGGG
CGCAGATTGGCTGTGTCGCTGAACGAAGCAGCCAATTGAGGGCCTCAAACGCGTATTGTC
TGACAATGTTAATCCTGACGGCCGCGTCCATTTTCTCTCTGTGAGCGGCCAAATCGCGTT
TTGCGAGCACGAAGCTCAGCACCGGCCTTTTCATTATAATGTTGGAGTCTAGTCGAGGGG
CTTCAAATGCGGACAAAGGACAGTCCGTGGCACTCCAATCGCCGCAGCTGAGTAGACCCT
TCAGCGCCTTGCTCGGTTGCGAGAGCAGTGACAATCCACTACCGGTGGCGGTGTCATGCG
AATCGCTACGCAACTTGCGAGTGAGCAGAGGTCGGGCGGCTGCCGCGAGGTCTCCTCCGG
CTTGTCCCATAGACACAGAACGGTGGACTCGGGGCTGGAAACCAAGGCTGGCCTCCGGAG
CGGCGAAATTCGACACTGTAGGAGCGATGGCAGGGGGTTGCGGACGTCCTAGCGAGTGAT
ACTTGGCGGCGTCGTTGTTGTCGTTCTCTTTAGGCTCAGCGCCGAGTGCTTGTAGGCATT
GGAAGGGAGGCGCCGGTTGCCATACGCTCCCCGGCGAAGTCGGGGGGCTTCGACTCAAGT
TCTCGCTCCATGGAGACACGCTTAGAGGTTCTGAATCAGTGAGTGGAGCCAAATCGAGGA
GGAACAAAGCGTTCTCTTTCATCACATTGTGATCAATTCCGGGAATCATGTCTAGTCGTT
CGGTCGACATGTTCATGGCCGACTTCGACTTGGCTTTTAGAGTTTTCTCTCTGCACCTCT
CGCAATAGATGTACCATAGTTCGTATGCTTGGGCGAGTTGTCCACACGCCGTGACCGGGG
TGTCGGCGGTGGCGGCCTGCGGCTCGGCCTCCCTGTAGGTGCCGGCGCGGTCGTATCCAT
GCAGCGTGACGGCGCGGCAGCCCGGGTGGGTGTGGCGCATGTGCGCGGCCAGCGGCGGCG
GCACGTTCGAGCCCCCGCACAGCTCGCACTGTACTACGTACGGGGTCTTGGTCGTCTGAC
GTCGCGCCAGATCCCGTTTGATCTTCTCGGTGGTGGCAGATAGTTGATCTGCATCGTAGA
GAGCGTCCCACAGAGCCACCAGAGCGCGCAATGCGGGAGGCAACACGTTCACTACAGCCG
GAGGGGGAACTGGATCCGTTGAAGTGCTGCATTGCGGTTGCATATAATCTTCATTCATTT
GGACGTCCACATCAGCTTTTCGGGCTCGACTCTCGCTAGCTTCGATTCCGGAGCGAGTTA
ATGTCTCCAAAGTCGAGGGATTGATGTTGAGGTACTGCCCTGCGTTGGAGACTTCAACGG
AGTGCCTCTGGTTACGAGCCAGACTGAAATCGTGAGAGGATCGCGTCACCACTCGTGTCC
CTTGCTTCGGCAGCTGCGGGTGGAACTTTAAAAATGCCGCGCATGCTATTGCGTCATGTA
CGATACCTTCGTGCCATAAAAGTGCTGCGAAAATACATCGAAGAGTTTCGGCCTGCGCCG
GGCTGAGTGCGTGCTTCTTCGGCGGTGGGGGGGCGGGCACGGAGCGAGACGGCGGCGGGG
GCGGGGGGCTGGCGCGTCGATACGGACGAGACCGCGCCGGTGTTCGCTCGCGAGGCACCG
GCATTGGACTGACACGACCATCCTTCGGTCCGGTCGCGAACAAATGCACTGGAACCAGCA
TATCGTCAACGCTCTCCGGTGAAGTCTGTGTGCCGGCTTGTGCCATGCGACTGCCGCAGC
GCTTGTCTTGCTCAGAGTCATCGCCATCCGGTTCGATGTCCGTCTCGAGTATGGTATCAA
CATCTCTGAAGTTGTCGCTCGATCTCTTACTGGGGGGCCACCAGTCGTCATTATTTCCAT
TGCTGCGACGCTGAATAGCCGATGACGGTGAGGAACAGAGATCTTCGCGACTTTGATTTC
TCTTACAAAGCTCCATGGCCTGTGCGATGGCACTTGACCCGCTGTCACTATCGTCGTTTA
GTTCAGTTAGAGGGAGTCTGTGATCGATCCCGCTGGGGCCATCTGCTGCAGCCCCCTCGC
AGTCTTCATCCTGACTCCACGAGAGCGTTTCGTCTCTCATCTCACCTGCGCCCCTCCAGC
CACCTTCCTCTTCTTCCGGTATGGGACTACTAGGCTCAACTGGCTCCAGCAAAATTCGGT
CGAGATGTCTGTTGTGCTGGAGACACCAGGCCACGCCCGAACTTTCCTCGGCATATAGAT
TCGCGCAATCCAAACTCAAACGTACCCACGTTCCATCTTTGTTCACAACCTAAAAACAAA
TAAGTAATTTATTATAATGAATTTCGTATCCGATCAGAGCGAACCATTCCCAAAAACCAA
GACACGTGGCGGTGGTGGTCAAATATTGAACGGAAATCAAGGAGTCGTGTGGCGTGCAGA
GAGCCGTTGT
(5710 bp)

- SilkBase 1999-2023 -