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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28410_c0_g1_i4
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.83 TPM:1.11
ORF EntryO_BomoN4EE10290_complete:A_BomoN4EE_TR28410_c0_g1_i4
Sequence
(Nucleotide)
CATCTTTGTTCACAACCTCCTCCACGAACATTATGTTTTCTCCGGGAGGGATGCGACCTA
ACTCTTCTGACTGCAAGCTAGGGCTGGCCCGGACTCGAAGACCGGCGCTGTTTTCTGCAG
TGAAACTTCGCACCCTCGAGGAAGGTGATGATTGTCCAGCAACTAGCGGTTGAGCTCCGC
GTTCGGCGGGACCTACGTACGTTGATTCGACAACGTCGATTGTTAATTCGTTTGGTACGG
GTAGATCGTCCAGGGTGCATTTGAATACGTAAGTGCCCGGGGACCTCGGGGTCCAGGAAG
CGTAGAATGTACCGTCGAGCTGCTGGCGCACGGTGAGACGCTCCGCCGGCGAGCGTCCTG
TGCCTCCAAACGCTACAGCGTTCGACATCGACCGACCCCAGGCCCCGGCAGTGAAACGAA
TTTCTTCGAACGAAAAGTTCTGGTACGCCTTCATCATACTGATGGCTTGGAAGCACATAT
TGTCTCTTACGGTAGGCTGATATGGTATATCAGGCAAGCCCTCGTCATTACCGGGACCTG
AAGCCCTACTGGCCCGGGCCCCGCTTCCTTCGAGTCGCTGCACAACCACCTCAACTTTAA
GTGCCGGCGAAGCAACGTAGTCTCCGTACTGATCTCTCACGAGAACCGGTAGTATTACCC
TTGTAGCAGGCCTAGCTGGTACAGCCGGTGCCTTCAACTCGCAATTGTTGGGCTCGACGC
GAGATGTTGGCGCCAACCAGCGAGCGAGGCGGCCACCGGCTGTGTTTTCATCGCCCCCAA
CGAAGTCAGACAAAAATTGACGTTCCGTAGATATGCACTGCTGAAGAGATTGGTCATCAA
AAATTTGATGAACTGTTGGAAGTGAAGTCAGATCGAGTCCCCGGGATAGGAAAAGCGTTT
CGCAAGCATCTTGGGGAGTTTCGTCCTCGCCTCCGGTAGGGTTGCCTCCTATCATTGCTT
GAAGCTGTACTTCTAGTAGTGTTGCGAAACTCATCGGAGGTATCTCAAGATCGGGTGCGA
GCAGTTTCGAAGCGCACGCCGCACCGGTGAACATGAGGTCCATCTCTAGGGCGACCAGAC
CTTGCTTCTGCGATGTCAAGTTGGAATCCTCGTAGCCAACGGCCAGACAACGAAAACCGA
AACGGTTCTCTTCGTTGTTAGCTTTATTGTATTCGGTGAGATAATCTGAGGCTGTTTCCA
GTGAAAATATCACTTCGTTTCCCGGCACCAGCAACGACCTTTGCGGCCATTCAGTTGCTA
CGTTGGAGAGCTTAGGTGTGACGCTGACGTAAGTGCAGTTATATTGCATGCACGGGGCGT
CCGTGTCAACTGCTTCTACGTAATCGTCAAAATCGCCTTCCGGCCCCAAATGTACTAGAC
GCTTCTTAAACGGTATATCGGTACGAGGCTCTTCAGTACAATGACACTTGTGTTTCGGTG
CTCCAGCCACAGCGAATACAGTGAGCGTGTCTTCGGGCTGAGCTGTTATACTCCTCGGAT
CCATCTCCAATACAATCCACGACACCGTAGTCGGAAACAGCACTCTCATGTTGGTGACAG
TCGCCTGCTTGTATGGGTGCTCACTTTCGACCCAACTGTAGTATTGGGCCGCGGTCGTGT
TTATATTGGTCTCCTCCACGGAAGGCACGAGTAGATTCATAGCACCCACGTGTGGTAAAA
GTTTCCGGATCATTTCCAATATTTTGATTACGCTCTTTGGATCGTCAAGTCCATCCAGGC
TGGCCAGAGTATAGGGTATGAGTGTATTGATAGCTGGCGATTGTTGCAGCACAGAGGCAT
TCCTCTTGAGATCCTCGGCCGTAAGCTCATTGCGCAAAGTACAAAACAGCTCCGAGCCCC
TCTCCATTACTAAGGACGCCACTCGTAATGTTATAGTACGAAGGGCGGTGACCAGAGAGT
CAGTACTCTCCGAGCTGCAGAGCGAAGTTGTAGACGAACGCGAATAGTAAACGAGGCAAG
GTATCTGTCCTCGAGCCAGAGTAGTTCCATTGAAGCTTAGAGAGCAAGAAGCAAAACGGA
AGGTTGTTCCGTCAGGGCCCTTCACCGAAGGAAGACCGCAGTCACCATTGGCCGTTCGAC
CACCATGATTACATAGTCGTATAGCGTAACGAATCTCTTCTTTCAAAAGTATTGGGCGGT
CAAATTTCAACTGCACCATATCGTGCTGACACTCGGCTCCACTGAAAGCGCCGTGAGCAA
CTTCGACGCTAACCCAACAATGAGCAGGATTCATTTCTTCCGGGGACGACCGTGACTGCC
TGACGTCGTTCAGCAGCTCGATCGAGTATTCGTAGTTACCGGGGCCGCCGTAAACGCAAA
CCCCGACCAACATAACGCCGGACCGATCGACGGTAAAGCATATAGCATCCGGACTTCCGT
TGCCGGTGTTCCAGGCGCGCGACTGATTGACGCGCATAAAACGCGAAGGCGTCACTAAGT
GTTTCACCGAACTAGAGTCCACGTCGTCCCTAATATTGGCAGTGCTGTGGGTAAGTTCGG
CGACTATTCTGACGGTAAGTTTGCAGCAAAACTCGGCGAGTCGTTCGTGTTGCTTGATCT
CGCCGTGATCGTGAGGCTGGTTGCAAGGACGCGTCATCATCTGACGCTTGATCGGAAGAA
GTACAATATCGAGTAGTTTGGTAATCACATCCAACAGATGCCAGTCGCTGAAGTTCTGCT
TCGTTTCAGTCGTCTCTTGAAACTTCGGTGATTCCATATTTCCCGTTCTGGGCGGAATAG
GAGGTGGCTTCTGGGCGTACGATGATCTAGGTACGGTCGCCGATTTCAATGGCATCTCTT
TGATAACCACTTTACTATCGGGGCGCTTATTCTCATGCGTTATGAGATAATTTTGAGTGA
CGGGAACTATGTATTGCAGAACATCTCGCAGACTCCTTGATACACACATCGCGGCACAAG
TAGCCGTCAGCTCACGAATTTGGGCAGGAGGCACTGTGCCCTCCTTTACATAAAATAGCA
GGCTGCACATGTGGTTCCATTTTAAAGTGGGCGTCGGAAAGAATGCGTGAAAACAGGCAG
TGACCGTGTCGTGTGCCTCATTGAAAACTGAATGCATCAGCTCCAACGCAAACTGAACAT
AGCAAACTCGACTAGACCTAATCCTGCCCACTCGTCTTGGGATCCGAGAGCAAGTTGGGG
TACAATCGGCCATTATCATTTGTATTAAATTCCTCACTTCTCCTATGGATTCAAAGTATG
ACATATACTCGTGCGAATTGCGTTTTCTGTTGTTTTGAGGGTATATTTCGTTGATGTAGA
ACTTCACGAGTCTCAGACAAGACCTCACCACGTACACTAATCGCTTTTGCTGCTTCATCA
ACAGCAGTTTTTGGTAGGTAATAGGAATCTGTCCGTTCGTGTCCAAAATGAATTCTTTTA
AAGATGCCCATCCCCAAGTTAATAGTGATATTAAAGATCTGAAGCACGGCACTGTAACTT
TCCTTGATATATTTTTACTGAGAGGAATTATTGGTTCTCCCGGGTCGGTAATCCTCATTG
GAAGATTATGATCGGGCGTTGCAATATTGTACAGGAGGCACGGTATCTGCCCAGCATTAA
CGTCGGTACCGTTGTTCGATTTCTTTGAGGATTTGAAATGGAAACCGACTTCATCATTTA
TTACCATCGCTTGTCCCGAAGAACCACAGTCCGATGATGGACCGTTCATGCAAGCCCACG
CCAAATACCATCGGTTTGCAACTATTGGTACTGGTGTTTCGAACAGTACCGGGAAACGAT
CCCTCGGCGCGCACTCGAATACAATTTCGTCGCTCTCGGCTAACAATTCACCATCAGCCT
CTTGATCTCCGCCGTCAAGTCCAATGTCATATAACTTTATCTTCGCAGTGTAATCCCCAC
GACCCCCAAACAGCCCATAACCGCCTAGCAATATATCGGTGTCGCACATAAACCGTATAG
CTTCAACGGAATGTCCAGAGTATCCCCACCCTCCGCCGTGGCTCTCGAAACGGTTCACGG
TGAGGAAGTCCTCTTTCATGGACGCCTCTGGAGCAGACGCGTTGTCTCGTTTACACTCCA
CTTGACTCAGCTTGTTATCGTGTGCATAGTTCAGGGAGTCGAGACACGCGAGCAGATGCA
GGACCGCGTGCATTCGTGTGATTGAACACTTTGGCGCACACGGTATAGCCAGCTCTTGGC
TCAGAACCGACATGTTCACTAGAGCCACGATATCGGTCGGCTTCTCTTCATTACTGCATG
TCACTTCGAAACTCTCCAAGTTCTTGAAATCTTCCAAGCGCCTCATGTTTCCGCAGCTCG
GATAATCGAAATCATTGTCGTCATCGTAACCGTCAGGGTCATTGTTGCAGCACCTCTGTA
TCTTGTGCGCATCGAATGCTAGTATGTTGTAACATCTTATCACTTGCACCTGAGGATGGT
AGCACCACAGGACATCGTAAAGCGGATCGAGGCACGCGAGTGTGTTTACAAAGTCGACTT
GTTCTGAACCTGTCCAAGCATTACAAGTTCCGTCGTTCTTATTGATGGTCAGACATTTAA
ATGTGTGCTCCGGGCGATTCGGAAGAATCAGAATACAGTTATTGTTGGAAGTAATGGTCG
AGCTGAAAAGCGTATCGGTTTTGATGAGAGCTTGAGAGATTTGCACGAATGTTTGGTCCC
CTGAAGCCGAAATCCAAACGGCCTTGCATGAATACCGCGGACCCAGTCGGGGTACTCTCC
CTGGGGTAGCGTACCATATCAGACCTCTCTCCGAGCGAGGCGCGTCGTCATCGCAAGGAC
GACCGAGTGACCCTTTCTGATAACTGCCAAAAGTGAAAAGTTCTCCATCTCTAGTCAGGA
CAGCAGTGTGATTACTGCCAGCCGCGATGGCTGAAGCTTTAGGTACCTTTACTCGGATTA
TTCGATGATGTGTTGATATATCGCCTGCGCCCAACTGACCAAACTGGTTTGAGCCGAATG
TCAAGACTTCACCATGTTCGGTGAGTAGCACAGTATGATGAAGCCCACACGCAACGGCCG
CGACGCGGTGTCCTCCGGGCACAGCCACGCGAGCAGGCGGAAGACAACTCACTTTGAAGC
TGGTGTCTCTATCGTCTAGACCGCTTGAATGTCCCTCGTATTGCGTATACCTCGATGGCT
CCGGGTCATTCTTAGCTTCTGCTGCGGTCGATGTCTCGGCGTCCGCGTCGTCGTCGGCGT
CCGAGACACGCTCGGTACATTCGGCGCGTCCGGCCGCGGCAAACGCGTCCGCACATCGAC
GGCAAATTCCACAAACGCTGCAGCCGCTATCGCCTTCACCGCACCCACACTTTTCTCCGG
GCACTCTGTTTGGTAAATGAGAGCAATGGCACGCATTAGAGAATCCCGTGCACTCGCAGC
AGAGCACGCACACGCGACAATAGTCCGTCGTCCAGCTATGCGGCGTCTGGCATATGCGGG
CTTCGTCTTTGTTCTCGTCATGATGACGAGAATGAGACGGTTTTTCTTTTGTATATCCAA
ATTCGCGACCGCACTGTCCCTTATTGTTTATACCAAGGGTATAGACCAGTCCGAAGCTCG
TTAAAACAACTGCATGAGCTTTCCCTAGCGCCACCTGTATGACTCGTTCGTGTCTGAGAC
CGAGAACTAGTCCCGACGAATCGCAATGCAGGGTGTCTTTTCCGAACATTAGTAAGAGAC
CTTGACGCGTTACCAAAGCGGTGGAGCCATAGTTACAAGCCGCATAAACTATGTGATGTC
CTTCAGCCTTGAATATCTTTTTAGGCCTTGTAGGTTTTGGTGTCCGTCGATGTCTGATCG
CATCACCATCTTCTCCTCGTCTTGCCACACCGGTAAACAAAGCCGTGCCGTTGTCTAGTA
CTAATATAGCGTGTACGCCCTCATGACCGACGGCCACCTGAGCAATTTTTGCTTTTTTTG
CATTCGGCGCTTCGTTCTTCGTGACTGTTGTTTCTTTCATTAAAGTCCATTTTTTTGTGT
TAGCAGATGCCGCTTTGTAACCGAGACTACTGCCTTTGCCGCAGTAATATACCTTTCCTG
ATACAGTTGCTAGCAGTCCAAATTCTTGTCCCCCACAAATACTCAAGAGGGGGTCGTCGT
CATTATCATCAAGTTGTGTTGCAACCGGTACGTCCATATCAAGGGGCCGACGTGGCAGGA
TGTCTTCGAATGGCGCCCGACCCATTACTAACGTTCTACGCCTTAATAAGTGCACATTGA
ATTCTTTCTGTGAAGTCAAGATGTTTGTTCCTTCCTGACGACTTGCAGTGTCCACACTAT
ACATTCGTATCGTCAACGTGTCAAATTTTGTGAGTAAGATTAGCCCAATTTGATTGCCAT
CACTAAACACGGCGGATTTAGATTCAATCGGTGCTGGTAGCCCTGGATCTAATTTGATTG
TTTGTCGTACTTCTAGTGTATCTCTATCTATTTCGTAGATATCAGTCTTTTTTCTACCAA
TTCTTACAAACAACTTAGTTCTACAATACCCAAGCCATCCATGTCGCTCACCCGCGAAAA
AATCTGGTTTATAAGAATAAACATGTTGCTTTATAGAACTGCCATAACCAGAGCCAATCT
TCAACAATCCTTTGGAAGTGAAAACATAGAGATAACAACCGTCCGATACAAGAGACCGTA
CAACTAGGTCACCCGAACCAGACGTTAACGAAACTGGAAGATCTACAGGAAAACTGTTGA
TGAGCGACAGTGATGGTACACCGTACTGCAACCACTGGTTACGGGATGGAGAACCCAGAA
TAACGGACTGAACGCTTCGTTGTAGCGTGGTCAGATTTGCAGGAGTCTTCAAGTATTGGT
CTAAGTACAATGGAGCACACATTGCCAAGGAGGCCGCTGCATTTAATATTAATTCAGCTT
CGCCACGTGCGACTGACAATGCAATTAAACAAGAGCTGCTTAAAGCTGTGAGTTTTGAAG
GATGTTCAGAACGACCACTAGGGCTCACACCACTAGACACTTCAACTAGCATAGAATGTA
TATTAAAGATCATATCGGTTGGTTCTTGCGAAAGCTCTTCAGGAGAATGCCCTTGCAGTA
CATCTAAGAGTGCTTTTAACGCTTGCTCGCAAAAATGCGGATTGGTTATCTTAGCTTGTG
AAATAAGAGAGAAAACTGTACGAAGACCTACTCCTGTGATCTTAGGCAATTTGTTGATAG
GAACTGGGGAAACACCTTCTTCATTGTCGCTGTCATCAGATGCCTCTGAAGAATTACTTT
GGAGATTTCTCCAACGGGCCAATATGGATCGCCTAACCGTAGCATAAACAGCAAATTGAG
ATGGATTGCCCAGAAGAGCAGGTGCGTAGCATATTGTAAGAGTACCTCCAGCTTTTAGTC
TGTGGAACTTATCTTTTTTCCCAATTTTCTTATGAGTCTTTTTGTCATTTTTTCTTGTGC
CACTCCAGCATAAGGCTCTAAAATACTGTCTGTAGTTCTCGGGATCTATGCAGCTTAGCT
CTGGTGTTGGTACCCTGAGTGCCATGTTTCCAGTGAGATGATTTATGTCTGTCTATAAGA
TGGTGACATTTTCGTTATTTAACACACATATTCACTTAAAGTTCAAAAATGTCTTTCGAC
CAAGTATGTACCTGGATAGTGGATGGATACCTAGGTAGGTTCCTACCAGCTACCTACTCA
ACGTCAAAAATCAATAACAAAATTGAGTGCTACCAGGAATTACGAGTTAAAAATGTTAGC
TGCTTCAGAA
(7750 bp)

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